RNA–Protein interactions for RNA: ENST00000589863.5

SAFB-207, Transcript of scaffold attachment factor B, humanhuman

TSL 2

Gene SAFB, Length 2,708 nt, Biotype nonsense mediated decay, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-207ENST00000589863 LRRC9Q6ZRR7 1453 aa24.57■■□□□ 1.52
SAFB-207ENST00000589863 SIN3AQ96ST3 1273 aa24.54■■□□□ 1.52
SAFB-207ENST00000589863 KCNH8Q96L42 1107 aa24.53■■□□□ 1.52
SAFB-207ENST00000589863 SETD5Q9C0A6 1442 aa24.51■■□□□ 1.51
SAFB-207ENST00000589863 RAD54L2Q9Y4B4 1467 aa24.49■■□□□ 1.51
SAFB-207ENST00000589863 MAP3K1Q13233 1512 aa24.49■■□□□ 1.51
SAFB-207ENST00000589863 FHOD3Q2V2M9 1422 aa24.48■■□□□ 1.51
SAFB-207ENST00000589863 FANCD2Q9BXW9 1451 aa24.47■■□□□ 1.51
SAFB-207ENST00000589863 PCF11O94913 1555 aaKnown RBP24.46■■□□□ 1.51
SAFB-207ENST00000589863 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
SAFB-207ENST00000589863 SUPT16HQ9Y5B9 1047 aaKnown RBP24.44■■□□□ 1.5
SAFB-207ENST00000589863 CC2D2AQ9P2K1 1620 aa24.41■■□□□ 1.5
SAFB-207ENST00000589863 WDR97A6NE52 1622 aa24.38■■□□□ 1.49
SAFB-207ENST00000589863 HIRIP3Q9BW71 556 aaPredicted RBP24.38■■□□□ 1.49
SAFB-207ENST00000589863 DDX10Q13206 875 aaKnown RBP24.37■■□□□ 1.49
SAFB-207ENST00000589863 NESP48681 1621 aa24.36■■□□□ 1.49
SAFB-207ENST00000589863 POLA1P09884 1462 aaPredicted RBP24.35■■□□□ 1.49
SAFB-207ENST00000589863 CFAP43Q8NDM7 1665 aa24.34■■□□□ 1.49
SAFB-207ENST00000589863 TOPBP1Q92547 1522 aa24.31■■□□□ 1.48
SAFB-207ENST00000589863 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
SAFB-207ENST00000589863 DNMBPQ6XZF7 1577 aa24.29■■□□□ 1.48
SAFB-207ENST00000589863 CASKIN1Q8WXD9 1431 aa24.26■■□□□ 1.47
SAFB-207ENST00000589863 FYCO1Q9BQS8 1478 aa24.26■■□□□ 1.47
SAFB-207ENST00000589863 DNAJC5BQ9UF47 199 aa24.26■■□□□ 1.47
SAFB-207ENST00000589863 PPP1R15AO75807 674 aaPredicted RBP24.2■■□□□ 1.47
SAFB-207ENST00000589863 EFCAB5A4FU69 1503 aa24.2■■□□□ 1.46
SAFB-207ENST00000589863 TDRD9Q8NDG6 1382 aaKnown RBP24.2■■□□□ 1.46
SAFB-207ENST00000589863 FGD6Q6ZV73 1430 aa24.18■■□□□ 1.46
SAFB-207ENST00000589863 MTUS2Q5JR59 1369 aa24.17■■□□□ 1.46
SAFB-207ENST00000589863 PTPRKQ15262 1439 aa24.16■■□□□ 1.46
SAFB-207ENST00000589863 AQRO60306 1485 aaKnown RBP eCLIP24.15■■□□□ 1.461e-7■■■■□ 25.6
SAFB-207ENST00000589863 SNAPC4Q5SXM2 1469 aa24.14■■□□□ 1.46
SAFB-207ENST00000589863 FMN1Q68DA7 1419 aa24.14■■□□□ 1.45
SAFB-207ENST00000589863 BCANQ96GW7 911 aa24.13■■□□□ 1.45
SAFB-207ENST00000589863 CUL7Q14999 1698 aa24.13■■□□□ 1.45
SAFB-207ENST00000589863 CTTNBP2Q8WZ74 1663 aa24.13■■□□□ 1.45
SAFB-207ENST00000589863 TIMELESSQ9UNS1 1208 aa24.12■■□□□ 1.45
SAFB-207ENST00000589863 URB2Q14146 1524 aaKnown RBP24.12■■□□□ 1.45
SAFB-207ENST00000589863 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.12■■□□□ 1.45
SAFB-207ENST00000589863 CCDC18Q5T9S5 1454 aa24.1■■□□□ 1.45
SAFB-207ENST00000589863 TONSLQ96HA7 1378 aa24.08■■□□□ 1.44
SAFB-207ENST00000589863 TRIM52Q96A61 297 aa24.06■■□□□ 1.44
SAFB-207ENST00000589863 TSHZ2Q9NRE2 1034 aa24.06■■□□□ 1.44
SAFB-207ENST00000589863 NCOA2Q15596 1464 aa24.03■■□□□ 1.44
SAFB-207ENST00000589863 FKBP8Q14318 412 aa24.03■■□□□ 1.44
SAFB-207ENST00000589863 LRRIQ1Q96JM4 1722 aa24.03■■□□□ 1.44
SAFB-207ENST00000589863 HFM1A2PYH4 1435 aa24.03■■□□□ 1.44
SAFB-207ENST00000589863 GAPVD1Q14C86 1478 aa24.01■■□□□ 1.43
SAFB-207ENST00000589863 ANP32CO43423 234 aa24.01■■□□□ 1.43
SAFB-207ENST00000589863 MYT1Q01538 1121 aa24■■□□□ 1.43
SAFB-207ENST00000589863 NAIPQ13075 1403 aa24■■□□□ 1.43
SAFB-207ENST00000589863 UACAQ9BZF9 1416 aa24■■□□□ 1.43
SAFB-207ENST00000589863 CHIC2Q9UKJ5 165 aa23.99■■□□□ 1.43
SAFB-207ENST00000589863 MYOM3Q5VTT5 1437 aa23.99■■□□□ 1.43
SAFB-207ENST00000589863 PTPN23Q9H3S7 1636 aa23.99■■□□□ 1.43
SAFB-207ENST00000589863 RRP7BPQ9NSQ0 103 aa23.98■■□□□ 1.43
SAFB-207ENST00000589863 SAMD9Q5K651 1589 aa23.98■■□□□ 1.43
SAFB-207ENST00000589863 GRIN2BQ13224 1484 aa23.98■■□□□ 1.43
SAFB-207ENST00000589863 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
SAFB-207ENST00000589863 ARID3CA6NKF2 412 aa23.95■■□□□ 1.42
SAFB-207ENST00000589863 CCER2I3L3R5 266 aa23.93■■□□□ 1.42
SAFB-207ENST00000589863 MAGI3Q5TCQ9 1506 aa23.92■■□□□ 1.42
SAFB-207ENST00000589863 LAMC3Q9Y6N6 1575 aa23.92■■□□□ 1.42
SAFB-207ENST00000589863 SUPT6HQ7KZ85 1726 aaKnown RBP23.87■■□□□ 1.41
SAFB-207ENST00000589863 EHBP1L1Q8N3D4 1523 aa23.85■■□□□ 1.41
SAFB-207ENST00000589863 KDM5BQ9UGL1 1544 aa23.85■■□□□ 1.41
SAFB-207ENST00000589863 UGGT2Q9NYU1 1516 aa23.84■■□□□ 1.41
SAFB-207ENST00000589863 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
SAFB-207ENST00000589863 FOXD1Q16676 465 aa23.81■■□□□ 1.4
SAFB-207ENST00000589863 DENND4BO75064 1496 aaPredicted RBP23.8■■□□□ 1.4
SAFB-207ENST00000589863 NEFLP07196 543 aa23.8■■□□□ 1.4
SAFB-207ENST00000589863 THOC2Q8NI27 1593 aaKnown RBP23.79■■□□□ 1.4
SAFB-207ENST00000589863 ARHGEF11O15085 1522 aa23.78■■□□□ 1.4
SAFB-207ENST00000589863 KIF21AQ7Z4S6 1674 aa23.78■■□□□ 1.4
SAFB-207ENST00000589863 HSPA5P11021 654 aaKnown RBP23.78■■□□□ 1.4
SAFB-207ENST00000589863 KDM6BO15054 1643 aa23.77■■□□□ 1.4
SAFB-207ENST00000589863 CDK13Q14004 1512 aaKnown RBP23.76■■□□□ 1.39
SAFB-207ENST00000589863 WASHC2AQ641Q2 1341 aa23.76■■□□□ 1.39
SAFB-207ENST00000589863 TARBP1Q13395 1621 aaKnown RBP23.74■■□□□ 1.39
SAFB-207ENST00000589863 EPRSP07814 1512 aaKnown RBP23.73■■□□□ 1.39
SAFB-207ENST00000589863 HNRNPUQ00839 825 aaKnown RBP eCLIP23.72■■□□□ 1.394e-7■□□□□ 8.3
SAFB-207ENST00000589863 MPHOSPH9Q99550 1183 aa23.72■■□□□ 1.39
SAFB-207ENST00000589863 TCOF1Q13428 1488 aaKnown RBP23.7■■□□□ 1.39
SAFB-207ENST00000589863 L3MBTL2Q969R5 705 aa23.69■■□□□ 1.38
SAFB-207ENST00000589863 HECW1Q76N89 1606 aa23.68■■□□□ 1.38
SAFB-207ENST00000589863 IQGAP2Q13576 1575 aa23.67■■□□□ 1.38
SAFB-207ENST00000589863 C11orf95C9JLR9 678 aaPredicted RBP23.66■■□□□ 1.38
SAFB-207ENST00000589863 EIF4G2P78344 907 aaKnown RBP eCLIP23.66■■□□□ 1.38
SAFB-207ENST00000589863 IRX6P78412 446 aaPredicted RBP23.66■■□□□ 1.38
SAFB-207ENST00000589863 CCDC184Q52MB2 194 aa23.66■■□□□ 1.38
SAFB-207ENST00000589863 ZNF644Q9H582 1327 aaPredicted RBP23.65■■□□□ 1.38
SAFB-207ENST00000589863 GCC2Q8IWJ2 1684 aa23.64■■□□□ 1.38
SAFB-207ENST00000589863 PBRM1Q86U86 1689 aa23.62■■□□□ 1.37
SAFB-207ENST00000589863 WDR62O43379 1518 aa23.6■■□□□ 1.37
SAFB-207ENST00000589863 MIA2Q96PC5 1412 aa23.59■■□□□ 1.37
SAFB-207ENST00000589863 RBM19Q9Y4C8 960 aaKnown RBP23.59■■□□□ 1.37
SAFB-207ENST00000589863 NBPF8Q3BBV2 869 aa23.59■■□□□ 1.37
SAFB-207ENST00000589863 ADAMTS12P58397 1594 aa23.59■■□□□ 1.37
SAFB-207ENST00000589863 AKNAQ7Z591 1439 aa23.58■■□□□ 1.37
SAFB-207ENST00000589863 ANP32EQ9BTT0 268 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms