RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 FAM50AQ14320 339 aaKnown RBP22.36■■□□□ 1.17
SYDE1-204ENST00000600440 PAK3O75914 559 aaPredicted RBP22.36■■□□□ 1.17
SYDE1-204ENST00000600440 MYT1LQ9UL68 1186 aa22.36■■□□□ 1.17
SYDE1-204ENST00000600440 NOP58Q9Y2X3 529 aaKnown RBP22.33■■□□□ 1.17
SYDE1-204ENST00000600440 SYNJ1O43426 1573 aa22.29■■□□□ 1.16
SYDE1-204ENST00000600440 RTL5Q5HYW3 569 aaPredicted RBP22.28■■□□□ 1.16
SYDE1-204ENST00000600440 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.28■■□□□ 1.16
SYDE1-204ENST00000600440 PPP4R2Q9NY27 417 aa22.26■■□□□ 1.15
SYDE1-204ENST00000600440 ATP1B4Q9UN42 357 aaPredicted RBP22.26■■□□□ 1.15
SYDE1-204ENST00000600440 MAPKBP1O60336 1514 aa22.25■■□□□ 1.15
SYDE1-204ENST00000600440 IL27Q8NEV9 243 aa22.25■■□□□ 1.15
SYDE1-204ENST00000600440 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
SYDE1-204ENST00000600440 RRBP1Q9P2E9 1410 aaKnown RBP22.24■■□□□ 1.15
SYDE1-204ENST00000600440 CNGB1Q14028 1251 aaPredicted RBP22.22■■□□□ 1.15
SYDE1-204ENST00000600440 SMARCA4P51532 1647 aa22.21■■□□□ 1.15
SYDE1-204ENST00000600440 ARAP1Q96P48 1450 aa22.21■■□□□ 1.15
SYDE1-204ENST00000600440 FAM9BQ8IZU0 186 aa22.2■■□□□ 1.14
SYDE1-204ENST00000600440 PABPN1Q86U42 306 aaKnown RBP eCLIP22.2■■□□□ 1.14
SYDE1-204ENST00000600440 SENP3-EIF4A1A0A087X0R7 540 aa22.17■■□□□ 1.14
SYDE1-204ENST00000600440 SETD5Q9C0A6 1442 aa22.15■■□□□ 1.14
SYDE1-204ENST00000600440 ANP32AP39687 249 aaKnown RBP22.12■■□□□ 1.13
SYDE1-204ENST00000600440 CCDC184Q52MB2 194 aa22.11■■□□□ 1.13
SYDE1-204ENST00000600440 NPM2Q86SE8 214 aaKnown RBP22.1■■□□□ 1.13
SYDE1-204ENST00000600440 TONSLQ96HA7 1378 aa22.1■■□□□ 1.13
SYDE1-204ENST00000600440 ZBTB47Q9UFB7 747 aaPredicted RBP22.09■■□□□ 1.13
SYDE1-204ENST00000600440 CUX2O14529 1486 aa22.09■■□□□ 1.13
SYDE1-204ENST00000600440 LAS1LQ9Y4W2 734 aaKnown RBP22.03■■□□□ 1.12
SYDE1-204ENST00000600440 P3H3Q8IVL6 736 aa22.02■■□□□ 1.12
SYDE1-204ENST00000600440 MRS2Q9HD23 443 aa22■■□□□ 1.11
SYDE1-204ENST00000600440 IPO9Q96P70 1041 aaKnown RBP22■■□□□ 1.11
SYDE1-204ENST00000600440 ERICH6BQ5W0A0 696 aa21.98■■□□□ 1.11
SYDE1-204ENST00000600440 EIF5BO60841 1220 aaKnown RBP21.98■■□□□ 1.11
SYDE1-204ENST00000600440 PHLDB1Q86UU1 1377 aa21.94■■□□□ 1.1
SYDE1-204ENST00000600440 TIMELESSQ9UNS1 1208 aa21.93■■□□□ 1.1
SYDE1-204ENST00000600440 NEFMP07197 916 aa21.91■■□□□ 1.1
SYDE1-204ENST00000600440 HSPA5P11021 654 aaKnown RBP21.89■■□□□ 1.09
SYDE1-204ENST00000600440 WASHC2AQ641Q2 1341 aa21.89■■□□□ 1.09
SYDE1-204ENST00000600440 ARHGAP35Q9NRY4 1499 aa21.88■■□□□ 1.09
SYDE1-204ENST00000600440 PRXQ9BXM0 1461 aa21.86■■□□□ 1.09
SYDE1-204ENST00000600440 POLR3GLQ9BT43 218 aa21.86■■□□□ 1.09
SYDE1-204ENST00000600440 AKNAQ7Z591 1439 aa21.83■■□□□ 1.09
SYDE1-204ENST00000600440 BRPF3Q9ULD4 1205 aa21.79■■□□□ 1.08
SYDE1-204ENST00000600440 ERICH3Q5RHP9 1530 aa21.78■■□□□ 1.08
SYDE1-204ENST00000600440 ZBED9Q6R2W3 1325 aa21.78■■□□□ 1.08
SYDE1-204ENST00000600440 PRKRIP1Q9H875 184 aaPredicted RBP21.78■■□□□ 1.08
SYDE1-204ENST00000600440 UNC13AQ9UPW8 1703 aa21.77■■□□□ 1.08
SYDE1-204ENST00000600440 EIF4G2P78344 907 aaKnown RBP eCLIP21.75■■□□□ 1.07
SYDE1-204ENST00000600440 C11orf95C9JLR9 678 aaPredicted RBP21.72■■□□□ 1.07
SYDE1-204ENST00000600440 LRRC9Q6ZRR7 1453 aa21.72■■□□□ 1.07
SYDE1-204ENST00000600440 KIF27Q86VH2 1401 aa21.71■■□□□ 1.07
SYDE1-204ENST00000600440 TIAM1Q13009 1591 aa21.7■■□□□ 1.06
SYDE1-204ENST00000600440 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
SYDE1-204ENST00000600440 UBE2Q2Q8WVN8 375 aa21.66■■□□□ 1.06
SYDE1-204ENST00000600440 CHIC2Q9UKJ5 165 aa21.66■■□□□ 1.06
SYDE1-204ENST00000600440 RRP7BPQ9NSQ0 103 aa21.64■■□□□ 1.05
SYDE1-204ENST00000600440 FHAD1B1AJZ9 1412 aa21.63■■□□□ 1.05
SYDE1-204ENST00000600440 CNTLNQ9NXG0 1405 aa21.63■■□□□ 1.05
SYDE1-204ENST00000600440 CCDC18Q5T9S5 1454 aa21.63■■□□□ 1.05
SYDE1-204ENST00000600440 FOXD1Q16676 465 aa21.63■■□□□ 1.05
SYDE1-204ENST00000600440 NUDCQ9Y266 331 aa21.63■■□□□ 1.05
SYDE1-204ENST00000600440 SLC4A3P48751 1232 aa21.61■■□□□ 1.05
SYDE1-204ENST00000600440 SKAP1Q86WV1 359 aa21.59■■□□□ 1.05
SYDE1-204ENST00000600440 PDE4AP27815 886 aa21.59■■□□□ 1.05
SYDE1-204ENST00000600440 BICRAQ9NZM4 1560 aa21.56■■□□□ 1.04
SYDE1-204ENST00000600440 EXOC6Q8TAG9 804 aa21.56■■□□□ 1.04
SYDE1-204ENST00000600440 CCDC7Q96M83 1385 aa21.54■■□□□ 1.04
SYDE1-204ENST00000600440 PPM1GO15355 546 aaPredicted RBP21.54■■□□□ 1.04
SYDE1-204ENST00000600440 L3MBTL2Q969R5 705 aa21.54■■□□□ 1.04
SYDE1-204ENST00000600440 AQRO60306 1485 aaKnown RBP eCLIP21.53■■□□□ 1.04
SYDE1-204ENST00000600440 GSE1Q14687 1217 aa21.52■■□□□ 1.04
SYDE1-204ENST00000600440 USP35Q9P2H5 1018 aa21.52■■□□□ 1.04
SYDE1-204ENST00000600440 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.04
SYDE1-204ENST00000600440 ZNF326Q5BKZ1 582 aaKnown RBP21.52■■□□□ 1.03
SYDE1-204ENST00000600440 UACAQ9BZF9 1416 aa21.51■■□□□ 1.03
SYDE1-204ENST00000600440 DAXXQ9UER7 740 aaPredicted RBP21.51■■□□□ 1.03
SYDE1-204ENST00000600440 SMG6Q86US8 1419 aaKnown RBP21.5■■□□□ 1.03
SYDE1-204ENST00000600440 FRAT1Q92837 279 aaPredicted RBP21.49■■□□□ 1.03
SYDE1-204ENST00000600440 FHOD3Q2V2M9 1422 aa21.49■■□□□ 1.03
SYDE1-204ENST00000600440 KIF7Q2M1P5 1343 aa21.48■■□□□ 1.03
SYDE1-204ENST00000600440 PTPRKQ15262 1439 aa21.48■■□□□ 1.03
SYDE1-204ENST00000600440 WASHC2CQ9Y4E1 1318 aa21.47■■□□□ 1.03
SYDE1-204ENST00000600440 CUX1P39880 1505 aa21.46■■□□□ 1.03
SYDE1-204ENST00000600440 TMC1Q8TDI8 760 aa21.46■■□□□ 1.03
SYDE1-204ENST00000600440 TCERG1O14776 1098 aaKnown RBP21.45■■□□□ 1.02
SYDE1-204ENST00000600440 NFKBIBQ15653 356 aa21.45■■□□□ 1.02
SYDE1-204ENST00000600440 MTUS2Q5JR59 1369 aa21.44■■□□□ 1.02
SYDE1-204ENST00000600440 BACH2Q9BYV9 841 aa21.44■■□□□ 1.02
SYDE1-204ENST00000600440 BIVM-ERCC5R4GMW8 1640 aa21.44■■□□□ 1.02
SYDE1-204ENST00000600440 CARMIL1Q5VZK9 1371 aa21.43■■□□□ 1.02
SYDE1-204ENST00000600440 FGD6Q6ZV73 1430 aa21.42■■□□□ 1.02
SYDE1-204ENST00000600440 PCF11O94913 1555 aaKnown RBP21.42■■□□□ 1.02
SYDE1-204ENST00000600440 NBPF8Q3BBV2 869 aa21.42■■□□□ 1.02
SYDE1-204ENST00000600440 IGF1RP08069 1367 aa21.41■■□□□ 1.02
SYDE1-204ENST00000600440 NCOA2Q15596 1464 aa21.41■■□□□ 1.02
SYDE1-204ENST00000600440 MAP3K1Q13233 1512 aa21.39■■□□□ 1.02
SYDE1-204ENST00000600440 RRP1P56182 461 aaKnown RBP21.39■■□□□ 1.01
SYDE1-204ENST00000600440 PEG3Q9GZU2 1588 aa21.38■■□□□ 1.01
SYDE1-204ENST00000600440 PLIN1O60240 522 aa21.38■■□□□ 1.01
SYDE1-204ENST00000600440 KDM5BQ9UGL1 1544 aa21.38■■□□□ 1.01
SYDE1-204ENST00000600440 HFM1A2PYH4 1435 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms