RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 DNAJC5BQ9UF47 199 aa27.79■■■□□ 2.04
ARHGEF1-218ENST00000599589 KCNH8Q96L42 1107 aa27.78■■■□□ 2.04
ARHGEF1-218ENST00000599589 PDS5BQ9NTI5 1447 aa27.78■■■□□ 2.04
ARHGEF1-218ENST00000599589 RAD54L2Q9Y4B4 1467 aa27.77■■■□□ 2.04
ARHGEF1-218ENST00000599589 KANK4Q5T7N3 995 aaPredicted RBP27.75■■■□□ 2.03
ARHGEF1-218ENST00000599589 BCANQ96GW7 911 aa27.73■■■□□ 2.03
ARHGEF1-218ENST00000599589 URB2Q14146 1524 aaKnown RBP27.72■■■□□ 2.03
ARHGEF1-218ENST00000599589 ARHGAP35Q9NRY4 1499 aa27.71■■■□□ 2.03
ARHGEF1-218ENST00000599589 BCL11AQ9H165 835 aa27.68■■■□□ 2.02
ARHGEF1-218ENST00000599589 RRBP1Q9P2E9 1410 aaKnown RBP27.67■■■□□ 2.02
ARHGEF1-218ENST00000599589 FKBP8Q14318 412 aa27.62■■■□□ 2.01
ARHGEF1-218ENST00000599589 CUL7Q14999 1698 aa27.55■■■□□ 2
ARHGEF1-218ENST00000599589 KIF21AQ7Z4S6 1674 aa27.55■■■□□ 2
ARHGEF1-218ENST00000599589 WDR97A6NE52 1622 aa27.55■■■□□ 2
ARHGEF1-218ENST00000599589 ITGAEP38570 1179 aa27.54■■■□□ 2
ARHGEF1-218ENST00000599589 CCNB3Q8WWL7 1395 aa27.54■■■□□ 2
ARHGEF1-218ENST00000599589 MAPKBP1O60336 1514 aa27.48■■□□□ 1.99
ARHGEF1-218ENST00000599589 TDRD9Q8NDG6 1382 aaKnown RBP27.47■■□□□ 1.99
ARHGEF1-218ENST00000599589 DDX10Q13206 875 aaKnown RBP27.47■■□□□ 1.99
ARHGEF1-218ENST00000599589 ABCA5Q8WWZ7 1642 aa27.46■■□□□ 1.99
ARHGEF1-218ENST00000599589 RBM19Q9Y4C8 960 aaKnown RBP27.46■■□□□ 1.99
ARHGEF1-218ENST00000599589 RAB3GAP2Q9H2M9 1393 aa27.45■■□□□ 1.98
ARHGEF1-218ENST00000599589 GAPVD1Q14C86 1478 aa27.45■■□□□ 1.98
ARHGEF1-218ENST00000599589 NEFLP07196 543 aa27.4■■□□□ 1.98
ARHGEF1-218ENST00000599589 FHAD1B1AJZ9 1412 aa27.39■■□□□ 1.98
ARHGEF1-218ENST00000599589 MAP3K1Q13233 1512 aa27.39■■□□□ 1.97
ARHGEF1-218ENST00000599589 TARBP1Q13395 1621 aaKnown RBP27.36■■□□□ 1.97
ARHGEF1-218ENST00000599589 EFCAB5A4FU69 1503 aa27.35■■□□□ 1.97
ARHGEF1-218ENST00000599589 MRC2Q9UBG0 1479 aa27.35■■□□□ 1.97
ARHGEF1-218ENST00000599589 CTTNBP2Q8WZ74 1663 aa27.34■■□□□ 1.97
ARHGEF1-218ENST00000599589 P3H3Q8IVL6 736 aa27.32■■□□□ 1.96
ARHGEF1-218ENST00000599589 TIAM1Q13009 1591 aa27.32■■□□□ 1.96
ARHGEF1-218ENST00000599589 PPP1R15AO75807 674 aaPredicted RBP27.31■■□□□ 1.96
ARHGEF1-218ENST00000599589 TRIM52Q96A61 297 aa27.31■■□□□ 1.96
ARHGEF1-218ENST00000599589 SIN3AQ96ST3 1273 aa27.3■■□□□ 1.96
ARHGEF1-218ENST00000599589 FHOD3Q2V2M9 1422 aa27.27■■□□□ 1.96
ARHGEF1-218ENST00000599589 SETD5Q9C0A6 1442 aa27.27■■□□□ 1.96
ARHGEF1-218ENST00000599589 HIRIP3Q9BW71 556 aaPredicted RBP27.23■■□□□ 1.95
ARHGEF1-218ENST00000599589 LRRC9Q6ZRR7 1453 aa27.22■■□□□ 1.95
ARHGEF1-218ENST00000599589 PCF11O94913 1555 aaKnown RBP27.22■■□□□ 1.95
ARHGEF1-218ENST00000599589 CCER2I3L3R5 266 aa27.21■■□□□ 1.95
ARHGEF1-218ENST00000599589 AQRO60306 1485 aaKnown RBP eCLIP27.21■■□□□ 1.959e-8■■■■■ 37
ARHGEF1-218ENST00000599589 FYCO1Q9BQS8 1478 aa27.19■■□□□ 1.94
ARHGEF1-218ENST00000599589 CASKIN1Q8WXD9 1431 aa27.19■■□□□ 1.94
ARHGEF1-218ENST00000599589 MSH5O43196 834 aa27.19■■□□□ 1.94
ARHGEF1-218ENST00000599589 ANP32CO43423 234 aa27.19■■□□□ 1.94
ARHGEF1-218ENST00000599589 FMN1Q68DA7 1419 aa27.17■■□□□ 1.94
ARHGEF1-218ENST00000599589 ATP1B4Q9UN42 357 aaPredicted RBP27.16■■□□□ 1.94
ARHGEF1-218ENST00000599589 CFAP43Q8NDM7 1665 aa27.16■■□□□ 1.94
ARHGEF1-218ENST00000599589 WDR62O43379 1518 aa27.14■■□□□ 1.94
ARHGEF1-218ENST00000599589 PBRM1Q86U86 1689 aa27.14■■□□□ 1.94
ARHGEF1-218ENST00000599589 IFT140Q96RY7 1462 aa27.13■■□□□ 1.93
ARHGEF1-218ENST00000599589 SAMD9Q5K651 1589 aa27.12■■□□□ 1.93
ARHGEF1-218ENST00000599589 GRIN2BQ13224 1484 aa27.1■■□□□ 1.93
ARHGEF1-218ENST00000599589 FAM50AQ14320 339 aaKnown RBP27.09■■□□□ 1.93
ARHGEF1-218ENST00000599589 PHLDB1Q86UU1 1377 aa27.08■■□□□ 1.93
ARHGEF1-218ENST00000599589 TIMELESSQ9UNS1 1208 aa27.08■■□□□ 1.93
ARHGEF1-218ENST00000599589 ADAMTS12P58397 1594 aa27.06■■□□□ 1.92
ARHGEF1-218ENST00000599589 SNAPC4Q5SXM2 1469 aa27.04■■□□□ 1.92
ARHGEF1-218ENST00000599589 ERCC6Q03468 1493 aa27.03■■□□□ 1.92
ARHGEF1-218ENST00000599589 ZNF608Q9ULD9 1512 aaPredicted RBP27.01■■□□□ 1.91
ARHGEF1-218ENST00000599589 FANCIQ9NVI1 1328 aa26.99■■□□□ 1.91
ARHGEF1-218ENST00000599589 IRX6P78412 446 aaPredicted RBP26.95■■□□□ 1.91
ARHGEF1-218ENST00000599589 IQGAP2Q13576 1575 aa26.95■■□□□ 1.9
ARHGEF1-218ENST00000599589 CDK11AQ9UQ88 783 aaPredicted RBP26.94■■□□□ 1.9
ARHGEF1-218ENST00000599589 ERICH6Q7L0X2 663 aa26.92■■□□□ 1.9
ARHGEF1-218ENST00000599589 THOC2Q8NI27 1593 aaKnown RBP26.91■■□□□ 1.9
ARHGEF1-218ENST00000599589 HNRNPUQ00839 825 aaKnown RBP eCLIP26.9■■□□□ 1.9
ARHGEF1-218ENST00000599589 MTUS2Q5JR59 1369 aa26.89■■□□□ 1.89
ARHGEF1-218ENST00000599589 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.87■■□□□ 1.894e-7■□□□□ 8.1
ARHGEF1-218ENST00000599589 TONSLQ96HA7 1378 aa26.87■■□□□ 1.89
ARHGEF1-218ENST00000599589 EIF4G3O43432 1585 aaKnown RBP26.86■■□□□ 1.89
ARHGEF1-218ENST00000599589 UGGT2Q9NYU1 1516 aa26.82■■□□□ 1.88
ARHGEF1-218ENST00000599589 LRRIQ1Q96JM4 1722 aa26.82■■□□□ 1.88
ARHGEF1-218ENST00000599589 KIAA0586Q9BVV6 1533 aa26.81■■□□□ 1.88
ARHGEF1-218ENST00000599589 CCDC18Q5T9S5 1454 aa26.79■■□□□ 1.88
ARHGEF1-218ENST00000599589 FGD6Q6ZV73 1430 aa26.78■■□□□ 1.88
ARHGEF1-218ENST00000599589 GRIN2AQ12879 1464 aa26.78■■□□□ 1.88
ARHGEF1-218ENST00000599589 MAGI1Q96QZ7 1491 aaPredicted RBP26.76■■□□□ 1.87
ARHGEF1-218ENST00000599589 EHBP1L1Q8N3D4 1523 aa26.76■■□□□ 1.87
ARHGEF1-218ENST00000599589 HECW1Q76N89 1606 aa26.75■■□□□ 1.87
ARHGEF1-218ENST00000599589 NCOA2Q15596 1464 aa26.74■■□□□ 1.87
ARHGEF1-218ENST00000599589 SUPT6HQ7KZ85 1726 aaKnown RBP26.71■■□□□ 1.87
ARHGEF1-218ENST00000599589 CHMP7Q8WUX9 453 aaPredicted RBP26.69■■□□□ 1.86
ARHGEF1-218ENST00000599589 PPP4R2Q9NY27 417 aa26.69■■□□□ 1.86
ARHGEF1-218ENST00000599589 MYOM3Q5VTT5 1437 aa26.69■■□□□ 1.86
ARHGEF1-218ENST00000599589 SYNJ2O15056 1496 aa26.69■■□□□ 1.86
ARHGEF1-218ENST00000599589 ERICH6BQ5W0A0 696 aa26.68■■□□□ 1.86
ARHGEF1-218ENST00000599589 EPRSP07814 1512 aaKnown RBP26.68■■□□□ 1.86
ARHGEF1-218ENST00000599589 DISP1Q96F81 1524 aa26.67■■□□□ 1.86
ARHGEF1-218ENST00000599589 KIAA0556O60303 1618 aa26.65■■□□□ 1.86
ARHGEF1-218ENST00000599589 MAGI3Q5TCQ9 1506 aa26.65■■□□□ 1.86
ARHGEF1-218ENST00000599589 UACAQ9BZF9 1416 aa26.64■■□□□ 1.86
ARHGEF1-218ENST00000599589 ARHGEF11O15085 1522 aa26.64■■□□□ 1.86
ARHGEF1-218ENST00000599589 MYT1LQ9UL68 1186 aa26.62■■□□□ 1.85
ARHGEF1-218ENST00000599589 KDM5BQ9UGL1 1544 aa26.61■■□□□ 1.85
ARHGEF1-218ENST00000599589 WASHC2AQ641Q2 1341 aa26.6■■□□□ 1.85
ARHGEF1-218ENST00000599589 DEKP35659 375 aaKnown RBP26.59■■□□□ 1.85
ARHGEF1-218ENST00000599589 PTPN23Q9H3S7 1636 aa26.59■■□□□ 1.85
ARHGEF1-218ENST00000599589 FBLN2P98095 1184 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms