RNA–Protein interactions for RNA: ENST00000592831.1

ATP6V0A1-225, Transcript of ATPase H+ transporting V0 subunit a1, human

Gene ATP6V0A1, Length 4,652 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-225	ENST00000592831	FANCD2	Q9BXW9	1451 aa		13.98	□□□□□ -0.17
ATP6V0A1-225	ENST00000592831	ANP32C	O43423	234 aa		13.94	□□□□□ -0.18
ATP6V0A1-225	ENST00000592831	RRP7BP	Q9NSQ0	103 aa		13.93	□□□□□ -0.18
ATP6V0A1-225	ENST00000592831	ERICH6	Q7L0X2	663 aa		13.9	□□□□□ -0.18
ATP6V0A1-225	ENST00000592831	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.9	□□□□□ -0.18
ATP6V0A1-225	ENST00000592831	TRH	P20396	242 aa	Predicted RBP	13.88	□□□□□ -0.19
ATP6V0A1-225	ENST00000592831	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.88	□□□□□ -0.19
ATP6V0A1-225	ENST00000592831	CCNB3	Q8WWL7	1395 aa		13.88	□□□□□ -0.19
ATP6V0A1-225	ENST00000592831	NEFM	P07197	916 aa		13.86	□□□□□ -0.19
ATP6V0A1-225	ENST00000592831	JPH4	Q96JJ6	628 aa		13.85	□□□□□ -0.19
ATP6V0A1-225	ENST00000592831	RAPGEF2	Q9Y4G8	1499 aa		13.84	□□□□□ -0.19
ATP6V0A1-225	ENST00000592831	FMN1	Q68DA7	1419 aa		13.83	□□□□□ -0.2
ATP6V0A1-225	ENST00000592831	KDM2A	Q9Y2K7	1162 aa		13.81	□□□□□ -0.2
ATP6V0A1-225	ENST00000592831	PPP1R15A	O75807	674 aa	Predicted RBP	13.79	□□□□□ -0.2
ATP6V0A1-225	ENST00000592831	OSCAR	Q8IYS5	282 aa		13.79	□□□□□ -0.2
ATP6V0A1-225	ENST00000592831	VPS8	Q8N3P4	1428 aa		13.78	□□□□□ -0.2
ATP6V0A1-225	ENST00000592831	EFCAB2	Q5VUJ9	269 aa		13.76	□□□□□ -0.21
ATP6V0A1-225	ENST00000592831	CC2D2A	Q9P2K1	1620 aa		13.75	□□□□□ -0.21
ATP6V0A1-225	ENST00000592831	FGD5	Q6ZNL6	1462 aa		13.74	□□□□□ -0.21
ATP6V0A1-225	ENST00000592831	GAPVD1	Q14C86	1478 aa		13.73	□□□□□ -0.21
ATP6V0A1-225	ENST00000592831	CFTR	P13569	1480 aa		13.72	□□□□□ -0.21
ATP6V0A1-225	ENST00000592831	HMGXB3	Q12766	1538 aa		13.72	□□□□□ -0.21
ATP6V0A1-225	ENST00000592831	RGL3	Q3MIN7	710 aa		13.72	□□□□□ -0.21
ATP6V0A1-225	ENST00000592831	SLC24A1	O60721	1099 aa		13.7	□□□□□ -0.22
ATP6V0A1-225	ENST00000592831	IGF1R	P08069	1367 aa		13.68	□□□□□ -0.22
ATP6V0A1-225	ENST00000592831	KANK1	Q14678	1352 aa		13.68	□□□□□ -0.22
ATP6V0A1-225	ENST00000592831	PTPRG	P23470	1445 aa		13.68	□□□□□ -0.22
ATP6V0A1-225	ENST00000592831	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
ATP6V0A1-225	ENST00000592831	ARHGAP35	Q9NRY4	1499 aa		13.67	□□□□□ -0.22
ATP6V0A1-225	ENST00000592831	RAD54L2	Q9Y4B4	1467 aa		13.67	□□□□□ -0.22
ATP6V0A1-225	ENST00000592831	BICRA	Q9NZM4	1560 aa		13.66	□□□□□ -0.22
ATP6V0A1-225	ENST00000592831	FHOD3	Q2V2M9	1422 aa		13.66	□□□□□ -0.22
ATP6V0A1-225	ENST00000592831	CYB5RL	Q6IPT4	315 aa		13.66	□□□□□ -0.22
ATP6V0A1-225	ENST00000592831	C14orf37	Q86TY3	774 aa		13.65	□□□□□ -0.22
ATP6V0A1-225	ENST00000592831	DAXX	Q9UER7	740 aa	Predicted RBP	13.65	□□□□□ -0.22
ATP6V0A1-225	ENST00000592831	DDX10	Q13206	875 aa	Known RBP	13.64	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	RSPH4A	Q5TD94	716 aa		13.64	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	KANK4	Q5T7N3	995 aa	Predicted RBP	13.64	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	MLEC	Q14165	292 aa		13.64	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	NES	P48681	1621 aa		13.63	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	CLSPN	Q9HAW4	1339 aa		13.63	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	HDGF	P51858	240 aa	Known RBP	13.62	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	GGT6	Q6P531	493 aa		13.62	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	MRC2	Q9UBG0	1479 aa		13.62	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	AQR	O60306	1485 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	DNAJC5B	Q9UF47	199 aa		13.61	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	RUSC2	Q8N2Y8	1516 aa		13.61	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	CDCA8	Q53HL2	280 aa		13.6	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.6	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	CCDC18	Q5T9S5	1454 aa		13.6	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	SENP3	Q9H4L4	574 aa	Predicted RBP	13.6	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	GRIN2B	Q13224	1484 aa		13.59	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	CANX	P27824	592 aa	Known RBP	13.58	□□□□□ -0.23
ATP6V0A1-225	ENST00000592831	TMC1	Q8TDI8	760 aa		13.57	□□□□□ -0.24
ATP6V0A1-225	ENST00000592831	ANKRD30A	Q9BXX3	1397 aa		13.57	□□□□□ -0.24
ATP6V0A1-225	ENST00000592831	IFT140	Q96RY7	1462 aa		13.56	□□□□□ -0.24
ATP6V0A1-225	ENST00000592831	SPAG9	O60271	1321 aa	Known RBP	13.55	□□□□□ -0.24
ATP6V0A1-225	ENST00000592831	CARD11	Q9BXL7	1154 aa		13.55	□□□□□ -0.24
ATP6V0A1-225	ENST00000592831	SCAF1	Q9H7N4	1312 aa	Known RBP	13.54	□□□□□ -0.24
ATP6V0A1-225	ENST00000592831	POGK	Q9P215	609 aa		13.53	□□□□□ -0.24
ATP6V0A1-225	ENST00000592831	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.52	□□□□□ -0.24
ATP6V0A1-225	ENST00000592831	SETD5	Q9C0A6	1442 aa		13.52	□□□□□ -0.24
ATP6V0A1-225	ENST00000592831	TIMELESS	Q9UNS1	1208 aa		13.52	□□□□□ -0.24
ATP6V0A1-225	ENST00000592831	TOPBP1	Q92547	1522 aa		13.52	□□□□□ -0.25
ATP6V0A1-225	ENST00000592831	KIF3B	O15066	747 aa		13.52	□□□□□ -0.25
ATP6V0A1-225	ENST00000592831	WDR43	Q15061	677 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
ATP6V0A1-225	ENST00000592831	PKD2	Q13563	968 aa		13.51	□□□□□ -0.25
ATP6V0A1-225	ENST00000592831	SIN3A	Q96ST3	1273 aa		13.51	□□□□□ -0.25
ATP6V0A1-225	ENST00000592831	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.5	□□□□□ -0.25
ATP6V0A1-225	ENST00000592831	NUP155	O75694	1391 aa		13.49	□□□□□ -0.25
ATP6V0A1-225	ENST00000592831	FAM9B	Q8IZU0	186 aa		13.49	□□□□□ -0.25
ATP6V0A1-225	ENST00000592831	DCAF11	Q8TEB1	546 aa		13.49	□□□□□ -0.25
ATP6V0A1-225	ENST00000592831	LAMC3	Q9Y6N6	1575 aa		13.47	□□□□□ -0.25
ATP6V0A1-225	ENST00000592831	POLA1	P09884	1462 aa	Predicted RBP	13.47	□□□□□ -0.25
ATP6V0A1-225	ENST00000592831	MRS2	Q9HD23	443 aa		13.47	□□□□□ -0.25
ATP6V0A1-225	ENST00000592831	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
ATP6V0A1-225	ENST00000592831	HAP1	P54257	671 aa	Predicted RBP	13.45	□□□□□ -0.26
ATP6V0A1-225	ENST00000592831	KNSTRN	Q9Y448	316 aa		13.45	□□□□□ -0.26
ATP6V0A1-225	ENST00000592831	WASHC2C	Q9Y4E1	1318 aa		13.44	□□□□□ -0.26
ATP6V0A1-225	ENST00000592831	MPHOSPH9	Q99550	1183 aa		13.43	□□□□□ -0.26
ATP6V0A1-225	ENST00000592831	FAM69C	Q0P6D2	419 aa		13.43	□□□□□ -0.26
ATP6V0A1-225	ENST00000592831	DNMBP	Q6XZF7	1577 aa		13.42	□□□□□ -0.26
ATP6V0A1-225	ENST00000592831	CFAP53	Q96M91	514 aa		13.42	□□□□□ -0.26
ATP6V0A1-225	ENST00000592831	PLEKHG5	O94827	1062 aa		13.41	□□□□□ -0.26
ATP6V0A1-225	ENST00000592831	ZBTB7C	A1YPR0	619 aa		13.4	□□□□□ -0.26
ATP6V0A1-225	ENST00000592831	CUX1	P39880	1505 aa		13.4	□□□□□ -0.26
ATP6V0A1-225	ENST00000592831	SYNJ1	O43426	1573 aa		13.4	□□□□□ -0.26
ATP6V0A1-225	ENST00000592831	SALL2	Q9Y467	1007 aa	Predicted RBP	13.4	□□□□□ -0.26
ATP6V0A1-225	ENST00000592831	PRG4	Q92954	1404 aa	Predicted RBP	13.39	□□□□□ -0.27
ATP6V0A1-225	ENST00000592831	RAB3GAP2	Q9H2M9	1393 aa		13.39	□□□□□ -0.27
ATP6V0A1-225	ENST00000592831	TOP2B	Q02880	1626 aa		13.39	□□□□□ -0.27
ATP6V0A1-225	ENST00000592831	TMF1	P82094	1093 aa		13.39	□□□□□ -0.27
ATP6V0A1-225	ENST00000592831	PEG3	Q9GZU2	1588 aa		13.38	□□□□□ -0.27
ATP6V0A1-225	ENST00000592831	LMOD2	Q6P5Q4	547 aa		13.37	□□□□□ -0.27
ATP6V0A1-225	ENST00000592831	FOXD1	Q16676	465 aa		13.36	□□□□□ -0.27
ATP6V0A1-225	ENST00000592831	NPM2	Q86SE8	214 aa	Known RBP	13.36	□□□□□ -0.27
ATP6V0A1-225	ENST00000592831	EID1	Q9Y6B2	187 aa		13.36	□□□□□ -0.27
ATP6V0A1-225	ENST00000592831	ERICH3	Q5RHP9	1530 aa		13.36	□□□□□ -0.27
ATP6V0A1-225	ENST00000592831	SNAPC4	Q5SXM2	1469 aa		13.36	□□□□□ -0.27
ATP6V0A1-225	ENST00000592831	BCL11A	Q9H165	835 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms