RNA–Protein interactions for RNA: ENST00000611549.4

RAP1GAP-213, Transcript of RAP1 GTPase activating protein, humanhuman

TSL 5

Gene RAP1GAP, Length 4,294 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GAP-213ENST00000611549 ATAD2BQ9ULI0 1458 aa18.39■□□□□ 0.53
RAP1GAP-213ENST00000611549 SCAF1Q9H7N4 1312 aaKnown RBP18.38■□□□□ 0.53
RAP1GAP-213ENST00000611549 KANK4Q5T7N3 995 aaPredicted RBP18.37■□□□□ 0.53
RAP1GAP-213ENST00000611549 FHAD1B1AJZ9 1412 aa18.37■□□□□ 0.53
RAP1GAP-213ENST00000611549 CHGAP10645 457 aaKnown RBP18.37■□□□□ 0.53
RAP1GAP-213ENST00000611549 SMARCA4P51532 1647 aa18.37■□□□□ 0.53
RAP1GAP-213ENST00000611549 EIF4G2P78344 907 aaKnown RBP eCLIP18.36■□□□□ 0.535e-7■■■■□ 19.6
RAP1GAP-213ENST00000611549 SIN3AQ96ST3 1273 aa18.36■□□□□ 0.53
RAP1GAP-213ENST00000611549 CFDP1Q9UEE9 299 aaPredicted RBP18.35■□□□□ 0.53
RAP1GAP-213ENST00000611549 KCNH8Q96L42 1107 aa18.32■□□□□ 0.52
RAP1GAP-213ENST00000611549 MRS2Q9HD23 443 aa18.29■□□□□ 0.52
RAP1GAP-213ENST00000611549 RUSC2Q8N2Y8 1516 aa18.28■□□□□ 0.52
RAP1GAP-213ENST00000611549 TMC1Q8TDI8 760 aa18.28■□□□□ 0.52
RAP1GAP-213ENST00000611549 CADPSQ9ULU8 1353 aa18.28■□□□□ 0.52
RAP1GAP-213ENST00000611549 RTL5Q5HYW3 569 aaPredicted RBP18.26■□□□□ 0.51
RAP1GAP-213ENST00000611549 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
RAP1GAP-213ENST00000611549 SALL2Q9Y467 1007 aaPredicted RBP18.24■□□□□ 0.51
RAP1GAP-213ENST00000611549 ERCC6Q03468 1493 aa18.23■□□□□ 0.51
RAP1GAP-213ENST00000611549 RAPGEF2Q9Y4G8 1499 aa18.22■□□□□ 0.51
RAP1GAP-213ENST00000611549 CANXP27824 592 aaKnown RBP18.22■□□□□ 0.51
RAP1GAP-213ENST00000611549 PDS5BQ9NTI5 1447 aa18.2■□□□□ 0.5
RAP1GAP-213ENST00000611549 RGL3Q3MIN7 710 aa18.19■□□□□ 0.5
RAP1GAP-213ENST00000611549 ESF1Q9H501 851 aaKnown RBP18.19■□□□□ 0.5
RAP1GAP-213ENST00000611549 STAG3Q9UJ98 1225 aa18.19■□□□□ 0.5
RAP1GAP-213ENST00000611549 EIF4G1Q04637 1599 aaKnown RBP18.19■□□□□ 0.5
RAP1GAP-213ENST00000611549 NEFMP07197 916 aa18.18■□□□□ 0.5
RAP1GAP-213ENST00000611549 SETD5Q9C0A6 1442 aa18.15■□□□□ 0.5
RAP1GAP-213ENST00000611549 TIMELESSQ9UNS1 1208 aa18.14■□□□□ 0.49
RAP1GAP-213ENST00000611549 ARHGAP35Q9NRY4 1499 aa18.11■□□□□ 0.49
RAP1GAP-213ENST00000611549 FMN1Q68DA7 1419 aa18.09■□□□□ 0.49
RAP1GAP-213ENST00000611549 IRX6P78412 446 aaPredicted RBP18.08■□□□□ 0.49
RAP1GAP-213ENST00000611549 RAB3GAP2Q9H2M9 1393 aa18.08■□□□□ 0.49
RAP1GAP-213ENST00000611549 CARD11Q9BXL7 1154 aa18.07■□□□□ 0.48
RAP1GAP-213ENST00000611549 ZBTB47Q9UFB7 747 aaPredicted RBP18.06■□□□□ 0.48
RAP1GAP-213ENST00000611549 ANP32AP39687 249 aaKnown RBP18.05■□□□□ 0.48
RAP1GAP-213ENST00000611549 CCDC136Q96JN2 1154 aa18.05■□□□□ 0.48
RAP1GAP-213ENST00000611549 WDR43Q15061 677 aaKnown RBP eCLIP18.04■□□□□ 0.48
RAP1GAP-213ENST00000611549 FHOD3Q2V2M9 1422 aa18.04■□□□□ 0.48
RAP1GAP-213ENST00000611549 BCL11AQ9H165 835 aa18.03■□□□□ 0.48
RAP1GAP-213ENST00000611549 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
RAP1GAP-213ENST00000611549 NPM2Q86SE8 214 aaKnown RBP18.01■□□□□ 0.47
RAP1GAP-213ENST00000611549 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
RAP1GAP-213ENST00000611549 FANCD2Q9BXW9 1451 aa17.99■□□□□ 0.47
RAP1GAP-213ENST00000611549 SENP3-EIF4A1A0A087X0R7 540 aa17.98■□□□□ 0.47
RAP1GAP-213ENST00000611549 FOXD1Q16676 465 aa17.97■□□□□ 0.47
RAP1GAP-213ENST00000611549 NCAPD3P42695 1498 aa17.96■□□□□ 0.47
RAP1GAP-213ENST00000611549 IGF1RP08069 1367 aa17.96■□□□□ 0.47
RAP1GAP-213ENST00000611549 SENP3Q9H4L4 574 aaPredicted RBP17.95■□□□□ 0.46
RAP1GAP-213ENST00000611549 CARMIL2Q6F5E8 1435 aa17.95■□□□□ 0.46
RAP1GAP-213ENST00000611549 DCAF11Q8TEB1 546 aa17.94■□□□□ 0.46
RAP1GAP-213ENST00000611549 SUPT16HQ9Y5B9 1047 aaKnown RBP17.94■□□□□ 0.46
RAP1GAP-213ENST00000611549 PPP1R15AO75807 674 aaPredicted RBP17.93■□□□□ 0.46
RAP1GAP-213ENST00000611549 MPHOSPH9Q99550 1183 aa17.92■□□□□ 0.46
RAP1GAP-213ENST00000611549 PKD2Q13563 968 aa17.92■□□□□ 0.46
RAP1GAP-213ENST00000611549 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.92■□□□□ 0.46
RAP1GAP-213ENST00000611549 HSPA5P11021 654 aaKnown RBP17.9■□□□□ 0.46
RAP1GAP-213ENST00000611549 CDCA8Q53HL2 280 aa17.89■□□□□ 0.46
RAP1GAP-213ENST00000611549 KNSTRNQ9Y448 316 aa17.89■□□□□ 0.45
RAP1GAP-213ENST00000611549 DHX57Q6P158 1386 aaKnown RBP17.88■□□□□ 0.45
RAP1GAP-213ENST00000611549 FGD5Q6ZNL6 1462 aa17.88■□□□□ 0.45
RAP1GAP-213ENST00000611549 JPH4Q96JJ6 628 aa17.86■□□□□ 0.45
RAP1GAP-213ENST00000611549 CCER2I3L3R5 266 aa17.85■□□□□ 0.45
RAP1GAP-213ENST00000611549 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
RAP1GAP-213ENST00000611549 L3MBTL2Q969R5 705 aa17.81■□□□□ 0.44
RAP1GAP-213ENST00000611549 NUP155O75694 1391 aa17.81■□□□□ 0.44
RAP1GAP-213ENST00000611549 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
RAP1GAP-213ENST00000611549 KIF21BO75037 1637 aa17.77■□□□□ 0.43
RAP1GAP-213ENST00000611549 CC2D1BQ5T0F9 858 aaKnown RBP17.76■□□□□ 0.43
RAP1GAP-213ENST00000611549 EFCAB2Q5VUJ9 269 aa17.76■□□□□ 0.43
RAP1GAP-213ENST00000611549 CCDC18Q5T9S5 1454 aa17.76■□□□□ 0.43
RAP1GAP-213ENST00000611549 SYNJ1O43426 1573 aa17.76■□□□□ 0.43
RAP1GAP-213ENST00000611549 HNRNPMP52272 730 aaKnown RBP eCLIP17.76■□□□□ 0.436e-7■■■■■ 40.6
RAP1GAP-213ENST00000611549 TMF1P82094 1093 aa17.76■□□□□ 0.43
RAP1GAP-213ENST00000611549 CFTRP13569 1480 aa17.75■□□□□ 0.43
RAP1GAP-213ENST00000611549 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
RAP1GAP-213ENST00000611549 UPF2Q9HAU5 1272 aaKnown RBP17.75■□□□□ 0.43
RAP1GAP-213ENST00000611549 CFAP53Q96M91 514 aa17.72■□□□□ 0.43
RAP1GAP-213ENST00000611549 KANK1Q14678 1352 aa17.71■□□□□ 0.43
RAP1GAP-213ENST00000611549 PPP4R2Q9NY27 417 aa17.7■□□□□ 0.42
RAP1GAP-213ENST00000611549 NEUROD2Q15784 382 aa17.69■□□□□ 0.42
RAP1GAP-213ENST00000611549 GGT6Q6P531 493 aa17.69■□□□□ 0.42
RAP1GAP-213ENST00000611549 RSPH4AQ5TD94 716 aa17.68■□□□□ 0.42
RAP1GAP-213ENST00000611549 ARID4BQ4LE39 1312 aaPredicted RBP17.68■□□□□ 0.42
RAP1GAP-213ENST00000611549 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
RAP1GAP-213ENST00000611549 TNNT2P45379 298 aaPredicted RBP17.66■□□□□ 0.42
RAP1GAP-213ENST00000611549 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
RAP1GAP-213ENST00000611549 POGKQ9P215 609 aa17.66■□□□□ 0.42
RAP1GAP-213ENST00000611549 PPM1GO15355 546 aaPredicted RBP17.65■□□□□ 0.42
RAP1GAP-213ENST00000611549 PRXQ9BXM0 1461 aa17.64■□□□□ 0.41
RAP1GAP-213ENST00000611549 HSP90AA1P07900 732 aaKnown RBP17.63■□□□□ 0.41
RAP1GAP-213ENST00000611549 B4GALNT3Q6L9W6 998 aa17.63■□□□□ 0.41
RAP1GAP-213ENST00000611549 ERICH3Q5RHP9 1530 aa17.63■□□□□ 0.41
RAP1GAP-213ENST00000611549 NBR1Q14596 966 aa17.63■□□□□ 0.41
RAP1GAP-213ENST00000611549 ROCK2O75116 1388 aaKnown RBP17.62■□□□□ 0.41
RAP1GAP-213ENST00000611549 AQRO60306 1485 aaKnown RBP eCLIP17.61■□□□□ 0.415e-7■■■■■ 33.3
RAP1GAP-213ENST00000611549 LRRC9Q6ZRR7 1453 aa17.61■□□□□ 0.41
RAP1GAP-213ENST00000611549 KIF3BO15066 747 aa17.61■□□□□ 0.41
RAP1GAP-213ENST00000611549 FGD6Q6ZV73 1430 aa17.6■□□□□ 0.41
RAP1GAP-213ENST00000611549 PTPRGP23470 1445 aa17.59■□□□□ 0.41
RAP1GAP-213ENST00000611549 NUDCQ9Y266 331 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms