RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 GRIN2AQ12879 1464 aa21.69■■□□□ 1.06
DNMT1-205ENST00000585920 CHD1O14646 1710 aa21.69■■□□□ 1.06
DNMT1-205ENST00000585920 CUL7Q14999 1698 aa21.67■■□□□ 1.06
DNMT1-205ENST00000585920 RAPGEF2Q9Y4G8 1499 aa21.61■■□□□ 1.05
DNMT1-205ENST00000585920 PRXQ9BXM0 1461 aa21.58■■□□□ 1.04
DNMT1-205ENST00000585920 NUP160Q12769 1436 aa21.57■■□□□ 1.04
DNMT1-205ENST00000585920 CEP170Q5SW79 1584 aa21.53■■□□□ 1.04
DNMT1-205ENST00000585920 EHMT2Q96KQ7 1210 aa21.51■■□□□ 1.03
DNMT1-205ENST00000585920 CLASP1Q7Z460 1538 aa21.5■■□□□ 1.03
DNMT1-205ENST00000585920 NCBP3Q53F19 620 aaKnown RBP21.48■■□□□ 1.03
DNMT1-205ENST00000585920 JPH4Q96JJ6 628 aa21.47■■□□□ 1.03
DNMT1-205ENST00000585920 KIAA0586Q9BVV6 1533 aa21.46■■□□□ 1.03
DNMT1-205ENST00000585920 UBTFP17480 764 aaKnown RBP21.4■■□□□ 1.02
DNMT1-205ENST00000585920 KIF21BO75037 1637 aa21.39■■□□□ 1.01
DNMT1-205ENST00000585920 MSH5O43196 834 aa21.38■■□□□ 1.01
DNMT1-205ENST00000585920 ARHGEF11O15085 1522 aa21.36■■□□□ 1.01
DNMT1-205ENST00000585920 PRG4Q92954 1404 aaPredicted RBP21.36■■□□□ 1.01
DNMT1-205ENST00000585920 GOLGA3Q08378 1498 aa21.35■■□□□ 1.01
DNMT1-205ENST00000585920 IQGAP2Q13576 1575 aa21.33■■□□□ 1.01
DNMT1-205ENST00000585920 SHROOM2Q13796 1616 aa21.31■■□□□ 1
DNMT1-205ENST00000585920 RIMBP3CA6NJZ7 1639 aa21.3■■□□□ 1
DNMT1-205ENST00000585920 RIMBP3BA6NNM3 1639 aa21.3■■□□□ 1
DNMT1-205ENST00000585920 RIMBP3Q9UFD9 1639 aa21.3■■□□□ 1
DNMT1-205ENST00000585920 CYB5RLQ6IPT4 315 aa21.29■■□□□ 1
DNMT1-205ENST00000585920 CARMIL2Q6F5E8 1435 aa21.28■■□□□ 1
DNMT1-205ENST00000585920 RANGAP1P46060 587 aaPredicted RBP21.27■■□□□ 1
DNMT1-205ENST00000585920 SLC4A1APQ9BWU0 796 aaKnown RBP21.27■■□□□ 1
DNMT1-205ENST00000585920 CTTNBP2Q8WZ74 1663 aa21.26■□□□□ 0.99
DNMT1-205ENST00000585920 NPM3O75607 178 aaKnown RBP21.26■□□□□ 0.99
DNMT1-205ENST00000585920 ERCC6L2Q5T890 1561 aa21.24■□□□□ 0.99
DNMT1-205ENST00000585920 UGGT2Q9NYU1 1516 aa21.24■□□□□ 0.99
DNMT1-205ENST00000585920 TTBK1Q5TCY1 1321 aaPredicted RBP21.21■□□□□ 0.99
DNMT1-205ENST00000585920 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
DNMT1-205ENST00000585920 LOC105371045A0A1W2PR82 267 aa21.2■□□□□ 0.98
DNMT1-205ENST00000585920 P3H3Q8IVL6 736 aa21.18■□□□□ 0.98
DNMT1-205ENST00000585920 TNIKQ9UKE5 1360 aa21.18■□□□□ 0.98
DNMT1-205ENST00000585920 DISP1Q96F81 1524 aa21.18■□□□□ 0.98
DNMT1-205ENST00000585920 SCAF1Q9H7N4 1312 aaKnown RBP21.17■□□□□ 0.98
DNMT1-205ENST00000585920 PTPRGP23470 1445 aa21.16■□□□□ 0.98
DNMT1-205ENST00000585920 CNKSR2Q8WXI2 1034 aa21.12■□□□□ 0.97
DNMT1-205ENST00000585920 KIAA0556O60303 1618 aa21.11■□□□□ 0.97
DNMT1-205ENST00000585920 EFCAB5A4FU69 1503 aa21.04■□□□□ 0.96
DNMT1-205ENST00000585920 SAMD9Q5K651 1589 aa21.04■□□□□ 0.96
DNMT1-205ENST00000585920 FHOD3Q2V2M9 1422 aa21.02■□□□□ 0.96
DNMT1-205ENST00000585920 NPM1P06748 294 aaKnown RBP eCLIP21.01■□□□□ 0.95
DNMT1-205ENST00000585920 CLIP1P30622 1438 aa21■□□□□ 0.95
DNMT1-205ENST00000585920 ARHGAP35Q9NRY4 1499 aa21■□□□□ 0.95
DNMT1-205ENST00000585920 UACAQ9BZF9 1416 aa20.99■□□□□ 0.95
DNMT1-205ENST00000585920 MAPK8IP2Q13387 824 aaPredicted RBP20.97■□□□□ 0.95
DNMT1-205ENST00000585920 CEP162Q5TB80 1403 aa20.95■□□□□ 0.94
DNMT1-205ENST00000585920 PLB1Q6P1J6 1458 aa20.94■□□□□ 0.94
DNMT1-205ENST00000585920 UHRF1BP1LA0JNW5 1464 aa20.92■□□□□ 0.94
DNMT1-205ENST00000585920 FMN1Q68DA7 1419 aa20.9■□□□□ 0.94
DNMT1-205ENST00000585920 ABCC2Q92887 1545 aa20.89■□□□□ 0.94
DNMT1-205ENST00000585920 ATP1B4Q9UN42 357 aaPredicted RBP20.89■□□□□ 0.93
DNMT1-205ENST00000585920 ADCY10Q96PN6 1610 aa20.89■□□□□ 0.93
DNMT1-205ENST00000585920 ABCA8O94911 1581 aa20.88■□□□□ 0.93
DNMT1-205ENST00000585920 ARID3CA6NKF2 412 aa20.86■□□□□ 0.93
DNMT1-205ENST00000585920 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.83■□□□□ 0.93
DNMT1-205ENST00000585920 HNRNPUL2Q1KMD3 747 aaKnown RBP20.83■□□□□ 0.93
DNMT1-205ENST00000585920 RAPGEF6Q8TEU7 1601 aa20.82■□□□□ 0.92
DNMT1-205ENST00000585920 KDM5BQ9UGL1 1544 aa20.81■□□□□ 0.92
DNMT1-205ENST00000585920 TRHP20396 242 aaPredicted RBP20.79■□□□□ 0.92
DNMT1-205ENST00000585920 ATP10BO94823 1461 aa20.77■□□□□ 0.92
DNMT1-205ENST00000585920 NUP153P49790 1475 aaKnown RBP20.77■□□□□ 0.92
DNMT1-205ENST00000585920 CASKIN1Q8WXD9 1431 aa20.75■□□□□ 0.91
DNMT1-205ENST00000585920 ASXL2Q76L83 1435 aa20.74■□□□□ 0.91
DNMT1-205ENST00000585920 MAPKBP1O60336 1514 aa20.73■□□□□ 0.91
DNMT1-205ENST00000585920 ZCCHC11Q5TAX3 1644 aaKnown RBP20.72■□□□□ 0.91
DNMT1-205ENST00000585920 PLEKHD1A6NEE1 506 aa20.71■□□□□ 0.91
DNMT1-205ENST00000585920 HECW1Q76N89 1606 aa20.7■□□□□ 0.9
DNMT1-205ENST00000585920 FAM69CQ0P6D2 419 aa20.69■□□□□ 0.9
DNMT1-205ENST00000585920 KCNH8Q96L42 1107 aa20.69■□□□□ 0.9
DNMT1-205ENST00000585920 CDK11AQ9UQ88 783 aaPredicted RBP20.69■□□□□ 0.9
DNMT1-205ENST00000585920 FYCO1Q9BQS8 1478 aa20.69■□□□□ 0.9
DNMT1-205ENST00000585920 VPS8Q8N3P4 1428 aa20.68■□□□□ 0.9
DNMT1-205ENST00000585920 EPRSP07814 1512 aaKnown RBP20.68■□□□□ 0.9
DNMT1-205ENST00000585920 PCF11O94913 1555 aaKnown RBP20.67■□□□□ 0.9
DNMT1-205ENST00000585920 CDK13Q14004 1512 aaKnown RBP20.65■□□□□ 0.9
DNMT1-205ENST00000585920 WDR7Q9Y4E6 1490 aa20.65■□□□□ 0.9
DNMT1-205ENST00000585920 ABCC10Q5T3U5 1492 aa20.64■□□□□ 0.89
DNMT1-205ENST00000585920 CCDC18Q5T9S5 1454 aa20.63■□□□□ 0.89
DNMT1-205ENST00000585920 APLP2Q06481 763 aa20.59■□□□□ 0.89
DNMT1-205ENST00000585920 DIP2BQ9P265 1576 aa20.56■□□□□ 0.88
DNMT1-205ENST00000585920 POTEDQ86YR6 584 aa20.55■□□□□ 0.88
DNMT1-205ENST00000585920 ZBTB22O15209 634 aa20.53■□□□□ 0.88
DNMT1-205ENST00000585920 RNF216Q9NWF9 866 aaPredicted RBP20.53■□□□□ 0.88
DNMT1-205ENST00000585920 TROQ12816 1431 aaPredicted RBP20.53■□□□□ 0.88
DNMT1-205ENST00000585920 GLI2P10070 1586 aa20.52■□□□□ 0.88
DNMT1-205ENST00000585920 LRRIQ1Q96JM4 1722 aa20.52■□□□□ 0.88
DNMT1-205ENST00000585920 MTUS2Q5JR59 1369 aa20.5■□□□□ 0.87
DNMT1-205ENST00000585920 CD109Q6YHK3 1445 aa20.48■□□□□ 0.87
DNMT1-205ENST00000585920 KIF13AQ9H1H9 1805 aa20.48■□□□□ 0.87
DNMT1-205ENST00000585920 MAP3K1Q13233 1512 aa20.44■□□□□ 0.86
DNMT1-205ENST00000585920 MAGI3Q5TCQ9 1506 aa20.44■□□□□ 0.86
DNMT1-205ENST00000585920 TIAM1Q13009 1591 aa20.44■□□□□ 0.86
DNMT1-205ENST00000585920 DMRT2Q9Y5R5 561 aa20.44■□□□□ 0.86
DNMT1-205ENST00000585920 KANK4Q5T7N3 995 aaPredicted RBP20.43■□□□□ 0.86
DNMT1-205ENST00000585920 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.41■□□□□ 0.86
DNMT1-205ENST00000585920 ABCA9Q8IUA7 1624 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms