RNA–Protein interactions for RNA: ENST00000607772.5

CNKSR3-205, Transcript of CNKSR family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNKSR3, Length 21,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-205ENST00000607772 HNRNPUQ00839 825 aaKnown RBP eCLIP9.36□□□□□ -0.912e-6■■□□□ 11.8
CNKSR3-205ENST00000607772 FAM9BQ8IZU0 186 aa9.36□□□□□ -0.91
CNKSR3-205ENST00000607772 HIRIP3Q9BW71 556 aaPredicted RBP9.35□□□□□ -0.91
CNKSR3-205ENST00000607772 GOLGA6L22H0YM25 854 aa9.34□□□□□ -0.91
CNKSR3-205ENST00000607772 PKNOX2Q96KN3 472 aa9.34□□□□□ -0.91
CNKSR3-205ENST00000607772 L1TD1Q5T7N2 865 aaKnown RBP9.33□□□□□ -0.92
CNKSR3-205ENST00000607772 SENP3-EIF4A1A0A087X0R7 540 aa9.33□□□□□ -0.92
CNKSR3-205ENST00000607772 PODXL2Q9NZ53 605 aa9.33□□□□□ -0.92
CNKSR3-205ENST00000607772 MIER1Q8N108 512 aa9.33□□□□□ -0.92
CNKSR3-205ENST00000607772 PLPPR3Q6T4P5 718 aa9.32□□□□□ -0.92
CNKSR3-205ENST00000607772 HSP90AA2PQ14568 343 aaPredicted RBP9.32□□□□□ -0.92
CNKSR3-205ENST00000607772 PTMAP06454 111 aaKnown RBP9.32□□□□□ -0.92
CNKSR3-205ENST00000607772 AMER1Q5JTC6 1135 aaPredicted RBP9.31□□□□□ -0.92
CNKSR3-205ENST00000607772 DNTTIP2Q5QJE6 756 aaKnown RBP9.31□□□□□ -0.92
CNKSR3-205ENST00000607772 SENP3Q9H4L4 574 aaPredicted RBP9.31□□□□□ -0.92
CNKSR3-205ENST00000607772 ATRXP46100 2492 aa9.3□□□□□ -0.92
CNKSR3-205ENST00000607772 PNNQ9H307 717 aaKnown RBP9.29□□□□□ -0.92
CNKSR3-205ENST00000607772 CHAF1AQ13111 956 aaPredicted RBP9.29□□□□□ -0.92
CNKSR3-205ENST00000607772 SCRIBQ14160 1630 aa9.29□□□□□ -0.92
CNKSR3-205ENST00000607772 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.29□□□□□ -0.92
CNKSR3-205ENST00000607772 CHGAP10645 457 aaKnown RBP9.28□□□□□ -0.92
CNKSR3-205ENST00000607772 LAS1LQ9Y4W2 734 aaKnown RBP9.28□□□□□ -0.92
CNKSR3-205ENST00000607772 VSIG10Q8N0Z9 540 aa9.28□□□□□ -0.92
CNKSR3-205ENST00000607772 CHIC2Q9UKJ5 165 aa9.27□□□□□ -0.93
CNKSR3-205ENST00000607772 TNNT3P45378 269 aaPredicted RBP9.27□□□□□ -0.93
CNKSR3-205ENST00000607772 SUPT16HQ9Y5B9 1047 aaKnown RBP9.26□□□□□ -0.93
CNKSR3-205ENST00000607772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.25□□□□□ -0.931e-6■□□□□ 10.5
CNKSR3-205ENST00000607772 MSNP26038 577 aaKnown RBP9.24□□□□□ -0.93
CNKSR3-205ENST00000607772 TONSLQ96HA7 1378 aa9.24□□□□□ -0.93
CNKSR3-205ENST00000607772 KDM2AQ9Y2K7 1162 aa9.24□□□□□ -0.93
CNKSR3-205ENST00000607772 MYO18AQ92614 2054 aaKnown RBP9.22□□□□□ -0.93
CNKSR3-205ENST00000607772 MRS2Q9HD23 443 aa9.22□□□□□ -0.93
CNKSR3-205ENST00000607772 TMC1Q8TDI8 760 aa9.22□□□□□ -0.93
CNKSR3-205ENST00000607772 MICAL3Q7RTP6 2002 aa9.22□□□□□ -0.93
CNKSR3-205ENST00000607772 RBM19Q9Y4C8 960 aaKnown RBP9.21□□□□□ -0.94
CNKSR3-205ENST00000607772 A0A0U1RQG5 324 aaPredicted RBP9.2□□□□□ -0.94
CNKSR3-205ENST00000607772 MYO15BQ96JP2 1530 aa9.2□□□□□ -0.94
CNKSR3-205ENST00000607772 MYH10P35580 1976 aa9.2□□□□□ -0.94
CNKSR3-205ENST00000607772 ARID4BQ4LE39 1312 aaPredicted RBP9.19□□□□□ -0.94
CNKSR3-205ENST00000607772 STAG3Q9UJ98 1225 aa9.18□□□□□ -0.94
CNKSR3-205ENST00000607772 PPP4R2Q9NY27 417 aa9.18□□□□□ -0.94
CNKSR3-205ENST00000607772 PLEKHG5O94827 1062 aa9.18□□□□□ -0.94
CNKSR3-205ENST00000607772 CALRP27797 417 aaKnown RBP9.15□□□□□ -0.94
CNKSR3-205ENST00000607772 TPRNQ4KMQ1 711 aa9.15□□□□□ -0.94
CNKSR3-205ENST00000607772 RRP7BPQ9NSQ0 103 aa9.14□□□□□ -0.95
CNKSR3-205ENST00000607772 GOLGA6L6A8MZA4 724 aa9.14□□□□□ -0.95
CNKSR3-205ENST00000607772 USP35Q9P2H5 1018 aa9.13□□□□□ -0.95
CNKSR3-205ENST00000607772 NRDCO43847 1150 aa9.12□□□□□ -0.95
CNKSR3-205ENST00000607772 MAP1BP46821 2468 aaKnown RBP9.12□□□□□ -0.95
CNKSR3-205ENST00000607772 ARID3AQ99856 593 aa9.12□□□□□ -0.95
CNKSR3-205ENST00000607772 TSHZ2Q9NRE2 1034 aa9.11□□□□□ -0.95
CNKSR3-205ENST00000607772 WDR43Q15061 677 aaKnown RBP eCLIP9.11□□□□□ -0.95
CNKSR3-205ENST00000607772 ESF1Q9H501 851 aaKnown RBP9.1□□□□□ -0.95
CNKSR3-205ENST00000607772 APPP05067 770 aa9.1□□□□□ -0.95
CNKSR3-205ENST00000607772 KIAA2012Q0VF49 1180 aa9.1□□□□□ -0.95
CNKSR3-205ENST00000607772 DIDO1Q9BTC0 2240 aaKnown RBP9.09□□□□□ -0.95
CNKSR3-205ENST00000607772 CROCCQ5TZA2 2017 aa9.09□□□□□ -0.95
CNKSR3-205ENST00000607772 ANKRD12Q6UB98 2062 aa9.08□□□□□ -0.96
CNKSR3-205ENST00000607772 A0A0G2JS52 829 aa9.08□□□□□ -0.96
CNKSR3-205ENST00000607772 ZBTB7CA1YPR0 619 aa9.08□□□□□ -0.96
CNKSR3-205ENST00000607772 ZRSR1Q15695 479 aaKnown RBP9.07□□□□□ -0.96
CNKSR3-205ENST00000607772 MYH16Q9H6N6 1097 aa9.07□□□□□ -0.96
CNKSR3-205ENST00000607772 RGL3Q3MIN7 710 aa9.06□□□□□ -0.96
CNKSR3-205ENST00000607772 SETQ01105 290 aaPredicted RBP9.06□□□□□ -0.96
CNKSR3-205ENST00000607772 TIMELESSQ9UNS1 1208 aa9.05□□□□□ -0.96
CNKSR3-205ENST00000607772 GOLGA6L3A6NEY3 463 aa9.03□□□□□ -0.96
CNKSR3-205ENST00000607772 MTERF4Q7Z6M4 381 aaKnown RBP9.03□□□□□ -0.96
CNKSR3-205ENST00000607772 NUMA1Q14980 2115 aa9.03□□□□□ -0.96
CNKSR3-205ENST00000607772 CLIP1P30622 1438 aa9.02□□□□□ -0.96
CNKSR3-205ENST00000607772 GBP4Q96PP9 640 aa9.02□□□□□ -0.97
CNKSR3-205ENST00000607772 UBE2Q2Q8WVN8 375 aa9.02□□□□□ -0.97
CNKSR3-205ENST00000607772 MAP7D2Q96T17 732 aa9.02□□□□□ -0.97
CNKSR3-205ENST00000607772 PDE4DIPQ5VU43 2346 aa9.02□□□□□ -0.97
CNKSR3-205ENST00000607772 B4GALNT3Q6L9W6 998 aa9.01□□□□□ -0.97
CNKSR3-205ENST00000607772 HSCBQ8IWL3 235 aa9.01□□□□□ -0.97
CNKSR3-205ENST00000607772 FANCIQ9NVI1 1328 aa9.01□□□□□ -0.97
CNKSR3-205ENST00000607772 EIF4G2P78344 907 aaKnown RBP eCLIP9.01□□□□□ -0.97
CNKSR3-205ENST00000607772 IPO9Q96P70 1041 aaKnown RBP9.01□□□□□ -0.97
CNKSR3-205ENST00000607772 ANO8Q9HCE9 1232 aaPredicted RBP9.01□□□□□ -0.97
CNKSR3-205ENST00000607772 GOLGA6L1Q8N7Z2 621 aa9□□□□□ -0.97
CNKSR3-205ENST00000607772 CASC1Q6TDU7 716 aa9□□□□□ -0.97
CNKSR3-205ENST00000607772 C14orf37Q86TY3 774 aa9□□□□□ -0.97
CNKSR3-205ENST00000607772 SIN3AQ96ST3 1273 aa9□□□□□ -0.97
CNKSR3-205ENST00000607772 RP1L1Q8IWN7 2480 aaPredicted RBP9□□□□□ -0.97
CNKSR3-205ENST00000607772 HSP90AB1P08238 724 aaKnown RBP8.99□□□□□ -0.97
CNKSR3-205ENST00000607772 MTUS2Q5JR59 1369 aa8.99□□□□□ -0.97
CNKSR3-205ENST00000607772 RGS3P49796 1198 aa8.99□□□□□ -0.97
CNKSR3-205ENST00000607772 ZNF771Q7L3S4 317 aaPredicted RBP8.99□□□□□ -0.97
CNKSR3-205ENST00000607772 KCNH8Q96L42 1107 aa8.98□□□□□ -0.97
CNKSR3-205ENST00000607772 TAOK2Q9UL54 1235 aa8.98□□□□□ -0.97
CNKSR3-205ENST00000607772 RP1P56715 2156 aa8.98□□□□□ -0.97
CNKSR3-205ENST00000607772 PDE4CQ08493 712 aa8.98□□□□□ -0.97
CNKSR3-205ENST00000607772 RRP9O43818 475 aaKnown RBP8.98□□□□□ -0.97
CNKSR3-205ENST00000607772 NINQ8N4C6 2090 aa8.98□□□□□ -0.97
CNKSR3-205ENST00000607772 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.98□□□□□ -0.97
CNKSR3-205ENST00000607772 URB1O60287 2271 aaKnown RBP8.97□□□□□ -0.97
CNKSR3-205ENST00000607772 TULP1O00294 542 aaPredicted RBP8.97□□□□□ -0.97
CNKSR3-205ENST00000607772 TAF3Q5VWG9 929 aa8.96□□□□□ -0.97
CNKSR3-205ENST00000607772 SPRYD3Q8NCJ5 442 aa8.96□□□□□ -0.97
CNKSR3-205ENST00000607772 TSPY4P0CV99 314 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms