RNA–Protein interactions for RNA: ENST00000592831.1

ATP6V0A1-225, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

Gene ATP6V0A1, Length 4,652 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-225ENST00000592831 NISCHQ9Y2I1 1504 aa18.65■□□□□ 0.58
ATP6V0A1-225ENST00000592831 DCAF8L2P0C7V8 631 aa18.28■□□□□ 0.52
ATP6V0A1-225ENST00000592831 SUPT5HO00267 1087 aaKnown RBP16.99■□□□□ 0.31
ATP6V0A1-225ENST00000592831 SHROOM4Q9ULL8 1493 aa16.97■□□□□ 0.31
ATP6V0A1-225ENST00000592831 ABCC9O60706 1549 aa16.14■□□□□ 0.17
ATP6V0A1-225ENST00000592831 EHMT2Q96KQ7 1210 aa16.06■□□□□ 0.16
ATP6V0A1-225ENST00000592831 FAM9AQ8IZU1 332 aaPredicted RBP15.99■□□□□ 0.15
ATP6V0A1-225ENST00000592831 APLP2Q06481 763 aa15.93■□□□□ 0.14
ATP6V0A1-225ENST00000592831 TRIM41Q8WV44 630 aa15.89■□□□□ 0.13
ATP6V0A1-225ENST00000592831 PABPN1Q86U42 306 aaKnown RBP eCLIP15.79■□□□□ 0.125e-7■□□□□ 10.9
ATP6V0A1-225ENST00000592831 UBTFP17480 764 aaKnown RBP15.61■□□□□ 0.09
ATP6V0A1-225ENST00000592831 RANGAP1P46060 587 aaPredicted RBP15.61■□□□□ 0.09
ATP6V0A1-225ENST00000592831 CCDC180Q9P1Z9 1646 aa15.59■□□□□ 0.09
ATP6V0A1-225ENST00000592831 ATP1B4Q9UN42 357 aaPredicted RBP15.52■□□□□ 0.07
ATP6V0A1-225ENST00000592831 TTBK1Q5TCY1 1321 aaPredicted RBP15.43■□□□□ 0.06
ATP6V0A1-225ENST00000592831 ZCCHC6Q5VYS8 1495 aaKnown RBP15.42■□□□□ 0.06
ATP6V0A1-225ENST00000592831 SCRIBQ14160 1630 aa15.3■□□□□ 0.04
ATP6V0A1-225ENST00000592831 CHIC1Q5VXU3 224 aa15.29■□□□□ 0.04
ATP6V0A1-225ENST00000592831 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
ATP6V0A1-225ENST00000592831 PCGF6Q9BYE7 350 aa15.21■□□□□ 0.03
ATP6V0A1-225ENST00000592831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
ATP6V0A1-225ENST00000592831 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
ATP6V0A1-225ENST00000592831 NACADO15069 1562 aa15.15■□□□□ 0.02
ATP6V0A1-225ENST00000592831 LOC105371045A0A1W2PR82 267 aa15.04■□□□□ -0
ATP6V0A1-225ENST00000592831 CCER1Q8TC90 406 aaPredicted RBP15.04■□□□□ -0
ATP6V0A1-225ENST00000592831 MYT1LQ9UL68 1186 aa15□□□□□ -0.01
ATP6V0A1-225ENST00000592831 PPARGC1BQ86YN6 1023 aaKnown RBP14.98□□□□□ -0.01
ATP6V0A1-225ENST00000592831 FBLN2P98095 1184 aa14.98□□□□□ -0.01
ATP6V0A1-225ENST00000592831 ZEB1P37275 1124 aaPredicted RBP14.98□□□□□ -0.01
ATP6V0A1-225ENST00000592831 DCAF1Q9Y4B6 1507 aa14.93□□□□□ -0.02
ATP6V0A1-225ENST00000592831 ITGAEP38570 1179 aa14.87□□□□□ -0.03
ATP6V0A1-225ENST00000592831 TRIM26Q12899 539 aaPredicted RBP14.87□□□□□ -0.03
ATP6V0A1-225ENST00000592831 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
ATP6V0A1-225ENST00000592831 PELP1Q8IZL8 1130 aaKnown RBP14.8□□□□□ -0.04
ATP6V0A1-225ENST00000592831 RSF1Q96T23 1441 aaPredicted RBP14.74□□□□□ -0.05
ATP6V0A1-225ENST00000592831 BAZ1BQ9UIG0 1483 aaKnown RBP14.71□□□□□ -0.05
ATP6V0A1-225ENST00000592831 FAM50AQ14320 339 aaKnown RBP14.67□□□□□ -0.06
ATP6V0A1-225ENST00000592831 BAZ1AQ9NRL2 1556 aaPredicted RBP14.66□□□□□ -0.06
ATP6V0A1-225ENST00000592831 MYO15BQ96JP2 1530 aa14.66□□□□□ -0.06
ATP6V0A1-225ENST00000592831 P3H3Q8IVL6 736 aa14.65□□□□□ -0.06
ATP6V0A1-225ENST00000592831 CDK11AQ9UQ88 783 aaPredicted RBP14.62□□□□□ -0.07
ATP6V0A1-225ENST00000592831 CHMP7Q8WUX9 453 aaPredicted RBP14.57□□□□□ -0.08
ATP6V0A1-225ENST00000592831 CECR2Q9BXF3 1484 aa14.57□□□□□ -0.08
ATP6V0A1-225ENST00000592831 NPM1P06748 294 aaKnown RBP eCLIP14.56□□□□□ -0.08
ATP6V0A1-225ENST00000592831 ARID3CA6NKF2 412 aa14.53□□□□□ -0.08
ATP6V0A1-225ENST00000592831 TRIM52Q96A61 297 aa14.52□□□□□ -0.08
ATP6V0A1-225ENST00000592831 ERCC6Q03468 1493 aa14.48□□□□□ -0.09
ATP6V0A1-225ENST00000592831 WRNQ14191 1432 aaPredicted RBP eCLIP14.47□□□□□ -0.09
ATP6V0A1-225ENST00000592831 CENPBP07199 599 aaPredicted RBP14.46□□□□□ -0.09
ATP6V0A1-225ENST00000592831 POLR3GLQ9BT43 218 aa14.44□□□□□ -0.1
ATP6V0A1-225ENST00000592831 SMARCA2P51531 1590 aa14.42□□□□□ -0.1
ATP6V0A1-225ENST00000592831 EEA1Q15075 1411 aa14.42□□□□□ -0.1
ATP6V0A1-225ENST00000592831 ZNF777Q9ULD5 760 aaPredicted RBP14.41□□□□□ -0.1
ATP6V0A1-225ENST00000592831 MROH2BQ7Z745 1585 aa14.37□□□□□ -0.11
ATP6V0A1-225ENST00000592831 KIF27Q86VH2 1401 aa14.37□□□□□ -0.11
ATP6V0A1-225ENST00000592831 PDS5BQ9NTI5 1447 aa14.33□□□□□ -0.11
ATP6V0A1-225ENST00000592831 HRCP23327 699 aa14.31□□□□□ -0.12
ATP6V0A1-225ENST00000592831 ESF1Q9H501 851 aaKnown RBP14.3□□□□□ -0.12
ATP6V0A1-225ENST00000592831 NEUROD1Q13562 356 aa14.29□□□□□ -0.12
ATP6V0A1-225ENST00000592831 SLC4A1APQ9BWU0 796 aaKnown RBP14.27□□□□□ -0.12
ATP6V0A1-225ENST00000592831 CLIP1P30622 1438 aa14.26□□□□□ -0.13
ATP6V0A1-225ENST00000592831 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
ATP6V0A1-225ENST00000592831 MTUS2Q5JR59 1369 aa14.25□□□□□ -0.13
ATP6V0A1-225ENST00000592831 MYT1Q01538 1121 aa14.25□□□□□ -0.13
ATP6V0A1-225ENST00000592831 NEFLP07196 543 aa14.24□□□□□ -0.13
ATP6V0A1-225ENST00000592831 GOLGA3Q08378 1498 aa14.24□□□□□ -0.13
ATP6V0A1-225ENST00000592831 ATAD2BQ9ULI0 1458 aa14.23□□□□□ -0.13
ATP6V0A1-225ENST00000592831 CADPSQ9ULU8 1353 aa14.23□□□□□ -0.13
ATP6V0A1-225ENST00000592831 TSPY4P0CV99 314 aa14.22□□□□□ -0.13
ATP6V0A1-225ENST00000592831 TSPY10P0CW01 314 aa14.22□□□□□ -0.13
ATP6V0A1-225ENST00000592831 PLEKHD1A6NEE1 506 aa14.22□□□□□ -0.13
ATP6V0A1-225ENST00000592831 ZNF326Q5BKZ1 582 aaKnown RBP14.21□□□□□ -0.13
ATP6V0A1-225ENST00000592831 YTHDC1Q96MU7 727 aaKnown RBP14.2□□□□□ -0.14
ATP6V0A1-225ENST00000592831 CNGB1Q14028 1251 aaPredicted RBP14.18□□□□□ -0.14
ATP6V0A1-225ENST00000592831 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
ATP6V0A1-225ENST00000592831 CUX2O14529 1486 aa14.17□□□□□ -0.14
ATP6V0A1-225ENST00000592831 BCANQ96GW7 911 aa14.17□□□□□ -0.14
ATP6V0A1-225ENST00000592831 TOP2AP11388 1531 aaKnown RBP14.16□□□□□ -0.14
ATP6V0A1-225ENST00000592831 CARMIL1Q5VZK9 1371 aa14.15□□□□□ -0.14
ATP6V0A1-225ENST00000592831 KCNH8Q96L42 1107 aa14.15□□□□□ -0.14
ATP6V0A1-225ENST00000592831 SMARCA4P51532 1647 aa14.12□□□□□ -0.15
ATP6V0A1-225ENST00000592831 TNIKQ9UKE5 1360 aa14.12□□□□□ -0.15
ATP6V0A1-225ENST00000592831 SOGA1O94964 1423 aa14.12□□□□□ -0.15
ATP6V0A1-225ENST00000592831 STAG3Q9UJ98 1225 aa14.11□□□□□ -0.15
ATP6V0A1-225ENST00000592831 WIZO95785 1651 aa14.1□□□□□ -0.15
ATP6V0A1-225ENST00000592831 CHIC2Q9UKJ5 165 aa14.1□□□□□ -0.15
ATP6V0A1-225ENST00000592831 CEP162Q5TB80 1403 aa14.1□□□□□ -0.15
ATP6V0A1-225ENST00000592831 TDRD9Q8NDG6 1382 aaKnown RBP14.07□□□□□ -0.16
ATP6V0A1-225ENST00000592831 CHGAP10645 457 aaKnown RBP14.07□□□□□ -0.16
ATP6V0A1-225ENST00000592831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.05□□□□□ -0.16
ATP6V0A1-225ENST00000592831 CFDP1Q9UEE9 299 aaPredicted RBP14.03□□□□□ -0.16
ATP6V0A1-225ENST00000592831 NCAPD3P42695 1498 aa14.01□□□□□ -0.17
ATP6V0A1-225ENST00000592831 DIEXFQ68CQ4 756 aaKnown RBP14□□□□□ -0.17
ATP6V0A1-225ENST00000592831 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
ATP6V0A1-225ENST00000592831 ACIN1Q9UKV3 1341 aaKnown RBP14□□□□□ -0.17
ATP6V0A1-225ENST00000592831 FHAD1B1AJZ9 1412 aa14□□□□□ -0.17
ATP6V0A1-225ENST00000592831 TONSLQ96HA7 1378 aa13.99□□□□□ -0.17
ATP6V0A1-225ENST00000592831 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
ATP6V0A1-225ENST00000592831 ABCC8Q09428 1581 aa13.98□□□□□ -0.17
ATP6V0A1-225ENST00000592831 EIF4G1Q04637 1599 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms