RNA–Protein interactions for RNA: ENST00000612394.4

PCDH15-224, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-224ENST00000612394 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
PCDH15-224ENST00000612394 NISCHQ9Y2I1 1504 aa15.47■□□□□ 0.07
PCDH15-224ENST00000612394 SUPT5HO00267 1087 aaKnown RBP14.83□□□□□ -0.04
PCDH15-224ENST00000612394 SHROOM4Q9ULL8 1493 aa14.6□□□□□ -0.07
PCDH15-224ENST00000612394 FAM9AQ8IZU1 332 aaPredicted RBP14.42□□□□□ -0.1
PCDH15-224ENST00000612394 APLP2Q06481 763 aa14.38□□□□□ -0.11
PCDH15-224ENST00000612394 PELP1Q8IZL8 1130 aaKnown RBP14.26□□□□□ -0.13
PCDH15-224ENST00000612394 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
PCDH15-224ENST00000612394 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
PCDH15-224ENST00000612394 ZEB1P37275 1124 aaPredicted RBP13.87□□□□□ -0.19
PCDH15-224ENST00000612394 UBTFP17480 764 aaKnown RBP13.73□□□□□ -0.21
PCDH15-224ENST00000612394 ATP1B4Q9UN42 357 aaPredicted RBP13.71□□□□□ -0.21
PCDH15-224ENST00000612394 TTBK1Q5TCY1 1321 aaPredicted RBP13.69□□□□□ -0.22
PCDH15-224ENST00000612394 PCGF6Q9BYE7 350 aa13.69□□□□□ -0.22
PCDH15-224ENST00000612394 RANGAP1P46060 587 aaPredicted RBP13.68□□□□□ -0.22
PCDH15-224ENST00000612394 CENPBP07199 599 aaPredicted RBP13.66□□□□□ -0.22
PCDH15-224ENST00000612394 CCER1Q8TC90 406 aaPredicted RBP13.64□□□□□ -0.23
PCDH15-224ENST00000612394 ERICH6Q7L0X2 663 aa13.48□□□□□ -0.25
PCDH15-224ENST00000612394 NEFLP07196 543 aa13.42□□□□□ -0.26
PCDH15-224ENST00000612394 TRIM26Q12899 539 aaPredicted RBP13.37□□□□□ -0.27
PCDH15-224ENST00000612394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.33□□□□□ -0.28
PCDH15-224ENST00000612394 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.28
PCDH15-224ENST00000612394 MYT1LQ9UL68 1186 aa13.31□□□□□ -0.28
PCDH15-224ENST00000612394 ABCC9O60706 1549 aa13.25□□□□□ -0.29
PCDH15-224ENST00000612394 CHIC1Q5VXU3 224 aa13.18□□□□□ -0.3
PCDH15-224ENST00000612394 ITGAEP38570 1179 aa13.14□□□□□ -0.31
PCDH15-224ENST00000612394 PPARGC1BQ86YN6 1023 aaKnown RBP13.13□□□□□ -0.31
PCDH15-224ENST00000612394 YTHDC1Q96MU7 727 aaKnown RBP13.11□□□□□ -0.31
PCDH15-224ENST00000612394 MYT1Q01538 1121 aa13.08□□□□□ -0.32
PCDH15-224ENST00000612394 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
PCDH15-224ENST00000612394 POLR3GLQ9BT43 218 aa13.04□□□□□ -0.32
PCDH15-224ENST00000612394 DAXXQ9UER7 740 aaPredicted RBP13.03□□□□□ -0.32
PCDH15-224ENST00000612394 HRCP23327 699 aa13.01□□□□□ -0.33
PCDH15-224ENST00000612394 LOC105371045A0A1W2PR82 267 aa13□□□□□ -0.33
PCDH15-224ENST00000612394 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.33
PCDH15-224ENST00000612394 TRIM52Q96A61 297 aa12.92□□□□□ -0.34
PCDH15-224ENST00000612394 CCDC180Q9P1Z9 1646 aa12.91□□□□□ -0.34
PCDH15-224ENST00000612394 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
PCDH15-224ENST00000612394 ZCCHC6Q5VYS8 1495 aaKnown RBP12.82□□□□□ -0.36
PCDH15-224ENST00000612394 FBLN2P98095 1184 aa12.81□□□□□ -0.36
PCDH15-224ENST00000612394 SCRIBQ14160 1630 aa12.8□□□□□ -0.36
PCDH15-224ENST00000612394 CDK11AQ9UQ88 783 aaPredicted RBP12.8□□□□□ -0.36
PCDH15-224ENST00000612394 DIEXFQ68CQ4 756 aaKnown RBP12.77□□□□□ -0.37
PCDH15-224ENST00000612394 CSRNP3Q8WYN3 585 aa12.76□□□□□ -0.37
PCDH15-224ENST00000612394 NEUROD1Q13562 356 aa12.73□□□□□ -0.37
PCDH15-224ENST00000612394 ANP32CO43423 234 aa12.72□□□□□ -0.37
PCDH15-224ENST00000612394 CLSPNQ9HAW4 1339 aa12.72□□□□□ -0.37
PCDH15-224ENST00000612394 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
PCDH15-224ENST00000612394 CNGB1Q14028 1251 aaPredicted RBP12.71□□□□□ -0.37
PCDH15-224ENST00000612394 RB1CC1Q8TDY2 1594 aa12.69□□□□□ -0.38
PCDH15-224ENST00000612394 NEFMP07197 916 aa12.67□□□□□ -0.38
PCDH15-224ENST00000612394 ZBTB47Q9UFB7 747 aaPredicted RBP12.66□□□□□ -0.38
PCDH15-224ENST00000612394 ZNF326Q5BKZ1 582 aaKnown RBP12.64□□□□□ -0.39
PCDH15-224ENST00000612394 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
PCDH15-224ENST00000612394 ESF1Q9H501 851 aaKnown RBP12.6□□□□□ -0.39
PCDH15-224ENST00000612394 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
PCDH15-224ENST00000612394 BCANQ96GW7 911 aa12.59□□□□□ -0.39
PCDH15-224ENST00000612394 P3H3Q8IVL6 736 aa12.58□□□□□ -0.39
PCDH15-224ENST00000612394 ZNF777Q9ULD5 760 aaPredicted RBP12.57□□□□□ -0.4
PCDH15-224ENST00000612394 NACADO15069 1562 aa12.56□□□□□ -0.4
PCDH15-224ENST00000612394 CANXP27824 592 aaKnown RBP12.54□□□□□ -0.4
PCDH15-224ENST00000612394 ACIN1Q9UKV3 1341 aaKnown RBP12.53□□□□□ -0.4
PCDH15-224ENST00000612394 TONSLQ96HA7 1378 aa12.49□□□□□ -0.41
PCDH15-224ENST00000612394 DCAF1Q9Y4B6 1507 aa12.49□□□□□ -0.41
PCDH15-224ENST00000612394 ARID3CA6NKF2 412 aa12.49□□□□□ -0.41
PCDH15-224ENST00000612394 EEA1Q15075 1411 aa12.48□□□□□ -0.41
PCDH15-224ENST00000612394 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
PCDH15-224ENST00000612394 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
PCDH15-224ENST00000612394 CHMP7Q8WUX9 453 aaPredicted RBP12.41□□□□□ -0.42
PCDH15-224ENST00000612394 RSF1Q96T23 1441 aaPredicted RBP12.41□□□□□ -0.42
PCDH15-224ENST00000612394 TSPY4P0CV99 314 aa12.4□□□□□ -0.42
PCDH15-224ENST00000612394 TSPY10P0CW01 314 aa12.4□□□□□ -0.42
PCDH15-224ENST00000612394 MTUS2Q5JR59 1369 aa12.39□□□□□ -0.43
PCDH15-224ENST00000612394 BAZ1BQ9UIG0 1483 aaKnown RBP12.38□□□□□ -0.43
PCDH15-224ENST00000612394 CHGAP10645 457 aaKnown RBP12.37□□□□□ -0.43
PCDH15-224ENST00000612394 GOLGA3Q08378 1498 aa12.36□□□□□ -0.43
PCDH15-224ENST00000612394 CLIP1P30622 1438 aa12.35□□□□□ -0.43
PCDH15-224ENST00000612394 GTF3C3Q9Y5Q9 886 aa12.32□□□□□ -0.44
PCDH15-224ENST00000612394 ANP32AP39687 249 aaKnown RBP12.31□□□□□ -0.44
PCDH15-224ENST00000612394 KIF27Q86VH2 1401 aa12.29□□□□□ -0.44
PCDH15-224ENST00000612394 BAZ1AQ9NRL2 1556 aaPredicted RBP12.29□□□□□ -0.44
PCDH15-224ENST00000612394 WRNQ14191 1432 aaPredicted RBP eCLIP12.29□□□□□ -0.44
PCDH15-224ENST00000612394 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.28□□□□□ -0.44
PCDH15-224ENST00000612394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.27□□□□□ -0.45
PCDH15-224ENST00000612394 PLEKHD1A6NEE1 506 aa12.27□□□□□ -0.45
PCDH15-224ENST00000612394 CEP164Q9UPV0 1460 aa12.25□□□□□ -0.45
PCDH15-224ENST00000612394 UPF2Q9HAU5 1272 aaKnown RBP12.25□□□□□ -0.45
PCDH15-224ENST00000612394 CHIC2Q9UKJ5 165 aa12.25□□□□□ -0.45
PCDH15-224ENST00000612394 WDR43Q15061 677 aaKnown RBP eCLIP12.24□□□□□ -0.45
PCDH15-224ENST00000612394 ERCC6Q03468 1493 aa12.22□□□□□ -0.45
PCDH15-224ENST00000612394 TMC1Q8TDI8 760 aa12.21□□□□□ -0.46
PCDH15-224ENST00000612394 CEP162Q5TB80 1403 aa12.2□□□□□ -0.46
PCDH15-224ENST00000612394 TNIKQ9UKE5 1360 aa12.19□□□□□ -0.46
PCDH15-224ENST00000612394 HNRNPUQ00839 825 aaKnown RBP eCLIP12.18□□□□□ -0.46
PCDH15-224ENST00000612394 CDCA8Q53HL2 280 aa12.18□□□□□ -0.46
PCDH15-224ENST00000612394 ANP32BQ92688 251 aaKnown RBP12.17□□□□□ -0.46
PCDH15-224ENST00000612394 EIF4G2P78344 907 aaKnown RBP eCLIP12.16□□□□□ -0.46
PCDH15-224ENST00000612394 PPP1R15AO75807 674 aaPredicted RBP12.16□□□□□ -0.46
PCDH15-224ENST00000612394 BCL11AQ9H165 835 aa12.16□□□□□ -0.46
PCDH15-224ENST00000612394 DDX10Q13206 875 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms