RNA–Protein interactions for RNA: ENST00000600032.5

FARP1-228, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-228ENST00000600032 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
FARP1-228ENST00000600032 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
FARP1-228ENST00000600032 FBLN2P98095 1184 aa16.57■□□□□ 0.24
FARP1-228ENST00000600032 EIF4G3O43432 1585 aaKnown RBP16.56■□□□□ 0.24
FARP1-228ENST00000600032 TRIM41Q8WV44 630 aa16.55■□□□□ 0.24
FARP1-228ENST00000600032 CHRDL2Q6WN34 429 aa16.54■□□□□ 0.24
FARP1-228ENST00000600032 TARBP1Q13395 1621 aaKnown RBP16.54■□□□□ 0.24
FARP1-228ENST00000600032 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
FARP1-228ENST00000600032 SUPT5HO00267 1087 aaKnown RBP16.5■□□□□ 0.23
FARP1-228ENST00000600032 SOGA1O94964 1423 aa16.48■□□□□ 0.23
FARP1-228ENST00000600032 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
FARP1-228ENST00000600032 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
FARP1-228ENST00000600032 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.231e-8■■□□□ 13
FARP1-228ENST00000600032 FGD5Q6ZNL6 1462 aa16.45■□□□□ 0.22
FARP1-228ENST00000600032 RAD54L2Q9Y4B4 1467 aa16.44■□□□□ 0.22
FARP1-228ENST00000600032 CUX1P39880 1505 aa16.44■□□□□ 0.22
FARP1-228ENST00000600032 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
FARP1-228ENST00000600032 CHD1O14646 1710 aa16.41■□□□□ 0.22
FARP1-228ENST00000600032 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
FARP1-228ENST00000600032 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
FARP1-228ENST00000600032 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
FARP1-228ENST00000600032 RIMBP3CA6NJZ7 1639 aa16.4■□□□□ 0.22
FARP1-228ENST00000600032 RIMBP3BA6NNM3 1639 aa16.4■□□□□ 0.22
FARP1-228ENST00000600032 RIMBP3Q9UFD9 1639 aa16.4■□□□□ 0.22
FARP1-228ENST00000600032 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
FARP1-228ENST00000600032 ARHGEF11O15085 1522 aa16.37■□□□□ 0.21
FARP1-228ENST00000600032 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
FARP1-228ENST00000600032 SNAPC4Q5SXM2 1469 aa16.35■□□□□ 0.21
FARP1-228ENST00000600032 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
FARP1-228ENST00000600032 EHMT2Q96KQ7 1210 aa16.31■□□□□ 0.2
FARP1-228ENST00000600032 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
FARP1-228ENST00000600032 ABCA10Q8WWZ4 1543 aa16.29■□□□□ 0.2
FARP1-228ENST00000600032 GAPVD1Q14C86 1478 aa16.29■□□□□ 0.2
FARP1-228ENST00000600032 MKRN4PQ13434 485 aaPredicted RBP16.29■□□□□ 0.2
FARP1-228ENST00000600032 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
FARP1-228ENST00000600032 PBRM1Q86U86 1689 aa16.28■□□□□ 0.2
FARP1-228ENST00000600032 SYNJ2O15056 1496 aa16.28■□□□□ 0.2
FARP1-228ENST00000600032 WRNQ14191 1432 aaPredicted RBP eCLIP16.27■□□□□ 0.19
FARP1-228ENST00000600032 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
FARP1-228ENST00000600032 TOP2BQ02880 1626 aa16.24■□□□□ 0.19
FARP1-228ENST00000600032 BIVM-ERCC5R4GMW8 1640 aa16.24■□□□□ 0.19
FARP1-228ENST00000600032 PITPNM1O00562 1244 aa16.22■□□□□ 0.19
FARP1-228ENST00000600032 CYB5RLQ6IPT4 315 aa16.22■□□□□ 0.19
FARP1-228ENST00000600032 CLASP1Q7Z460 1538 aa16.22■□□□□ 0.19
FARP1-228ENST00000600032 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
FARP1-228ENST00000600032 ARAP1Q96P48 1450 aa16.19■□□□□ 0.18
FARP1-228ENST00000600032 PIP4P2Q8N4L2 257 aa16.14■□□□□ 0.17
FARP1-228ENST00000600032 SSUH2Q9Y2M2 353 aa16.14■□□□□ 0.17
FARP1-228ENST00000600032 ADAMTS12P58397 1594 aa16.13■□□□□ 0.17
FARP1-228ENST00000600032 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
FARP1-228ENST00000600032 ERICH3Q5RHP9 1530 aa16.11■□□□□ 0.17
FARP1-228ENST00000600032 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
FARP1-228ENST00000600032 FHAD1B1AJZ9 1412 aa16.1■□□□□ 0.17
FARP1-228ENST00000600032 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.17
FARP1-228ENST00000600032 NUP160Q12769 1436 aa16.05■□□□□ 0.16
FARP1-228ENST00000600032 CEP170Q5SW79 1584 aa16.02■□□□□ 0.16
FARP1-228ENST00000600032 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
FARP1-228ENST00000600032 SHROOM2Q13796 1616 aa15.97■□□□□ 0.15
FARP1-228ENST00000600032 KIF27Q86VH2 1401 aa15.96■□□□□ 0.15
FARP1-228ENST00000600032 CUL7Q14999 1698 aa15.92■□□□□ 0.14
FARP1-228ENST00000600032 ERCC6L2Q5T890 1561 aa15.92■□□□□ 0.14
FARP1-228ENST00000600032 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
FARP1-228ENST00000600032 PRG4Q92954 1404 aaPredicted RBP15.88■□□□□ 0.13
FARP1-228ENST00000600032 JPH4Q96JJ6 628 aa15.88■□□□□ 0.13
FARP1-228ENST00000600032 IGF1RP08069 1367 aa15.87■□□□□ 0.13
FARP1-228ENST00000600032 HAX1O00165 279 aa15.86■□□□□ 0.13
FARP1-228ENST00000600032 SP7Q8TDD2 431 aaPredicted RBP15.84■□□□□ 0.13
FARP1-228ENST00000600032 KIAA0586Q9BVV6 1533 aa15.84■□□□□ 0.13
FARP1-228ENST00000600032 PRKAR2AP13861 404 aaKnown RBP15.83■□□□□ 0.12
FARP1-228ENST00000600032 CARMIL1Q5VZK9 1371 aa15.8■□□□□ 0.12
FARP1-228ENST00000600032 PRR29P0C7W0 189 aa15.79■□□□□ 0.12
FARP1-228ENST00000600032 NPM1P06748 294 aaKnown RBP eCLIP15.76■□□□□ 0.11
FARP1-228ENST00000600032 CARMIL2Q6F5E8 1435 aa15.72■□□□□ 0.11
FARP1-228ENST00000600032 IQGAP2Q13576 1575 aa15.7■□□□□ 0.1
FARP1-228ENST00000600032 RAPGEF2Q9Y4G8 1499 aa15.69■□□□□ 0.1
FARP1-228ENST00000600032 MAPKBP1O60336 1514 aa15.68■□□□□ 0.1
FARP1-228ENST00000600032 SPDYE4A6NLX3 237 aa15.68■□□□□ 0.1
FARP1-228ENST00000600032 ADCY10Q96PN6 1610 aa15.68■□□□□ 0.1
FARP1-228ENST00000600032 KIF13AQ9H1H9 1805 aa15.67■□□□□ 0.1
FARP1-228ENST00000600032 PTPRGP23470 1445 aa15.67■□□□□ 0.1
FARP1-228ENST00000600032 TNIKQ9UKE5 1360 aa15.66■□□□□ 0.1
FARP1-228ENST00000600032 ABCC10Q5T3U5 1492 aa15.65■□□□□ 0.1
FARP1-228ENST00000600032 STAG3Q9UJ98 1225 aa15.64■□□□□ 0.09
FARP1-228ENST00000600032 FAM69CQ0P6D2 419 aa15.62■□□□□ 0.09
FARP1-228ENST00000600032 CHADLQ6NUI6 762 aa15.6■□□□□ 0.09
FARP1-228ENST00000600032 DIP2BQ9P265 1576 aa15.6■□□□□ 0.09
FARP1-228ENST00000600032 TTBK1Q5TCY1 1321 aaPredicted RBP15.6■□□□□ 0.09
FARP1-228ENST00000600032 UGGT2Q9NYU1 1516 aa15.59■□□□□ 0.09
FARP1-228ENST00000600032 ABCC2Q92887 1545 aa15.58■□□□□ 0.08
FARP1-228ENST00000600032 C19orf67A6NJJ6 358 aa15.57■□□□□ 0.08
FARP1-228ENST00000600032 DISP1Q96F81 1524 aa15.57■□□□□ 0.08
FARP1-228ENST00000600032 CTTNBP2Q8WZ74 1663 aa15.57■□□□□ 0.08
FARP1-228ENST00000600032 UHRF1BP1LA0JNW5 1464 aa15.56■□□□□ 0.08
FARP1-228ENST00000600032 UACAQ9BZF9 1416 aa15.55■□□□□ 0.08
FARP1-228ENST00000600032 KIAA0556O60303 1618 aa15.54■□□□□ 0.08
FARP1-228ENST00000600032 GOLGA3Q08378 1498 aa15.53■□□□□ 0.08
FARP1-228ENST00000600032 PLB1Q6P1J6 1458 aa15.53■□□□□ 0.08
FARP1-228ENST00000600032 EVX2Q03828 476 aa15.53■□□□□ 0.08
FARP1-228ENST00000600032 PRXQ9BXM0 1461 aa15.52■□□□□ 0.07
FARP1-228ENST00000600032 ASXL2Q76L83 1435 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms