RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 KDM6BO15054 1643 aa17.14■□□□□ 0.33
CTCFL-220ENST00000608858 ABCA10Q8WWZ4 1543 aa17.13■□□□□ 0.33
CTCFL-220ENST00000608858 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
CTCFL-220ENST00000608858 ABCA5Q8WWZ7 1642 aa17.12■□□□□ 0.33
CTCFL-220ENST00000608858 TTBK1Q5TCY1 1321 aaPredicted RBP17.11■□□□□ 0.33
CTCFL-220ENST00000608858 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
CTCFL-220ENST00000608858 FHAD1B1AJZ9 1412 aa17.06■□□□□ 0.32
CTCFL-220ENST00000608858 PLPPR3Q6T4P5 718 aa17.06■□□□□ 0.32
CTCFL-220ENST00000608858 DIP2BQ9P265 1576 aa17.06■□□□□ 0.32
CTCFL-220ENST00000608858 ADAMTS12P58397 1594 aa17.05■□□□□ 0.32
CTCFL-220ENST00000608858 ADGRL1O94910 1474 aa17.02■□□□□ 0.32
CTCFL-220ENST00000608858 WRNQ14191 1432 aaPredicted RBP eCLIP17.01■□□□□ 0.31
CTCFL-220ENST00000608858 MAPKBP1O60336 1514 aa16.99■□□□□ 0.31
CTCFL-220ENST00000608858 HECW2Q9P2P5 1572 aa16.98■□□□□ 0.31
CTCFL-220ENST00000608858 ADCY10Q96PN6 1610 aa16.98■□□□□ 0.31
CTCFL-220ENST00000608858 FBXO41Q8TF61 875 aa16.96■□□□□ 0.31
CTCFL-220ENST00000608858 COL17A1Q9UMD9 1497 aaPredicted RBP16.88■□□□□ 0.29
CTCFL-220ENST00000608858 ERICH3Q5RHP9 1530 aa16.87■□□□□ 0.29
CTCFL-220ENST00000608858 PTPRGP23470 1445 aa16.84■□□□□ 0.29
CTCFL-220ENST00000608858 RUSC2Q8N2Y8 1516 aa16.81■□□□□ 0.28
CTCFL-220ENST00000608858 ASXL2Q76L83 1435 aa16.81■□□□□ 0.28
CTCFL-220ENST00000608858 SUPT5HO00267 1087 aaKnown RBP16.81■□□□□ 0.28
CTCFL-220ENST00000608858 PPRC1Q5VV67 1664 aaKnown RBP16.79■□□□□ 0.28
CTCFL-220ENST00000608858 MSH5O43196 834 aa16.79■□□□□ 0.28
CTCFL-220ENST00000608858 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
CTCFL-220ENST00000608858 KIAA0586Q9BVV6 1533 aa16.75■□□□□ 0.27
CTCFL-220ENST00000608858 BIVM-ERCC5R4GMW8 1640 aa16.74■□□□□ 0.27
CTCFL-220ENST00000608858 PLB1Q6P1J6 1458 aa16.73■□□□□ 0.27
CTCFL-220ENST00000608858 ABCC2Q92887 1545 aa16.71■□□□□ 0.27
CTCFL-220ENST00000608858 GLI2P10070 1586 aa16.7■□□□□ 0.26
CTCFL-220ENST00000608858 LMTK3Q96Q04 1460 aa16.7■□□□□ 0.26
CTCFL-220ENST00000608858 TNIKQ9UKE5 1360 aa16.69■□□□□ 0.26
CTCFL-220ENST00000608858 CUL7Q14999 1698 aa16.69■□□□□ 0.26
CTCFL-220ENST00000608858 IGF1RP08069 1367 aa16.68■□□□□ 0.26
CTCFL-220ENST00000608858 KCNH8Q96L42 1107 aa16.68■□□□□ 0.26
CTCFL-220ENST00000608858 ILDR2Q71H61 639 aa16.67■□□□□ 0.26
CTCFL-220ENST00000608858 EPRSP07814 1512 aaKnown RBP16.66■□□□□ 0.26
CTCFL-220ENST00000608858 CARMIL2Q6F5E8 1435 aa16.64■□□□□ 0.25
CTCFL-220ENST00000608858 UACAQ9BZF9 1416 aa16.62■□□□□ 0.25
CTCFL-220ENST00000608858 TEX14Q8IWB6 1497 aa16.62■□□□□ 0.25
CTCFL-220ENST00000608858 MAP3K4Q9Y6R4 1608 aa16.6■□□□□ 0.25
CTCFL-220ENST00000608858 SOCS7O14512 581 aa16.58■□□□□ 0.24
CTCFL-220ENST00000608858 UHRF1BP1LA0JNW5 1464 aa16.56■□□□□ 0.24
CTCFL-220ENST00000608858 DISP3Q9P2K9 1392 aa16.56■□□□□ 0.24
CTCFL-220ENST00000608858 CARMIL1Q5VZK9 1371 aa16.55■□□□□ 0.24
CTCFL-220ENST00000608858 ADRA2BP18089 450 aa16.54■□□□□ 0.24
CTCFL-220ENST00000608858 HSPA2P54652 639 aa16.54■□□□□ 0.24
CTCFL-220ENST00000608858 CD109Q6YHK3 1445 aa16.53■□□□□ 0.24
CTCFL-220ENST00000608858 KIF21BO75037 1637 aa16.53■□□□□ 0.24
CTCFL-220ENST00000608858 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
CTCFL-220ENST00000608858 KDM5BQ9UGL1 1544 aa16.52■□□□□ 0.24
CTCFL-220ENST00000608858 ZCCHC11Q5TAX3 1644 aaKnown RBP16.52■□□□□ 0.23
CTCFL-220ENST00000608858 ARID4BQ4LE39 1312 aaPredicted RBP16.51■□□□□ 0.23
CTCFL-220ENST00000608858 PTPRMP28827 1452 aa16.51■□□□□ 0.23
CTCFL-220ENST00000608858 CERKQ8TCT0 537 aa16.51■□□□□ 0.23
CTCFL-220ENST00000608858 KIF27Q86VH2 1401 aa16.51■□□□□ 0.23
CTCFL-220ENST00000608858 ARID3CA6NKF2 412 aa16.49■□□□□ 0.23
CTCFL-220ENST00000608858 PIAS4Q8N2W9 510 aaPredicted RBP16.49■□□□□ 0.23
CTCFL-220ENST00000608858 DISP1Q96F81 1524 aa16.49■□□□□ 0.23
CTCFL-220ENST00000608858 RAPGEF3O95398 923 aa16.47■□□□□ 0.23
CTCFL-220ENST00000608858 WDR7Q9Y4E6 1490 aa16.46■□□□□ 0.23
CTCFL-220ENST00000608858 IQGAP2Q13576 1575 aa16.45■□□□□ 0.22
CTCFL-220ENST00000608858 MAGI3Q5TCQ9 1506 aa16.42■□□□□ 0.22
CTCFL-220ENST00000608858 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
CTCFL-220ENST00000608858 ADAMTSL3P82987 1691 aa16.38■□□□□ 0.21
CTCFL-220ENST00000608858 CFAP43Q8NDM7 1665 aa16.35■□□□□ 0.21
CTCFL-220ENST00000608858 MADDQ8WXG6 1647 aa16.33■□□□□ 0.2
CTCFL-220ENST00000608858 MLECQ14165 292 aa16.32■□□□□ 0.2
CTCFL-220ENST00000608858 P3H3Q8IVL6 736 aa16.32■□□□□ 0.2
CTCFL-220ENST00000608858 ARAP3Q8WWN8 1544 aa16.32■□□□□ 0.2
CTCFL-220ENST00000608858 KIAA0556O60303 1618 aa16.3■□□□□ 0.2
CTCFL-220ENST00000608858 UGGT2Q9NYU1 1516 aa16.3■□□□□ 0.2
CTCFL-220ENST00000608858 BCORL1Q5H9F3 1711 aa16.28■□□□□ 0.2
CTCFL-220ENST00000608858 RIMS1Q86UR5 1692 aaKnown RBP16.27■□□□□ 0.2
CTCFL-220ENST00000608858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.27■□□□□ 0.2
CTCFL-220ENST00000608858 HNRNPUL2Q1KMD3 747 aaKnown RBP16.27■□□□□ 0.2
CTCFL-220ENST00000608858 RAPGEF2Q9Y4G8 1499 aa16.24■□□□□ 0.19
CTCFL-220ENST00000608858 CEBPAP49715 358 aaPredicted RBP16.22■□□□□ 0.19
CTCFL-220ENST00000608858 ABCA8O94911 1581 aa16.21■□□□□ 0.19
CTCFL-220ENST00000608858 PHLDB1Q86UU1 1377 aa16.2■□□□□ 0.18
CTCFL-220ENST00000608858 ATP10BO94823 1461 aa16.19■□□□□ 0.18
CTCFL-220ENST00000608858 FAM9AQ8IZU1 332 aaPredicted RBP16.19■□□□□ 0.18
CTCFL-220ENST00000608858 SPATA31D1Q6ZQQ2 1576 aa16.17■□□□□ 0.18
CTCFL-220ENST00000608858 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
CTCFL-220ENST00000608858 FRMPD1Q5SYB0 1578 aa16.13■□□□□ 0.17
CTCFL-220ENST00000608858 GOLGA3Q08378 1498 aa16.13■□□□□ 0.17
CTCFL-220ENST00000608858 NEO1Q92859 1461 aa16.12■□□□□ 0.17
CTCFL-220ENST00000608858 RANGAP1P46060 587 aaPredicted RBP16.11■□□□□ 0.17
CTCFL-220ENST00000608858 ABCA9Q8IUA7 1624 aa16.11■□□□□ 0.17
CTCFL-220ENST00000608858 POGZQ7Z3K3 1410 aa16.11■□□□□ 0.17
CTCFL-220ENST00000608858 YEATS2Q9ULM3 1422 aa16.1■□□□□ 0.17
CTCFL-220ENST00000608858 DENND4BO75064 1496 aaPredicted RBP16.09■□□□□ 0.17
CTCFL-220ENST00000608858 AKNAQ7Z591 1439 aa16.07■□□□□ 0.16
CTCFL-220ENST00000608858 SIGLEC1Q9BZZ2 1709 aa16.07■□□□□ 0.16
CTCFL-220ENST00000608858 FANCAO15360 1455 aa16.05■□□□□ 0.16
CTCFL-220ENST00000608858 STRCQ7RTU9 1775 aa16.05■□□□□ 0.16
CTCFL-220ENST00000608858 PLEKHD1A6NEE1 506 aa16.04■□□□□ 0.16
CTCFL-220ENST00000608858 CTTNBP2Q8WZ74 1663 aa16.04■□□□□ 0.16
CTCFL-220ENST00000608858 ARHGEF40Q8TER5 1519 aa16.03■□□□□ 0.16
CTCFL-220ENST00000608858 UBAP1LF5GYI3 381 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms