RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 RTL5Q5HYW3 569 aaPredicted RBP13.25□□□□□ -0.29
GPATCH8-205ENST00000587228 PPP1R15AO75807 674 aaPredicted RBP13.24□□□□□ -0.29
GPATCH8-205ENST00000587228 HNRNPUQ00839 825 aaKnown RBP eCLIP13.24□□□□□ -0.29
GPATCH8-205ENST00000587228 TMC1Q8TDI8 760 aa13.21□□□□□ -0.29
GPATCH8-205ENST00000587228 MYO15BQ96JP2 1530 aa13.21□□□□□ -0.29
GPATCH8-205ENST00000587228 C14orf37Q86TY3 774 aa13.18□□□□□ -0.3
GPATCH8-205ENST00000587228 A0A0G2JS52 829 aa13.16□□□□□ -0.3
GPATCH8-205ENST00000587228 TRHP20396 242 aaPredicted RBP13.16□□□□□ -0.3
GPATCH8-205ENST00000587228 CUX2O14529 1486 aa13.16□□□□□ -0.3
GPATCH8-205ENST00000587228 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
GPATCH8-205ENST00000587228 ZBTB7CA1YPR0 619 aa13.16□□□□□ -0.3
GPATCH8-205ENST00000587228 MRS2Q9HD23 443 aa13.14□□□□□ -0.31
GPATCH8-205ENST00000587228 CARMIL1Q5VZK9 1371 aa13.14□□□□□ -0.31
GPATCH8-205ENST00000587228 TNIKQ9UKE5 1360 aa13.14□□□□□ -0.31
GPATCH8-205ENST00000587228 EIF4G2P78344 907 aaKnown RBP eCLIP13.14□□□□□ -0.31
GPATCH8-205ENST00000587228 WDR43Q15061 677 aaKnown RBP eCLIP13.13□□□□□ -0.31
GPATCH8-205ENST00000587228 ACIN1Q9UKV3 1341 aaKnown RBP13.12□□□□□ -0.31
GPATCH8-205ENST00000587228 SOGA1O94964 1423 aa13.11□□□□□ -0.31
GPATCH8-205ENST00000587228 MROH2BQ7Z745 1585 aa13.11□□□□□ -0.31
GPATCH8-205ENST00000587228 FKBP8Q14318 412 aa13.11□□□□□ -0.31
GPATCH8-205ENST00000587228 EIF4G1Q04637 1599 aaKnown RBP13.1□□□□□ -0.31
GPATCH8-205ENST00000587228 TDRD9Q8NDG6 1382 aaKnown RBP13.1□□□□□ -0.31
GPATCH8-205ENST00000587228 MLECQ14165 292 aa13.09□□□□□ -0.31
GPATCH8-205ENST00000587228 NPM2Q86SE8 214 aaKnown RBP13.08□□□□□ -0.31
GPATCH8-205ENST00000587228 SENP3-EIF4A1A0A087X0R7 540 aa13.07□□□□□ -0.32
GPATCH8-205ENST00000587228 CCDC88BA6NC98 1476 aa13.06□□□□□ -0.32
GPATCH8-205ENST00000587228 CCNB3Q8WWL7 1395 aa13.06□□□□□ -0.32
GPATCH8-205ENST00000587228 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
GPATCH8-205ENST00000587228 SIN3AQ96ST3 1273 aa13.05□□□□□ -0.32
GPATCH8-205ENST00000587228 MIER1Q8N108 512 aa13.03□□□□□ -0.32
GPATCH8-205ENST00000587228 CARD11Q9BXL7 1154 aa13.03□□□□□ -0.32
GPATCH8-205ENST00000587228 PPM1GO15355 546 aaPredicted RBP13.03□□□□□ -0.32
GPATCH8-205ENST00000587228 HAP1P54257 671 aaPredicted RBP13.02□□□□□ -0.32
GPATCH8-205ENST00000587228 LMOD2Q6P5Q4 547 aa13.01□□□□□ -0.33
GPATCH8-205ENST00000587228 ABCC8Q09428 1581 aa13□□□□□ -0.33
GPATCH8-205ENST00000587228 FHAD1B1AJZ9 1412 aa13□□□□□ -0.33
GPATCH8-205ENST00000587228 SMARCA2P51531 1590 aa12.99□□□□□ -0.33
GPATCH8-205ENST00000587228 POGKQ9P215 609 aa12.99□□□□□ -0.33
GPATCH8-205ENST00000587228 ANP32AP39687 249 aaKnown RBP12.99□□□□□ -0.33
GPATCH8-205ENST00000587228 GGT6Q6P531 493 aa12.99□□□□□ -0.33
GPATCH8-205ENST00000587228 IRX6P78412 446 aaPredicted RBP12.97□□□□□ -0.33
GPATCH8-205ENST00000587228 CCDC136Q96JN2 1154 aa12.97□□□□□ -0.33
GPATCH8-205ENST00000587228 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.97□□□□□ -0.33
GPATCH8-205ENST00000587228 KNSTRNQ9Y448 316 aa12.97□□□□□ -0.33
GPATCH8-205ENST00000587228 HSP90AA1P07900 732 aaKnown RBP12.95□□□□□ -0.34
GPATCH8-205ENST00000587228 CDCA8Q53HL2 280 aa12.94□□□□□ -0.34
GPATCH8-205ENST00000587228 DCAF11Q8TEB1 546 aa12.94□□□□□ -0.34
GPATCH8-205ENST00000587228 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
GPATCH8-205ENST00000587228 TNNT2P45379 298 aaPredicted RBP12.93□□□□□ -0.34
GPATCH8-205ENST00000587228 KANK4Q5T7N3 995 aaPredicted RBP12.93□□□□□ -0.34
GPATCH8-205ENST00000587228 CARMIL2Q6F5E8 1435 aa12.93□□□□□ -0.34
GPATCH8-205ENST00000587228 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
GPATCH8-205ENST00000587228 CFAP53Q96M91 514 aa12.91□□□□□ -0.34
GPATCH8-205ENST00000587228 UPF2Q9HAU5 1272 aaKnown RBP12.91□□□□□ -0.34
GPATCH8-205ENST00000587228 SAFB2Q14151 953 aaKnown RBP eCLIP12.91□□□□□ -0.34
GPATCH8-205ENST00000587228 ARXQ96QS3 562 aa12.9□□□□□ -0.34
GPATCH8-205ENST00000587228 FOXD1Q16676 465 aa12.89□□□□□ -0.35
GPATCH8-205ENST00000587228 WIZO95785 1651 aa12.89□□□□□ -0.35
GPATCH8-205ENST00000587228 KANK1Q14678 1352 aa12.88□□□□□ -0.35
GPATCH8-205ENST00000587228 EFCAB2Q5VUJ9 269 aa12.87□□□□□ -0.35
GPATCH8-205ENST00000587228 SOX12O15370 315 aa12.87□□□□□ -0.35
GPATCH8-205ENST00000587228 PKD2Q13563 968 aa12.86□□□□□ -0.35
GPATCH8-205ENST00000587228 ATAD2BQ9ULI0 1458 aa12.86□□□□□ -0.35
GPATCH8-205ENST00000587228 CC2D1BQ5T0F9 858 aaKnown RBP12.85□□□□□ -0.35
GPATCH8-205ENST00000587228 JPH4Q96JJ6 628 aa12.85□□□□□ -0.35
GPATCH8-205ENST00000587228 VPS8Q8N3P4 1428 aa12.85□□□□□ -0.35
GPATCH8-205ENST00000587228 MYH16Q9H6N6 1097 aa12.85□□□□□ -0.35
GPATCH8-205ENST00000587228 STK26Q9P289 416 aa12.84□□□□□ -0.35
GPATCH8-205ENST00000587228 LAS1LQ9Y4W2 734 aaKnown RBP12.84□□□□□ -0.35
GPATCH8-205ENST00000587228 SRPK2P78362 688 aaKnown RBP12.83□□□□□ -0.36
GPATCH8-205ENST00000587228 U2SURPO15042 1029 aaKnown RBP12.82□□□□□ -0.36
GPATCH8-205ENST00000587228 HDGFP51858 240 aaKnown RBP12.82□□□□□ -0.36
GPATCH8-205ENST00000587228 TOP2AP11388 1531 aaKnown RBP12.82□□□□□ -0.36
GPATCH8-205ENST00000587228 ARHGAP35Q9NRY4 1499 aa12.81□□□□□ -0.36
GPATCH8-205ENST00000587228 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
GPATCH8-205ENST00000587228 KIF3BO15066 747 aa12.81□□□□□ -0.36
GPATCH8-205ENST00000587228 HNRNPMP52272 730 aaKnown RBP eCLIP12.81□□□□□ -0.361e-6■□□□□ 9.4
GPATCH8-205ENST00000587228 NUDCQ9Y266 331 aa12.81□□□□□ -0.36
GPATCH8-205ENST00000587228 FMN1Q68DA7 1419 aa12.8□□□□□ -0.36
GPATCH8-205ENST00000587228 FHOD3Q2V2M9 1422 aa12.8□□□□□ -0.36
GPATCH8-205ENST00000587228 TMF1P82094 1093 aa12.8□□□□□ -0.36
GPATCH8-205ENST00000587228 CYB5RLQ6IPT4 315 aa12.79□□□□□ -0.36
GPATCH8-205ENST00000587228 NUP155O75694 1391 aa12.78□□□□□ -0.36
GPATCH8-205ENST00000587228 SETD5Q9C0A6 1442 aa12.77□□□□□ -0.37
GPATCH8-205ENST00000587228 RAPGEF2Q9Y4G8 1499 aa12.75□□□□□ -0.37
GPATCH8-205ENST00000587228 FANCD2Q9BXW9 1451 aa12.75□□□□□ -0.37
GPATCH8-205ENST00000587228 MPHOSPH9Q99550 1183 aa12.75□□□□□ -0.37
GPATCH8-205ENST00000587228 NUTM2DQ5VT03 806 aaPredicted RBP12.73□□□□□ -0.37
GPATCH8-205ENST00000587228 FTSJ3Q8IY81 847 aaKnown RBP12.73□□□□□ -0.37
GPATCH8-205ENST00000587228 SPAG9O60271 1321 aaKnown RBP12.73□□□□□ -0.37
GPATCH8-205ENST00000587228 FRAT1Q92837 279 aaPredicted RBP12.73□□□□□ -0.37
GPATCH8-205ENST00000587228 SUPT16HQ9Y5B9 1047 aaKnown RBP12.73□□□□□ -0.37
GPATCH8-205ENST00000587228 ANKRD30AQ9BXX3 1397 aa12.72□□□□□ -0.37
GPATCH8-205ENST00000587228 SMARCA4P51532 1647 aa12.72□□□□□ -0.37
GPATCH8-205ENST00000587228 HSPA5P11021 654 aaKnown RBP12.71□□□□□ -0.37
GPATCH8-205ENST00000587228 MORC1Q86VD1 984 aa12.71□□□□□ -0.37
GPATCH8-205ENST00000587228 WASHC2CQ9Y4E1 1318 aa12.71□□□□□ -0.38
GPATCH8-205ENST00000587228 PAK3O75914 559 aaPredicted RBP12.7□□□□□ -0.38
GPATCH8-205ENST00000587228 RAB3GAP2Q9H2M9 1393 aa12.7□□□□□ -0.38
GPATCH8-205ENST00000587228 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms