RNA–Protein interactions for RNA: ENST00000593380.1

C19orf44-202, Transcript of chromosome 19 open reading frame 44, humanhuman

TSL 1 (best)

Gene C19orf44, Length 3,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf44-202ENST00000593380 CDK11AQ9UQ88 783 aaPredicted RBP18.68■□□□□ 0.58
C19orf44-202ENST00000593380 NBR1Q14596 966 aa18.61■□□□□ 0.57
C19orf44-202ENST00000593380 HNRNPUQ00839 825 aaKnown RBP eCLIP18.61■□□□□ 0.57
C19orf44-202ENST00000593380 FAM50AQ14320 339 aaKnown RBP18.6■□□□□ 0.57
C19orf44-202ENST00000593380 DEKP35659 375 aaKnown RBP18.58■□□□□ 0.57
C19orf44-202ENST00000593380 ARAP1Q96P48 1450 aa18.58■□□□□ 0.56
C19orf44-202ENST00000593380 RAB3GAP2Q9H2M9 1393 aa18.56■□□□□ 0.56
C19orf44-202ENST00000593380 PEG3Q9GZU2 1588 aa18.54■□□□□ 0.56
C19orf44-202ENST00000593380 CCNB3Q8WWL7 1395 aa18.54■□□□□ 0.56
C19orf44-202ENST00000593380 PPP1R15AO75807 674 aaPredicted RBP18.51■□□□□ 0.55
C19orf44-202ENST00000593380 CCDC136Q96JN2 1154 aa18.51■□□□□ 0.55
C19orf44-202ENST00000593380 AEBP2Q6ZN18 517 aaPredicted RBP18.5■□□□□ 0.55
C19orf44-202ENST00000593380 FANCIQ9NVI1 1328 aa18.49■□□□□ 0.55
C19orf44-202ENST00000593380 CUX1P39880 1505 aa18.49■□□□□ 0.55
C19orf44-202ENST00000593380 WDR97A6NE52 1622 aa18.48■□□□□ 0.55
C19orf44-202ENST00000593380 TOP2BQ02880 1626 aa18.48■□□□□ 0.55
C19orf44-202ENST00000593380 KIF27Q86VH2 1401 aa18.47■□□□□ 0.55
C19orf44-202ENST00000593380 B4GALNT3Q6L9W6 998 aa18.45■□□□□ 0.54
C19orf44-202ENST00000593380 PRXQ9BXM0 1461 aa18.45■□□□□ 0.54
C19orf44-202ENST00000593380 CCER2I3L3R5 266 aa18.44■□□□□ 0.54
C19orf44-202ENST00000593380 CUX2O14529 1486 aa18.43■□□□□ 0.54
C19orf44-202ENST00000593380 RRBP1Q9P2E9 1410 aaKnown RBP18.41■□□□□ 0.54
C19orf44-202ENST00000593380 CNGB1Q14028 1251 aaPredicted RBP18.41■□□□□ 0.54
C19orf44-202ENST00000593380 UBE2Q2Q8WVN8 375 aa18.41■□□□□ 0.54
C19orf44-202ENST00000593380 ARHGAP35Q9NRY4 1499 aa18.39■□□□□ 0.53
C19orf44-202ENST00000593380 MAPKBP1O60336 1514 aa18.39■□□□□ 0.53
C19orf44-202ENST00000593380 ARID3CA6NKF2 412 aa18.38■□□□□ 0.53
C19orf44-202ENST00000593380 RTN4Q9NQC3 1192 aaKnown RBP18.37■□□□□ 0.53
C19orf44-202ENST00000593380 PKNOX2Q96KN3 472 aa18.36■□□□□ 0.53
C19orf44-202ENST00000593380 IGF1RP08069 1367 aa18.34■□□□□ 0.53
C19orf44-202ENST00000593380 FAM9BQ8IZU0 186 aa18.34■□□□□ 0.53
C19orf44-202ENST00000593380 PAK3O75914 559 aaPredicted RBP18.34■□□□□ 0.53
C19orf44-202ENST00000593380 SETD5Q9C0A6 1442 aa18.33■□□□□ 0.53
C19orf44-202ENST00000593380 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.52
C19orf44-202ENST00000593380 NOP58Q9Y2X3 529 aaKnown RBP18.33■□□□□ 0.52
C19orf44-202ENST00000593380 CARMIL1Q5VZK9 1371 aa18.32■□□□□ 0.52
C19orf44-202ENST00000593380 PPP4R2Q9NY27 417 aa18.31■□□□□ 0.52
C19orf44-202ENST00000593380 TONSLQ96HA7 1378 aa18.3■□□□□ 0.52
C19orf44-202ENST00000593380 NCAPD3P42695 1498 aa18.3■□□□□ 0.52
C19orf44-202ENST00000593380 RTL5Q5HYW3 569 aaPredicted RBP18.3■□□□□ 0.52
C19orf44-202ENST00000593380 MYT1LQ9UL68 1186 aa18.3■□□□□ 0.52
C19orf44-202ENST00000593380 PHLDB1Q86UU1 1377 aa18.29■□□□□ 0.52
C19orf44-202ENST00000593380 KLHL34Q8N239 644 aa18.28■□□□□ 0.52
C19orf44-202ENST00000593380 SALL2Q9Y467 1007 aaPredicted RBP18.27■□□□□ 0.51
C19orf44-202ENST00000593380 BIVM-ERCC5R4GMW8 1640 aa18.26■□□□□ 0.51
C19orf44-202ENST00000593380 CFTRP13569 1480 aa18.26■□□□□ 0.51
C19orf44-202ENST00000593380 ERICH3Q5RHP9 1530 aa18.25■□□□□ 0.51
C19orf44-202ENST00000593380 FHOD3Q2V2M9 1422 aa18.25■□□□□ 0.51
C19orf44-202ENST00000593380 CCDC184Q52MB2 194 aa18.24■□□□□ 0.51
C19orf44-202ENST00000593380 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
C19orf44-202ENST00000593380 RAD54L2Q9Y4B4 1467 aa18.23■□□□□ 0.51
C19orf44-202ENST00000593380 FGD5Q6ZNL6 1462 aa18.22■□□□□ 0.51
C19orf44-202ENST00000593380 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.21■□□□□ 0.51
C19orf44-202ENST00000593380 CHIC2Q9UKJ5 165 aa18.21■□□□□ 0.51
C19orf44-202ENST00000593380 IL27Q8NEV9 243 aa18.2■□□□□ 0.5
C19orf44-202ENST00000593380 NPM2Q86SE8 214 aaKnown RBP18.2■□□□□ 0.5
C19orf44-202ENST00000593380 CADPSQ9ULU8 1353 aa18.19■□□□□ 0.5
C19orf44-202ENST00000593380 ANP32AP39687 249 aaKnown RBP18.19■□□□□ 0.5
C19orf44-202ENST00000593380 MRS2Q9HD23 443 aa18.18■□□□□ 0.5
C19orf44-202ENST00000593380 NESP48681 1621 aa18.15■□□□□ 0.5
C19orf44-202ENST00000593380 ZBTB47Q9UFB7 747 aaPredicted RBP18.15■□□□□ 0.5
C19orf44-202ENST00000593380 PLPPR3Q6T4P5 718 aa18.15■□□□□ 0.5
C19orf44-202ENST00000593380 HMGXB3Q12766 1538 aa18.13■□□□□ 0.49
C19orf44-202ENST00000593380 TDRD9Q8NDG6 1382 aaKnown RBP18.12■□□□□ 0.49
C19orf44-202ENST00000593380 TIMELESSQ9UNS1 1208 aa18.12■□□□□ 0.49
C19orf44-202ENST00000593380 POLR3GLQ9BT43 218 aa18.12■□□□□ 0.49
C19orf44-202ENST00000593380 RRP7BPQ9NSQ0 103 aa18.12■□□□□ 0.49
C19orf44-202ENST00000593380 HSPA5P11021 654 aaKnown RBP18.1■□□□□ 0.49
C19orf44-202ENST00000593380 LAS1LQ9Y4W2 734 aaKnown RBP18.1■□□□□ 0.49
C19orf44-202ENST00000593380 LRRC9Q6ZRR7 1453 aa18.1■□□□□ 0.49
C19orf44-202ENST00000593380 WASHC2AQ641Q2 1341 aa18.09■□□□□ 0.49
C19orf44-202ENST00000593380 FOXD1Q16676 465 aa18.08■□□□□ 0.48
C19orf44-202ENST00000593380 TIAM1Q13009 1591 aa18.06■□□□□ 0.48
C19orf44-202ENST00000593380 ERICH6BQ5W0A0 696 aa18.06■□□□□ 0.48
C19orf44-202ENST00000593380 IPO9Q96P70 1041 aaKnown RBP18.06■□□□□ 0.48
C19orf44-202ENST00000593380 FANCD2Q9BXW9 1451 aa18.05■□□□□ 0.48
C19orf44-202ENST00000593380 MTUS2Q5JR59 1369 aa18.03■□□□□ 0.48
C19orf44-202ENST00000593380 PCF11O94913 1555 aaKnown RBP18.01■□□□□ 0.47
C19orf44-202ENST00000593380 AKNAQ7Z591 1439 aa18■□□□□ 0.47
C19orf44-202ENST00000593380 NEFMP07197 916 aa18■□□□□ 0.47
C19orf44-202ENST00000593380 EIF4G2P78344 907 aaKnown RBP eCLIP18■□□□□ 0.47
C19orf44-202ENST00000593380 A0A0U1RQG5 324 aaPredicted RBP17.99■□□□□ 0.47
C19orf44-202ENST00000593380 PRKRIP1Q9H875 184 aaPredicted RBP17.98■□□□□ 0.47
C19orf44-202ENST00000593380 NCBP3Q53F19 620 aaKnown RBP17.97■□□□□ 0.47
C19orf44-202ENST00000593380 FHAD1B1AJZ9 1412 aa17.96■□□□□ 0.47
C19orf44-202ENST00000593380 ZBED9Q6R2W3 1325 aa17.96■□□□□ 0.47
C19orf44-202ENST00000593380 C11orf95C9JLR9 678 aaPredicted RBP17.95■□□□□ 0.46
C19orf44-202ENST00000593380 PDE4CQ08493 712 aa17.94■□□□□ 0.46
C19orf44-202ENST00000593380 PTPRKQ15262 1439 aa17.94■□□□□ 0.46
C19orf44-202ENST00000593380 CC2D2AQ9P2K1 1620 aa17.94■□□□□ 0.46
C19orf44-202ENST00000593380 POLA1P09884 1462 aaPredicted RBP17.94■□□□□ 0.46
C19orf44-202ENST00000593380 CCDC18Q5T9S5 1454 aa17.93■□□□□ 0.46
C19orf44-202ENST00000593380 PDIA4P13667 645 aaKnown RBP17.91■□□□□ 0.46
C19orf44-202ENST00000593380 AQRO60306 1485 aaKnown RBP eCLIP17.88■□□□□ 0.45
C19orf44-202ENST00000593380 TOPBP1Q92547 1522 aa17.88■□□□□ 0.45
C19orf44-202ENST00000593380 CNTLNQ9NXG0 1405 aa17.87■□□□□ 0.45
C19orf44-202ENST00000593380 ZNF326Q5BKZ1 582 aaKnown RBP17.86■□□□□ 0.45
C19orf44-202ENST00000593380 FGD6Q6ZV73 1430 aa17.86■□□□□ 0.45
C19orf44-202ENST00000593380 BRPF3Q9ULD4 1205 aa17.85■□□□□ 0.45
C19orf44-202ENST00000593380 L3MBTL2Q969R5 705 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms