RNA–Protein interactions for RNA: ENST00000589980.1

ABCA8-212, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 5

Gene ABCA8, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-212ENST00000589980 CLEC11AQ9Y240 323 aa13.8□□□□□ -0.2
ABCA8-212ENST00000589980 MRC2Q9UBG0 1479 aa13.79□□□□□ -0.2
ABCA8-212ENST00000589980 KIF21AQ7Z4S6 1674 aa13.78□□□□□ -0.2
ABCA8-212ENST00000589980 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
ABCA8-212ENST00000589980 WIZO95785 1651 aa13.75□□□□□ -0.21
ABCA8-212ENST00000589980 EVX2Q03828 476 aa13.74□□□□□ -0.21
ABCA8-212ENST00000589980 WDR62O43379 1518 aa13.74□□□□□ -0.21
ABCA8-212ENST00000589980 CEP164Q9UPV0 1460 aa13.73□□□□□ -0.21
ABCA8-212ENST00000589980 PRKAR2AP13861 404 aaKnown RBP13.7□□□□□ -0.22
ABCA8-212ENST00000589980 FANCD2Q9BXW9 1451 aa13.69□□□□□ -0.22
ABCA8-212ENST00000589980 RSF1Q96T23 1441 aaPredicted RBP13.69□□□□□ -0.22
ABCA8-212ENST00000589980 CFTRP13569 1480 aa13.68□□□□□ -0.22
ABCA8-212ENST00000589980 TOP2AP11388 1531 aaKnown RBP13.68□□□□□ -0.22
ABCA8-212ENST00000589980 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
ABCA8-212ENST00000589980 SP7Q8TDD2 431 aaPredicted RBP13.62□□□□□ -0.23
ABCA8-212ENST00000589980 HAX1O00165 279 aa13.61□□□□□ -0.23
ABCA8-212ENST00000589980 PRR29P0C7W0 189 aa13.6□□□□□ -0.23
ABCA8-212ENST00000589980 FKBP8Q14318 412 aa13.56□□□□□ -0.24
ABCA8-212ENST00000589980 C19orf67A6NJJ6 358 aa13.54□□□□□ -0.24
ABCA8-212ENST00000589980 PROM2Q8N271 834 aa13.54□□□□□ -0.24
ABCA8-212ENST00000589980 URB2Q14146 1524 aaKnown RBP13.53□□□□□ -0.24
ABCA8-212ENST00000589980 TRIM41Q8WV44 630 aa13.52□□□□□ -0.25
ABCA8-212ENST00000589980 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
ABCA8-212ENST00000589980 CREBZFQ9NS37 354 aa13.48□□□□□ -0.25
ABCA8-212ENST00000589980 IFT140Q96RY7 1462 aa13.48□□□□□ -0.25
ABCA8-212ENST00000589980 ABCC8Q09428 1581 aa13.47□□□□□ -0.25
ABCA8-212ENST00000589980 PRDM2Q13029 1718 aa13.45□□□□□ -0.26
ABCA8-212ENST00000589980 FARP1Q9Y4F1 1045 aaPredicted RBP13.43□□□□□ -0.26
ABCA8-212ENST00000589980 TOPBP1Q92547 1522 aa13.4□□□□□ -0.26
ABCA8-212ENST00000589980 STAG3Q9UJ98 1225 aa13.38□□□□□ -0.27
ABCA8-212ENST00000589980 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
ABCA8-212ENST00000589980 ZNF608Q9ULD9 1512 aaPredicted RBP13.36□□□□□ -0.27
ABCA8-212ENST00000589980 MNX1P50219 401 aaPredicted RBP13.35□□□□□ -0.27
ABCA8-212ENST00000589980 EIF4G3O43432 1585 aaKnown RBP13.31□□□□□ -0.28
ABCA8-212ENST00000589980 GABBR2O75899 941 aa13.28□□□□□ -0.28
ABCA8-212ENST00000589980 POLA1P09884 1462 aaPredicted RBP13.27□□□□□ -0.29
ABCA8-212ENST00000589980 RIMBP3CA6NJZ7 1639 aa13.27□□□□□ -0.29
ABCA8-212ENST00000589980 RIMBP3BA6NNM3 1639 aa13.27□□□□□ -0.29
ABCA8-212ENST00000589980 RIMBP3Q9UFD9 1639 aa13.27□□□□□ -0.29
ABCA8-212ENST00000589980 ARHGEF11O15085 1522 aa13.26□□□□□ -0.29
ABCA8-212ENST00000589980 TARBP1Q13395 1621 aaKnown RBP13.25□□□□□ -0.29
ABCA8-212ENST00000589980 AQRO60306 1485 aaKnown RBP eCLIP13.25□□□□□ -0.29
ABCA8-212ENST00000589980 CD44P16070 742 aaKnown RBP13.25□□□□□ -0.29
ABCA8-212ENST00000589980 WDR97A6NE52 1622 aa13.24□□□□□ -0.29
ABCA8-212ENST00000589980 SOGA1O94964 1423 aa13.23□□□□□ -0.29
ABCA8-212ENST00000589980 FGD5Q6ZNL6 1462 aa13.18□□□□□ -0.3
ABCA8-212ENST00000589980 RAD54L2Q9Y4B4 1467 aa13.18□□□□□ -0.3
ABCA8-212ENST00000589980 TDRD9Q8NDG6 1382 aaKnown RBP13.18□□□□□ -0.3
ABCA8-212ENST00000589980 CYB5RLQ6IPT4 315 aa13.17□□□□□ -0.3
ABCA8-212ENST00000589980 MAGI1Q96QZ7 1491 aaPredicted RBP13.16□□□□□ -0.3
ABCA8-212ENST00000589980 POTEIP0CG38 1075 aa13.15□□□□□ -0.3
ABCA8-212ENST00000589980 CHMP7Q8WUX9 453 aaPredicted RBP13.15□□□□□ -0.3
ABCA8-212ENST00000589980 CHD1O14646 1710 aa13.15□□□□□ -0.3
ABCA8-212ENST00000589980 GRIN2BQ13224 1484 aa13.15□□□□□ -0.3
ABCA8-212ENST00000589980 SNAPC4Q5SXM2 1469 aa13.15□□□□□ -0.3
ABCA8-212ENST00000589980 SYNJ1O43426 1573 aa13.12□□□□□ -0.31
ABCA8-212ENST00000589980 MIER1Q8N108 512 aa13.12□□□□□ -0.31
ABCA8-212ENST00000589980 CUX1P39880 1505 aa13.12□□□□□ -0.31
ABCA8-212ENST00000589980 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
ABCA8-212ENST00000589980 ZNF579Q8NAF0 562 aaKnown RBP13.1□□□□□ -0.31
ABCA8-212ENST00000589980 ZRANB1Q9UGI0 708 aa13.1□□□□□ -0.31
ABCA8-212ENST00000589980 SYNJ2O15056 1496 aa13.1□□□□□ -0.31
ABCA8-212ENST00000589980 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
ABCA8-212ENST00000589980 CLASP1Q7Z460 1538 aa13.07□□□□□ -0.32
ABCA8-212ENST00000589980 ABCA10Q8WWZ4 1543 aa13.06□□□□□ -0.32
ABCA8-212ENST00000589980 SUPT5HO00267 1087 aaKnown RBP13.05□□□□□ -0.32
ABCA8-212ENST00000589980 PLCD3Q8N3E9 789 aa13.04□□□□□ -0.32
ABCA8-212ENST00000589980 WRNQ14191 1432 aaPredicted RBP eCLIP13.03□□□□□ -0.32
ABCA8-212ENST00000589980 PHF12Q96QT6 1004 aa13.02□□□□□ -0.33
ABCA8-212ENST00000589980 FBXO3Q9UK99 471 aa13.02□□□□□ -0.33
ABCA8-212ENST00000589980 GALR2O43603 387 aaPredicted RBP13□□□□□ -0.33
ABCA8-212ENST00000589980 PBRM1Q86U86 1689 aa12.99□□□□□ -0.33
ABCA8-212ENST00000589980 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
ABCA8-212ENST00000589980 NPM1P06748 294 aaKnown RBP eCLIP12.99□□□□□ -0.33
ABCA8-212ENST00000589980 GRIN2AQ12879 1464 aa12.95□□□□□ -0.34
ABCA8-212ENST00000589980 PLEKHG5O94827 1062 aa12.94□□□□□ -0.34
ABCA8-212ENST00000589980 VASPP50552 380 aaPredicted RBP12.94□□□□□ -0.34
ABCA8-212ENST00000589980 TOP2BQ02880 1626 aa12.94□□□□□ -0.34
ABCA8-212ENST00000589980 FHAD1B1AJZ9 1412 aa12.93□□□□□ -0.34
ABCA8-212ENST00000589980 RASEFQ8IZ41 740 aa12.92□□□□□ -0.34
ABCA8-212ENST00000589980 BIVM-ERCC5R4GMW8 1640 aa12.91□□□□□ -0.34
ABCA8-212ENST00000589980 ADAMTS12P58397 1594 aa12.91□□□□□ -0.34
ABCA8-212ENST00000589980 NUP160Q12769 1436 aa12.91□□□□□ -0.34
ABCA8-212ENST00000589980 CLCN6P51797 869 aa12.91□□□□□ -0.34
ABCA8-212ENST00000589980 CCDC61Q9Y6R9 512 aa12.91□□□□□ -0.34
ABCA8-212ENST00000589980 ERICH3Q5RHP9 1530 aa12.9□□□□□ -0.34
ABCA8-212ENST00000589980 TSPYL2Q9H2G4 693 aaPredicted RBP12.88□□□□□ -0.35
ABCA8-212ENST00000589980 NUBP1P53384 320 aa12.87□□□□□ -0.35
ABCA8-212ENST00000589980 CEP170Q5SW79 1584 aa12.86□□□□□ -0.35
ABCA8-212ENST00000589980 MS4A3Q96HJ5 214 aa12.84□□□□□ -0.35
ABCA8-212ENST00000589980 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
ABCA8-212ENST00000589980 PELP1Q8IZL8 1130 aaKnown RBP12.83□□□□□ -0.36
ABCA8-212ENST00000589980 KIF12Q96FN5 646 aa12.82□□□□□ -0.36
ABCA8-212ENST00000589980 SHROOM2Q13796 1616 aa12.81□□□□□ -0.36
ABCA8-212ENST00000589980 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
ABCA8-212ENST00000589980 IFNLR1Q8IU57 520 aaPredicted RBP12.8□□□□□ -0.36
ABCA8-212ENST00000589980 ERCC6L2Q5T890 1561 aa12.79□□□□□ -0.36
ABCA8-212ENST00000589980 PRG4Q92954 1404 aaPredicted RBP12.79□□□□□ -0.36
ABCA8-212ENST00000589980 LHX8Q68G74 356 aa12.78□□□□□ -0.36
ABCA8-212ENST00000589980 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms