RNA–Protein interactions for RNA: ENST00000589980.1

ABCA8-212, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 5

Gene ABCA8, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-212ENST00000589980 AEBP2Q6ZN18 517 aaPredicted RBP26.19■■□□□ 1.78
ABCA8-212ENST00000589980 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
ABCA8-212ENST00000589980 SENP3Q9H4L4 574 aaPredicted RBP22.02■■□□□ 1.12
ABCA8-212ENST00000589980 PHF23Q9BUL5 403 aaPredicted RBP21.99■■□□□ 1.11
ABCA8-212ENST00000589980 FOXD1Q16676 465 aa20.69■□□□□ 0.9
ABCA8-212ENST00000589980 PLPPR3Q6T4P5 718 aa19.83■□□□□ 0.77
ABCA8-212ENST00000589980 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
ABCA8-212ENST00000589980 ADRA2BP18089 450 aa19.45■□□□□ 0.7
ABCA8-212ENST00000589980 PIAS4Q8N2W9 510 aaPredicted RBP19.22■□□□□ 0.67
ABCA8-212ENST00000589980 MSH5O43196 834 aa19.07■□□□□ 0.64
ABCA8-212ENST00000589980 POTEDQ86YR6 584 aa18.5■□□□□ 0.55
ABCA8-212ENST00000589980 NISCHQ9Y2I1 1504 aa18.18■□□□□ 0.5
ABCA8-212ENST00000589980 MAPK8IP2Q13387 824 aaPredicted RBP17.87■□□□□ 0.45
ABCA8-212ENST00000589980 DMRT2Q9Y5R5 561 aa17.58■□□□□ 0.4
ABCA8-212ENST00000589980 PPP4R3CPQ6ZMV5 832 aa17.49■□□□□ 0.39
ABCA8-212ENST00000589980 SCAF1Q9H7N4 1312 aaKnown RBP17.48■□□□□ 0.39
ABCA8-212ENST00000589980 CNKSR2Q8WXI2 1034 aa17.07■□□□□ 0.32
ABCA8-212ENST00000589980 HOXD11P31277 338 aaPredicted RBP17.04■□□□□ 0.32
ABCA8-212ENST00000589980 RNF216Q9NWF9 866 aaPredicted RBP16.89■□□□□ 0.29
ABCA8-212ENST00000589980 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
ABCA8-212ENST00000589980 NPM3O75607 178 aaKnown RBP16.68■□□□□ 0.26
ABCA8-212ENST00000589980 NCBP3Q53F19 620 aaKnown RBP16.68■□□□□ 0.26
ABCA8-212ENST00000589980 KCNA4P22459 653 aa16.66■□□□□ 0.26
ABCA8-212ENST00000589980 RNF39Q9H2S5 420 aa16.43■□□□□ 0.22
ABCA8-212ENST00000589980 ABCC9O60706 1549 aa16.35■□□□□ 0.21
ABCA8-212ENST00000589980 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
ABCA8-212ENST00000589980 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
ABCA8-212ENST00000589980 CACNB1Q02641 598 aaPredicted RBP16.27■□□□□ 0.2
ABCA8-212ENST00000589980 C1QBPQ07021 282 aaKnown RBP16.09■□□□□ 0.17
ABCA8-212ENST00000589980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.06■□□□□ 0.16
ABCA8-212ENST00000589980 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
ABCA8-212ENST00000589980 U3KPZ7 1027 aaPredicted RBP15.93■□□□□ 0.14
ABCA8-212ENST00000589980 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
ABCA8-212ENST00000589980 SPINK5Q9NQ38 1064 aaPredicted RBP15.66■□□□□ 0.1
ABCA8-212ENST00000589980 RB1CC1Q8TDY2 1594 aa15.61■□□□□ 0.09
ABCA8-212ENST00000589980 NACADO15069 1562 aa15.49■□□□□ 0.07
ABCA8-212ENST00000589980 DSG3P32926 999 aa15.46■□□□□ 0.07
ABCA8-212ENST00000589980 CAPN15O75808 1086 aa15.44■□□□□ 0.06
ABCA8-212ENST00000589980 ZBTB22O15209 634 aa15.37■□□□□ 0.05
ABCA8-212ENST00000589980 DCAF8L2P0C7V8 631 aa15.37■□□□□ 0.05
ABCA8-212ENST00000589980 FOXD4L1Q9NU39 408 aa15.32■□□□□ 0.04
ABCA8-212ENST00000589980 MYO15BQ96JP2 1530 aa15.3■□□□□ 0.04
ABCA8-212ENST00000589980 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
ABCA8-212ENST00000589980 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.04
ABCA8-212ENST00000589980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
ABCA8-212ENST00000589980 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
ABCA8-212ENST00000589980 SAMD1Q6SPF0 538 aaPredicted RBP15.24■□□□□ 0.03
ABCA8-212ENST00000589980 ABCB7O75027 752 aa15.2■□□□□ 0.02
ABCA8-212ENST00000589980 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
ABCA8-212ENST00000589980 ZNF219Q9P2Y4 722 aaPredicted RBP15.17■□□□□ 0.02
ABCA8-212ENST00000589980 ATF5Q9Y2D1 282 aaPredicted RBP15.17■□□□□ 0.02
ABCA8-212ENST00000589980 APLP2Q06481 763 aa15.13■□□□□ 0.01
ABCA8-212ENST00000589980 EHMT2Q96KQ7 1210 aa15.07■□□□□ 0
ABCA8-212ENST00000589980 ZCCHC6Q5VYS8 1495 aaKnown RBP15.07■□□□□ 0
ABCA8-212ENST00000589980 DCAF1Q9Y4B6 1507 aa15.07■□□□□ 0
ABCA8-212ENST00000589980 UNC13AQ9UPW8 1703 aa15.06■□□□□ 0
ABCA8-212ENST00000589980 BICRAQ9NZM4 1560 aa15.04■□□□□ -0
ABCA8-212ENST00000589980 SHROOM4Q9ULL8 1493 aa15.03■□□□□ -0
ABCA8-212ENST00000589980 CSRNP3Q8WYN3 585 aa15□□□□□ -0.01
ABCA8-212ENST00000589980 POLA2Q14181 598 aa14.95□□□□□ -0.02
ABCA8-212ENST00000589980 SCRIBQ14160 1630 aa14.84□□□□□ -0.03
ABCA8-212ENST00000589980 CECR2Q9BXF3 1484 aa14.77□□□□□ -0.04
ABCA8-212ENST00000589980 CC2D2AQ9P2K1 1620 aa14.75□□□□□ -0.05
ABCA8-212ENST00000589980 ATXN8OSP0DMR3 200 aa14.75□□□□□ -0.05
ABCA8-212ENST00000589980 EIF4G1Q04637 1599 aaKnown RBP14.74□□□□□ -0.05
ABCA8-212ENST00000589980 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
ABCA8-212ENST00000589980 POTEHQ6S545 545 aa14.47□□□□□ -0.09
ABCA8-212ENST00000589980 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
ABCA8-212ENST00000589980 MKRN4PQ13434 485 aaPredicted RBP14.46□□□□□ -0.09
ABCA8-212ENST00000589980 ZBTB12Q9Y330 459 aaPredicted RBP14.46□□□□□ -0.09
ABCA8-212ENST00000589980 AKT1S1Q96B36 256 aa14.34□□□□□ -0.11
ABCA8-212ENST00000589980 NCAPD3P42695 1498 aa14.3□□□□□ -0.12
ABCA8-212ENST00000589980 REM2Q8IYK8 340 aaPredicted RBP14.27□□□□□ -0.13
ABCA8-212ENST00000589980 CHRDL2Q6WN34 429 aa14.26□□□□□ -0.13
ABCA8-212ENST00000589980 SMARCA2P51531 1590 aa14.22□□□□□ -0.13
ABCA8-212ENST00000589980 FBLN2P98095 1184 aa14.22□□□□□ -0.13
ABCA8-212ENST00000589980 ATAD2BQ9ULI0 1458 aa14.22□□□□□ -0.13
ABCA8-212ENST00000589980 CUX2O14529 1486 aa14.19□□□□□ -0.14
ABCA8-212ENST00000589980 ERCC6Q03468 1493 aa14.19□□□□□ -0.14
ABCA8-212ENST00000589980 HMGXB3Q12766 1538 aa14.19□□□□□ -0.14
ABCA8-212ENST00000589980 DNAJC5Q9H3Z4 198 aa14.18□□□□□ -0.14
ABCA8-212ENST00000589980 SMARCA4P51532 1647 aa14.17□□□□□ -0.14
ABCA8-212ENST00000589980 BAZ1AQ9NRL2 1556 aaPredicted RBP14.16□□□□□ -0.14
ABCA8-212ENST00000589980 SPDYE2BA6NHP3 402 aa14.15□□□□□ -0.14
ABCA8-212ENST00000589980 SPDYE6P0CI01 402 aa14.15□□□□□ -0.14
ABCA8-212ENST00000589980 SPDYE2Q495Y8 402 aa14.15□□□□□ -0.14
ABCA8-212ENST00000589980 PITPNM1O00562 1244 aa14.13□□□□□ -0.15
ABCA8-212ENST00000589980 BAZ1BQ9UIG0 1483 aaKnown RBP14.11□□□□□ -0.15
ABCA8-212ENST00000589980 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
ABCA8-212ENST00000589980 PEG3Q9GZU2 1588 aa14.06□□□□□ -0.16
ABCA8-212ENST00000589980 PIP4P2Q8N4L2 257 aa14.04□□□□□ -0.16
ABCA8-212ENST00000589980 ZNF692Q9BU19 519 aaPredicted RBP14.02□□□□□ -0.17
ABCA8-212ENST00000589980 FXR2P51116 673 aaKnown RBP eCLIP14.01□□□□□ -0.17
ABCA8-212ENST00000589980 NESP48681 1621 aa13.99□□□□□ -0.17
ABCA8-212ENST00000589980 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
ABCA8-212ENST00000589980 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
ABCA8-212ENST00000589980 PDS5BQ9NTI5 1447 aa13.95□□□□□ -0.18
ABCA8-212ENST00000589980 THOC2Q8NI27 1593 aaKnown RBP13.88□□□□□ -0.19
ABCA8-212ENST00000589980 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
ABCA8-212ENST00000589980 SPDYE1Q8NFV5 336 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms