RNA–Protein interactions for RNA: ENST00000600032.5

FARP1-228, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-228ENST00000600032 AEBP2Q6ZN18 517 aaPredicted RBP29.75■■■□□ 2.35
FARP1-228ENST00000600032 CHIC1Q5VXU3 224 aa28.48■■■□□ 2.15
FARP1-228ENST00000600032 SENP3Q9H4L4 574 aaPredicted RBP25.54■■□□□ 1.68
FARP1-228ENST00000600032 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
FARP1-228ENST00000600032 FOXD1Q16676 465 aa23.67■■□□□ 1.38
FARP1-228ENST00000600032 PLPPR3Q6T4P5 718 aa22.87■■□□□ 1.25
FARP1-228ENST00000600032 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
FARP1-228ENST00000600032 MSH5O43196 834 aa22.25■■□□□ 1.15
FARP1-228ENST00000600032 PIAS4Q8N2W9 510 aaPredicted RBP22.2■■□□□ 1.14
FARP1-228ENST00000600032 PPP6R1Q9UPN7 881 aa22.17■■□□□ 1.14
FARP1-228ENST00000600032 ADRA2BP18089 450 aa22.12■■□□□ 1.13
FARP1-228ENST00000600032 POTEDQ86YR6 584 aa21.39■■□□□ 1.01
FARP1-228ENST00000600032 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
FARP1-228ENST00000600032 CCDC180Q9P1Z9 1646 aa20.42■□□□□ 0.86
FARP1-228ENST00000600032 MAPK8IP2Q13387 824 aaPredicted RBP20.26■□□□□ 0.83
FARP1-228ENST00000600032 DMRT2Q9Y5R5 561 aa20.23■□□□□ 0.83
FARP1-228ENST00000600032 ABCC9O60706 1549 aa20.22■□□□□ 0.83
FARP1-228ENST00000600032 PPP4R3CPQ6ZMV5 832 aa20■□□□□ 0.79
FARP1-228ENST00000600032 CNKSR2Q8WXI2 1034 aa19.66■□□□□ 0.74
FARP1-228ENST00000600032 HOXD11P31277 338 aaPredicted RBP19.54■□□□□ 0.72
FARP1-228ENST00000600032 RNF216Q9NWF9 866 aaPredicted RBP19.45■□□□□ 0.7
FARP1-228ENST00000600032 NCBP3Q53F19 620 aaKnown RBP19.39■□□□□ 0.69
FARP1-228ENST00000600032 DCAF8L1A6NGE4 600 aa19.38■□□□□ 0.69
FARP1-228ENST00000600032 RB1CC1Q8TDY2 1594 aa19.38■□□□□ 0.69
FARP1-228ENST00000600032 NACADO15069 1562 aa19.27■□□□□ 0.67
FARP1-228ENST00000600032 DCAF8L2P0C7V8 631 aa19.13■□□□□ 0.65
FARP1-228ENST00000600032 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
FARP1-228ENST00000600032 CACNB1Q02641 598 aaPredicted RBP18.97■□□□□ 0.63
FARP1-228ENST00000600032 NPM3O75607 178 aaKnown RBP18.96■□□□□ 0.63
FARP1-228ENST00000600032 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
FARP1-228ENST00000600032 RNF39Q9H2S5 420 aa18.92■□□□□ 0.62
FARP1-228ENST00000600032 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
FARP1-228ENST00000600032 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
FARP1-228ENST00000600032 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
FARP1-228ENST00000600032 PABPN1Q86U42 306 aaKnown RBP eCLIP18.81■□□□□ 0.6
FARP1-228ENST00000600032 C1QBPQ07021 282 aaKnown RBP18.73■□□□□ 0.59
FARP1-228ENST00000600032 BICRAQ9NZM4 1560 aa18.71■□□□□ 0.59
FARP1-228ENST00000600032 KCNA4P22459 653 aa18.67■□□□□ 0.58
FARP1-228ENST00000600032 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.64■□□□□ 0.571e-12■□□□□ 8.7
FARP1-228ENST00000600032 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
FARP1-228ENST00000600032 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
FARP1-228ENST00000600032 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
FARP1-228ENST00000600032 CC2D2AQ9P2K1 1620 aa18.29■□□□□ 0.52
FARP1-228ENST00000600032 CECR2Q9BXF3 1484 aa18.24■□□□□ 0.51
FARP1-228ENST00000600032 U3KPZ7 1027 aaPredicted RBP18.18■□□□□ 0.5
FARP1-228ENST00000600032 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
FARP1-228ENST00000600032 APLP2Q06481 763 aa17.91■□□□□ 0.46
FARP1-228ENST00000600032 CAPN15O75808 1086 aa17.9■□□□□ 0.46
FARP1-228ENST00000600032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.45
FARP1-228ENST00000600032 HNRNPUL2Q1KMD3 747 aaKnown RBP17.89■□□□□ 0.45
FARP1-228ENST00000600032 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
FARP1-228ENST00000600032 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
FARP1-228ENST00000600032 SAMD1Q6SPF0 538 aaPredicted RBP17.75■□□□□ 0.43
FARP1-228ENST00000600032 DSG3P32926 999 aa17.74■□□□□ 0.43
FARP1-228ENST00000600032 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
FARP1-228ENST00000600032 SMARCA2P51531 1590 aa17.72■□□□□ 0.43
FARP1-228ENST00000600032 SLC4A1APQ9BWU0 796 aaKnown RBP17.72■□□□□ 0.43
FARP1-228ENST00000600032 ATAD2BQ9ULI0 1458 aa17.7■□□□□ 0.42
FARP1-228ENST00000600032 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
FARP1-228ENST00000600032 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
FARP1-228ENST00000600032 HMGXB3Q12766 1538 aa17.66■□□□□ 0.42
FARP1-228ENST00000600032 MYCNP04198 464 aaPredicted RBP17.62■□□□□ 0.41
FARP1-228ENST00000600032 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
FARP1-228ENST00000600032 BAZ1BQ9UIG0 1483 aaKnown RBP17.57■□□□□ 0.4
FARP1-228ENST00000600032 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
FARP1-228ENST00000600032 ERCC6Q03468 1493 aa17.52■□□□□ 0.4
FARP1-228ENST00000600032 MROH2BQ7Z745 1585 aa17.48■□□□□ 0.39
FARP1-228ENST00000600032 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
FARP1-228ENST00000600032 CUX2O14529 1486 aa17.46■□□□□ 0.39
FARP1-228ENST00000600032 ABCB7O75027 752 aa17.42■□□□□ 0.38
FARP1-228ENST00000600032 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
FARP1-228ENST00000600032 NESP48681 1621 aa17.37■□□□□ 0.37
FARP1-228ENST00000600032 WIZO95785 1651 aa17.29■□□□□ 0.36
FARP1-228ENST00000600032 PDS5BQ9NTI5 1447 aa17.28■□□□□ 0.36
FARP1-228ENST00000600032 DNAJC5Q9H3Z4 198 aa17.25■□□□□ 0.35
FARP1-228ENST00000600032 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
FARP1-228ENST00000600032 CADPSQ9ULU8 1353 aa17.22■□□□□ 0.35
FARP1-228ENST00000600032 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
FARP1-228ENST00000600032 POLA2Q14181 598 aa17.18■□□□□ 0.34
FARP1-228ENST00000600032 RSF1Q96T23 1441 aaPredicted RBP17.18■□□□□ 0.34
FARP1-228ENST00000600032 TOP2AP11388 1531 aaKnown RBP17.13■□□□□ 0.33
FARP1-228ENST00000600032 ZBTB22O15209 634 aa17.1■□□□□ 0.33
FARP1-228ENST00000600032 MRC2Q9UBG0 1479 aa17.09■□□□□ 0.33
FARP1-228ENST00000600032 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
FARP1-228ENST00000600032 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
FARP1-228ENST00000600032 CFTRP13569 1480 aa17.05■□□□□ 0.32
FARP1-228ENST00000600032 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
FARP1-228ENST00000600032 WDR62O43379 1518 aa17.04■□□□□ 0.32
FARP1-228ENST00000600032 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.32
FARP1-228ENST00000600032 ATXN8OSP0DMR3 200 aa17■□□□□ 0.31
FARP1-228ENST00000600032 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
FARP1-228ENST00000600032 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
FARP1-228ENST00000600032 CCDC88BA6NC98 1476 aa16.89■□□□□ 0.29
FARP1-228ENST00000600032 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
FARP1-228ENST00000600032 POTEHQ6S545 545 aa16.82■□□□□ 0.28
FARP1-228ENST00000600032 ABCC8Q09428 1581 aa16.76■□□□□ 0.27
FARP1-228ENST00000600032 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
FARP1-228ENST00000600032 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
FARP1-228ENST00000600032 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
FARP1-228ENST00000600032 OSCARQ8IYS5 282 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms