RNA–Protein interactions for RNA: ENST00000587881.1

NEDD4L-220, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-220ENST00000587881 ABCA10Q8WWZ4 1543 aa20.95■□□□□ 0.94
NEDD4L-220ENST00000587881 ITGAEP38570 1179 aa20.92■□□□□ 0.94
NEDD4L-220ENST00000587881 CFAP43Q8NDM7 1665 aa20.9■□□□□ 0.94
NEDD4L-220ENST00000587881 TOPBP1Q92547 1522 aa20.9■□□□□ 0.94
NEDD4L-220ENST00000587881 RAB3GAP2Q9H2M9 1393 aa20.89■□□□□ 0.93
NEDD4L-220ENST00000587881 POLA1P09884 1462 aaPredicted RBP20.88■□□□□ 0.93
NEDD4L-220ENST00000587881 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
NEDD4L-220ENST00000587881 CUL7Q14999 1698 aa20.88■□□□□ 0.93
NEDD4L-220ENST00000587881 SETD5Q9C0A6 1442 aa20.87■□□□□ 0.93
NEDD4L-220ENST00000587881 EFCAB5A4FU69 1503 aa20.87■□□□□ 0.93
NEDD4L-220ENST00000587881 PHLDB1Q86UU1 1377 aa20.86■□□□□ 0.93
NEDD4L-220ENST00000587881 PCF11O94913 1555 aaKnown RBP20.85■□□□□ 0.93
NEDD4L-220ENST00000587881 AQRO60306 1485 aaKnown RBP eCLIP20.83■□□□□ 0.924e-8■■■□□ 16.6
NEDD4L-220ENST00000587881 FYCO1Q9BQS8 1478 aa20.83■□□□□ 0.92
NEDD4L-220ENST00000587881 P3H3Q8IVL6 736 aa20.82■□□□□ 0.92
NEDD4L-220ENST00000587881 CTTNBP2Q8WZ74 1663 aa20.81■□□□□ 0.92
NEDD4L-220ENST00000587881 CASKIN1Q8WXD9 1431 aa20.81■□□□□ 0.92
NEDD4L-220ENST00000587881 NESP48681 1621 aa20.8■□□□□ 0.92
NEDD4L-220ENST00000587881 MAPKBP1O60336 1514 aa20.8■□□□□ 0.92
NEDD4L-220ENST00000587881 FHOD3Q2V2M9 1422 aa20.79■□□□□ 0.92
NEDD4L-220ENST00000587881 LAMC3Q9Y6N6 1575 aa20.78■□□□□ 0.92
NEDD4L-220ENST00000587881 FAM50AQ14320 339 aaKnown RBP20.77■□□□□ 0.92
NEDD4L-220ENST00000587881 ATP1B4Q9UN42 357 aaPredicted RBP20.77■□□□□ 0.92
NEDD4L-220ENST00000587881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.77■□□□□ 0.911e-7■■□□□ 13.9
NEDD4L-220ENST00000587881 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
NEDD4L-220ENST00000587881 FMN1Q68DA7 1419 aa20.74■□□□□ 0.91
NEDD4L-220ENST00000587881 URB2Q14146 1524 aaKnown RBP20.71■□□□□ 0.91
NEDD4L-220ENST00000587881 TIMELESSQ9UNS1 1208 aa20.7■□□□□ 0.9
NEDD4L-220ENST00000587881 ABCA5Q8WWZ7 1642 aa20.67■□□□□ 0.9
NEDD4L-220ENST00000587881 PDS5BQ9NTI5 1447 aa20.64■□□□□ 0.9
NEDD4L-220ENST00000587881 SNAPC4Q5SXM2 1469 aa20.64■□□□□ 0.89
NEDD4L-220ENST00000587881 SAMD9Q5K651 1589 aa20.64■□□□□ 0.89
NEDD4L-220ENST00000587881 GAPVD1Q14C86 1478 aa20.64■□□□□ 0.89
NEDD4L-220ENST00000587881 TDRD9Q8NDG6 1382 aaKnown RBP20.62■□□□□ 0.89
NEDD4L-220ENST00000587881 FGD6Q6ZV73 1430 aa20.62■□□□□ 0.89
NEDD4L-220ENST00000587881 SIN3AQ96ST3 1273 aa20.61■□□□□ 0.89
NEDD4L-220ENST00000587881 MTUS2Q5JR59 1369 aa20.59■□□□□ 0.89
NEDD4L-220ENST00000587881 THOC2Q8NI27 1593 aaKnown RBP20.56■□□□□ 0.88
NEDD4L-220ENST00000587881 GRIN2BQ13224 1484 aa20.55■□□□□ 0.88
NEDD4L-220ENST00000587881 LRRIQ1Q96JM4 1722 aa20.54■□□□□ 0.88
NEDD4L-220ENST00000587881 PPP1R15AO75807 674 aaPredicted RBP20.52■□□□□ 0.88
NEDD4L-220ENST00000587881 KIF21AQ7Z4S6 1674 aa20.51■□□□□ 0.87
NEDD4L-220ENST00000587881 SUPT6HQ7KZ85 1726 aaKnown RBP20.51■□□□□ 0.87
NEDD4L-220ENST00000587881 HFM1A2PYH4 1435 aa20.51■□□□□ 0.87
NEDD4L-220ENST00000587881 MYOM3Q5VTT5 1437 aa20.5■□□□□ 0.87
NEDD4L-220ENST00000587881 NCOA2Q15596 1464 aa20.5■□□□□ 0.87
NEDD4L-220ENST00000587881 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
NEDD4L-220ENST00000587881 CCDC18Q5T9S5 1454 aa20.49■□□□□ 0.87
NEDD4L-220ENST00000587881 EHBP1L1Q8N3D4 1523 aa20.48■□□□□ 0.87
NEDD4L-220ENST00000587881 UACAQ9BZF9 1416 aa20.47■□□□□ 0.87
NEDD4L-220ENST00000587881 PTPN23Q9H3S7 1636 aa20.46■□□□□ 0.87
NEDD4L-220ENST00000587881 PTPRKQ15262 1439 aa20.45■□□□□ 0.86
NEDD4L-220ENST00000587881 DDX10Q13206 875 aaKnown RBP20.44■□□□□ 0.86
NEDD4L-220ENST00000587881 UGGT2Q9NYU1 1516 aa20.42■□□□□ 0.86
NEDD4L-220ENST00000587881 ARHGEF11O15085 1522 aa20.41■□□□□ 0.86
NEDD4L-220ENST00000587881 NAIPQ13075 1403 aa20.41■□□□□ 0.86
NEDD4L-220ENST00000587881 PBRM1Q86U86 1689 aa20.41■□□□□ 0.86
NEDD4L-220ENST00000587881 TONSLQ96HA7 1378 aa20.41■□□□□ 0.86
NEDD4L-220ENST00000587881 SUPT16HQ9Y5B9 1047 aaKnown RBP20.4■□□□□ 0.86
NEDD4L-220ENST00000587881 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.85
NEDD4L-220ENST00000587881 HECW1Q76N89 1606 aa20.38■□□□□ 0.85
NEDD4L-220ENST00000587881 KCNH8Q96L42 1107 aa20.37■□□□□ 0.85
NEDD4L-220ENST00000587881 IQGAP2Q13576 1575 aa20.36■□□□□ 0.85
NEDD4L-220ENST00000587881 TCOF1Q13428 1488 aaKnown RBP20.36■□□□□ 0.85
NEDD4L-220ENST00000587881 MAGI3Q5TCQ9 1506 aa20.35■□□□□ 0.85
NEDD4L-220ENST00000587881 ADAMTS12P58397 1594 aa20.33■□□□□ 0.84
NEDD4L-220ENST00000587881 CCER2I3L3R5 266 aa20.33■□□□□ 0.84
NEDD4L-220ENST00000587881 EPRSP07814 1512 aaKnown RBP20.31■□□□□ 0.84
NEDD4L-220ENST00000587881 ANP32CO43423 234 aa20.3■□□□□ 0.84
NEDD4L-220ENST00000587881 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
NEDD4L-220ENST00000587881 MIA2Q96PC5 1412 aa20.29■□□□□ 0.84
NEDD4L-220ENST00000587881 HIRIP3Q9BW71 556 aaPredicted RBP20.29■□□□□ 0.84
NEDD4L-220ENST00000587881 GCC2Q8IWJ2 1684 aa20.29■□□□□ 0.84
NEDD4L-220ENST00000587881 AKNAQ7Z591 1439 aa20.29■□□□□ 0.84
NEDD4L-220ENST00000587881 WDR62O43379 1518 aa20.25■□□□□ 0.83
NEDD4L-220ENST00000587881 RRP7BPQ9NSQ0 103 aa20.25■□□□□ 0.83
NEDD4L-220ENST00000587881 MYT1Q01538 1121 aa20.24■□□□□ 0.83
NEDD4L-220ENST00000587881 CHIC2Q9UKJ5 165 aa20.22■□□□□ 0.83
NEDD4L-220ENST00000587881 KDM5BQ9UGL1 1544 aa20.21■□□□□ 0.83
NEDD4L-220ENST00000587881 IFT140Q96RY7 1462 aa20.21■□□□□ 0.83
NEDD4L-220ENST00000587881 CDK13Q14004 1512 aaKnown RBP20.21■□□□□ 0.83
NEDD4L-220ENST00000587881 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
NEDD4L-220ENST00000587881 KIAA0586Q9BVV6 1533 aa20.17■□□□□ 0.82
NEDD4L-220ENST00000587881 DENND4BO75064 1496 aaPredicted RBP20.16■□□□□ 0.82
NEDD4L-220ENST00000587881 KDM6BO15054 1643 aa20.14■□□□□ 0.82
NEDD4L-220ENST00000587881 MPHOSPH9Q99550 1183 aa20.14■□□□□ 0.81
NEDD4L-220ENST00000587881 KIAA0556O60303 1618 aa20.13■□□□□ 0.81
NEDD4L-220ENST00000587881 ROCK1Q13464 1354 aa20.13■□□□□ 0.81
NEDD4L-220ENST00000587881 ZNF608Q9ULD9 1512 aaPredicted RBP20.13■□□□□ 0.81
NEDD4L-220ENST00000587881 DISP1Q96F81 1524 aa20.12■□□□□ 0.81
NEDD4L-220ENST00000587881 CDK11AQ9UQ88 783 aaPredicted RBP20.1■□□□□ 0.81
NEDD4L-220ENST00000587881 DAPK1P53355 1430 aa20.1■□□□□ 0.81
NEDD4L-220ENST00000587881 ARID3CA6NKF2 412 aa20.08■□□□□ 0.81
NEDD4L-220ENST00000587881 RAPGEF6Q8TEU7 1601 aa20.08■□□□□ 0.81
NEDD4L-220ENST00000587881 DNMT1P26358 1616 aaKnown RBP20.08■□□□□ 0.8
NEDD4L-220ENST00000587881 HSPA5P11021 654 aaKnown RBP20.08■□□□□ 0.8
NEDD4L-220ENST00000587881 FKBP8Q14318 412 aa20.07■□□□□ 0.8
NEDD4L-220ENST00000587881 NUP153P49790 1475 aaKnown RBP20.07■□□□□ 0.8
NEDD4L-220ENST00000587881 EIF4G2P78344 907 aaKnown RBP eCLIP20.06■□□□□ 0.8
NEDD4L-220ENST00000587881 GRIN2AQ12879 1464 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms