RNA–Protein interactions for RNA: ENST00000611379.1

TRIM46-211, Transcript of tripartite motif containing 46, humanhuman

TSL 1 (best) BASIC

Gene TRIM46, Length 3,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-211ENST00000611379 NEUROD1Q13562 356 aa23.46■■□□□ 1.35
TRIM46-211ENST00000611379 LAMC3Q9Y6N6 1575 aa23.46■■□□□ 1.35
TRIM46-211ENST00000611379 URB2Q14146 1524 aaKnown RBP23.45■■□□□ 1.34
TRIM46-211ENST00000611379 TDRD9Q8NDG6 1382 aaKnown RBP23.44■■□□□ 1.34
TRIM46-211ENST00000611379 MAP3K1Q13233 1512 aa23.44■■□□□ 1.34
TRIM46-211ENST00000611379 CENPBP07199 599 aaPredicted RBP23.44■■□□□ 1.34
TRIM46-211ENST00000611379 FHOD3Q2V2M9 1422 aa23.44■■□□□ 1.34
TRIM46-211ENST00000611379 LRRC9Q6ZRR7 1453 aa23.43■■□□□ 1.34
TRIM46-211ENST00000611379 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
TRIM46-211ENST00000611379 FAM50AQ14320 339 aaKnown RBP23.4■■□□□ 1.34
TRIM46-211ENST00000611379 PHLDB1Q86UU1 1377 aa23.38■■□□□ 1.33
TRIM46-211ENST00000611379 MIER1Q8N108 512 aa23.36■■□□□ 1.33
TRIM46-211ENST00000611379 CUL7Q14999 1698 aa23.36■■□□□ 1.33
TRIM46-211ENST00000611379 PCF11O94913 1555 aaKnown RBP23.35■■□□□ 1.33
TRIM46-211ENST00000611379 RAB3GAP2Q9H2M9 1393 aa23.33■■□□□ 1.32
TRIM46-211ENST00000611379 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
TRIM46-211ENST00000611379 EFCAB5A4FU69 1503 aa23.31■■□□□ 1.32
TRIM46-211ENST00000611379 YTHDC1Q96MU7 727 aaKnown RBP23.31■■□□□ 1.32
TRIM46-211ENST00000611379 CASKIN1Q8WXD9 1431 aa23.28■■□□□ 1.32
TRIM46-211ENST00000611379 FYCO1Q9BQS8 1478 aa23.28■■□□□ 1.32
TRIM46-211ENST00000611379 FMN1Q68DA7 1419 aa23.25■■□□□ 1.31
TRIM46-211ENST00000611379 SETD5Q9C0A6 1442 aa23.25■■□□□ 1.31
TRIM46-211ENST00000611379 WDR97A6NE52 1622 aa23.24■■□□□ 1.31
TRIM46-211ENST00000611379 CFAP43Q8NDM7 1665 aa23.24■■□□□ 1.31
TRIM46-211ENST00000611379 CTTNBP2Q8WZ74 1663 aa23.24■■□□□ 1.31
TRIM46-211ENST00000611379 AQRO60306 1485 aaKnown RBP eCLIP23.23■■□□□ 1.31
TRIM46-211ENST00000611379 ABCA5Q8WWZ7 1642 aa23.22■■□□□ 1.31
TRIM46-211ENST00000611379 GTF3C3Q9Y5Q9 886 aa23.22■■□□□ 1.31
TRIM46-211ENST00000611379 KIF21AQ7Z4S6 1674 aa23.19■■□□□ 1.3
TRIM46-211ENST00000611379 MTUS2Q5JR59 1369 aa23.17■■□□□ 1.3
TRIM46-211ENST00000611379 SNAPC4Q5SXM2 1469 aa23.12■■□□□ 1.29
TRIM46-211ENST00000611379 MAPKBP1O60336 1514 aa23.11■■□□□ 1.29
TRIM46-211ENST00000611379 TARBP1Q13395 1621 aaKnown RBP23.09■■□□□ 1.29
TRIM46-211ENST00000611379 SIN3AQ96ST3 1273 aa23.09■■□□□ 1.29
TRIM46-211ENST00000611379 SAMD9Q5K651 1589 aa23.07■■□□□ 1.28
TRIM46-211ENST00000611379 FGD6Q6ZV73 1430 aa23.07■■□□□ 1.28
TRIM46-211ENST00000611379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.06■■□□□ 1.28
TRIM46-211ENST00000611379 GRIN2BQ13224 1484 aa23.02■■□□□ 1.28
TRIM46-211ENST00000611379 MRC2Q9UBG0 1479 aa23.02■■□□□ 1.28
TRIM46-211ENST00000611379 NCOA2Q15596 1464 aa22.98■■□□□ 1.27
TRIM46-211ENST00000611379 MYOM3Q5VTT5 1437 aa22.95■■□□□ 1.26
TRIM46-211ENST00000611379 ARID3CA6NKF2 412 aa22.94■■□□□ 1.26
TRIM46-211ENST00000611379 PBRM1Q86U86 1689 aa22.93■■□□□ 1.26
TRIM46-211ENST00000611379 PTPRKQ15262 1439 aa22.92■■□□□ 1.26
TRIM46-211ENST00000611379 LRRIQ1Q96JM4 1722 aa22.91■■□□□ 1.26
TRIM46-211ENST00000611379 THOC2Q8NI27 1593 aaKnown RBP22.91■■□□□ 1.26
TRIM46-211ENST00000611379 IQGAP2Q13576 1575 aa22.9■■□□□ 1.26
TRIM46-211ENST00000611379 TIMELESSQ9UNS1 1208 aa22.9■■□□□ 1.26
TRIM46-211ENST00000611379 EHBP1L1Q8N3D4 1523 aa22.89■■□□□ 1.26
TRIM46-211ENST00000611379 ZNF608Q9ULD9 1512 aaPredicted RBP22.89■■□□□ 1.26
TRIM46-211ENST00000611379 ADAMTS12P58397 1594 aa22.89■■□□□ 1.26
TRIM46-211ENST00000611379 CCDC18Q5T9S5 1454 aa22.88■■□□□ 1.25
TRIM46-211ENST00000611379 SUPT6HQ7KZ85 1726 aaKnown RBP22.87■■□□□ 1.25
TRIM46-211ENST00000611379 HFM1A2PYH4 1435 aa22.87■■□□□ 1.25
TRIM46-211ENST00000611379 IFT140Q96RY7 1462 aa22.86■■□□□ 1.25
TRIM46-211ENST00000611379 CHIC2Q9UKJ5 165 aa22.85■■□□□ 1.25
TRIM46-211ENST00000611379 MAGI3Q5TCQ9 1506 aa22.85■■□□□ 1.25
TRIM46-211ENST00000611379 PPP1R15AO75807 674 aaPredicted RBP22.84■■□□□ 1.25
TRIM46-211ENST00000611379 RRP7BPQ9NSQ0 103 aa22.83■■□□□ 1.24
TRIM46-211ENST00000611379 UGGT2Q9NYU1 1516 aa22.82■■□□□ 1.24
TRIM46-211ENST00000611379 EPRSP07814 1512 aaKnown RBP22.82■■□□□ 1.24
TRIM46-211ENST00000611379 NAIPQ13075 1403 aa22.82■■□□□ 1.24
TRIM46-211ENST00000611379 HECW1Q76N89 1606 aa22.81■■□□□ 1.24
TRIM46-211ENST00000611379 PELP1Q8IZL8 1130 aaKnown RBP22.8■■□□□ 1.24
TRIM46-211ENST00000611379 UACAQ9BZF9 1416 aa22.8■■□□□ 1.24
TRIM46-211ENST00000611379 TONSLQ96HA7 1378 aa22.79■■□□□ 1.24
TRIM46-211ENST00000611379 DDX10Q13206 875 aaKnown RBP22.79■■□□□ 1.24
TRIM46-211ENST00000611379 PTPN23Q9H3S7 1636 aa22.79■■□□□ 1.24
TRIM46-211ENST00000611379 HIRIP3Q9BW71 556 aaPredicted RBP22.78■■□□□ 1.24
TRIM46-211ENST00000611379 CDK13Q14004 1512 aaKnown RBP22.78■■□□□ 1.24
TRIM46-211ENST00000611379 WDR62O43379 1518 aa22.77■■□□□ 1.24
TRIM46-211ENST00000611379 ARHGEF11O15085 1522 aa22.77■■□□□ 1.23
TRIM46-211ENST00000611379 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
TRIM46-211ENST00000611379 KIAA0586Q9BVV6 1533 aa22.74■■□□□ 1.23
TRIM46-211ENST00000611379 TRIM52Q96A61 297 aa22.73■■□□□ 1.23
TRIM46-211ENST00000611379 FBLN2P98095 1184 aa22.72■■□□□ 1.23
TRIM46-211ENST00000611379 CHMP7Q8WUX9 453 aaPredicted RBP22.71■■□□□ 1.23
TRIM46-211ENST00000611379 TCOF1Q13428 1488 aaKnown RBP22.69■■□□□ 1.22
TRIM46-211ENST00000611379 GRIN2AQ12879 1464 aa22.68■■□□□ 1.22
TRIM46-211ENST00000611379 KCNH8Q96L42 1107 aa22.68■■□□□ 1.22
TRIM46-211ENST00000611379 DISP1Q96F81 1524 aa22.67■■□□□ 1.22
TRIM46-211ENST00000611379 MIA2Q96PC5 1412 aa22.67■■□□□ 1.22
TRIM46-211ENST00000611379 CDK11AQ9UQ88 783 aaPredicted RBP22.65■■□□□ 1.22
TRIM46-211ENST00000611379 EIF4G3O43432 1585 aaKnown RBP22.65■■□□□ 1.22
TRIM46-211ENST00000611379 KIAA0556O60303 1618 aa22.63■■□□□ 1.21
TRIM46-211ENST00000611379 NUP153P49790 1475 aaKnown RBP22.6■■□□□ 1.21
TRIM46-211ENST00000611379 ZNF644Q9H582 1327 aaPredicted RBP22.59■■□□□ 1.21
TRIM46-211ENST00000611379 MPHOSPH9Q99550 1183 aa22.58■■□□□ 1.21
TRIM46-211ENST00000611379 MAGI1Q96QZ7 1491 aaPredicted RBP22.57■■□□□ 1.2
TRIM46-211ENST00000611379 AKNAQ7Z591 1439 aa22.56■■□□□ 1.2
TRIM46-211ENST00000611379 SYNJ2O15056 1496 aa22.54■■□□□ 1.2
TRIM46-211ENST00000611379 FOXD1Q16676 465 aa22.54■■□□□ 1.2
TRIM46-211ENST00000611379 JPH4Q96JJ6 628 aa22.54■■□□□ 1.2
TRIM46-211ENST00000611379 RAPGEF6Q8TEU7 1601 aa22.54■■□□□ 1.2
TRIM46-211ENST00000611379 ANP32CO43423 234 aa22.53■■□□□ 1.2
TRIM46-211ENST00000611379 KDM6BO15054 1643 aa22.52■■□□□ 1.2
TRIM46-211ENST00000611379 DAPK1P53355 1430 aa22.52■■□□□ 1.2
TRIM46-211ENST00000611379 PRG4Q92954 1404 aaPredicted RBP22.52■■□□□ 1.19
TRIM46-211ENST00000611379 GCC2Q8IWJ2 1684 aa22.51■■□□□ 1.19
TRIM46-211ENST00000611379 CFDP1Q9UEE9 299 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms