RNA–Protein interactions for RNA: ENST00000581671.1

CTC1-208, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-208ENST00000581671 NPM1P06748 294 aaKnown RBP eCLIP18.19■□□□□ 0.5
CTC1-208ENST00000581671 NUP160Q12769 1436 aa18.19■□□□□ 0.5
CTC1-208ENST00000581671 ILDR2Q71H61 639 aa18.16■□□□□ 0.5
CTC1-208ENST00000581671 PRG4Q92954 1404 aaPredicted RBP18.11■□□□□ 0.49
CTC1-208ENST00000581671 CUX1P39880 1505 aa18.11■□□□□ 0.49
CTC1-208ENST00000581671 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
CTC1-208ENST00000581671 ADCY10Q96PN6 1610 aa18.06■□□□□ 0.48
CTC1-208ENST00000581671 ADAMTS12P58397 1594 aa18.04■□□□□ 0.48
CTC1-208ENST00000581671 ABCA10Q8WWZ4 1543 aa18.02■□□□□ 0.47
CTC1-208ENST00000581671 JPH4Q96JJ6 628 aa18.01■□□□□ 0.47
CTC1-208ENST00000581671 DISP3Q9P2K9 1392 aa18.01■□□□□ 0.47
CTC1-208ENST00000581671 COL17A1Q9UMD9 1497 aaPredicted RBP17.98■□□□□ 0.47
CTC1-208ENST00000581671 PPRC1Q5VV67 1664 aaKnown RBP17.98■□□□□ 0.47
CTC1-208ENST00000581671 FHAD1B1AJZ9 1412 aa17.94■□□□□ 0.46
CTC1-208ENST00000581671 TOP2BQ02880 1626 aa17.93■□□□□ 0.46
CTC1-208ENST00000581671 GLI2P10070 1586 aa17.86■□□□□ 0.45
CTC1-208ENST00000581671 RUSC2Q8N2Y8 1516 aa17.82■□□□□ 0.44
CTC1-208ENST00000581671 ASXL2Q76L83 1435 aa17.79■□□□□ 0.44
CTC1-208ENST00000581671 PLB1Q6P1J6 1458 aa17.77■□□□□ 0.44
CTC1-208ENST00000581671 ERICH3Q5RHP9 1530 aa17.76■□□□□ 0.43
CTC1-208ENST00000581671 CERKQ8TCT0 537 aa17.75■□□□□ 0.43
CTC1-208ENST00000581671 TEX14Q8IWB6 1497 aa17.74■□□□□ 0.43
CTC1-208ENST00000581671 SPATA31D1Q6ZQQ2 1576 aa17.74■□□□□ 0.43
CTC1-208ENST00000581671 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
CTC1-208ENST00000581671 ABCC2Q92887 1545 aa17.72■□□□□ 0.43
CTC1-208ENST00000581671 MAP3K4Q9Y6R4 1608 aa17.72■□□□□ 0.43
CTC1-208ENST00000581671 PCF11O94913 1555 aaKnown RBP17.69■□□□□ 0.42
CTC1-208ENST00000581671 PTPRMP28827 1452 aa17.69■□□□□ 0.42
CTC1-208ENST00000581671 KIF21BO75037 1637 aa17.68■□□□□ 0.42
CTC1-208ENST00000581671 PTPRGP23470 1445 aa17.67■□□□□ 0.42
CTC1-208ENST00000581671 EPRSP07814 1512 aaKnown RBP17.67■□□□□ 0.42
CTC1-208ENST00000581671 CUL7Q14999 1698 aa17.66■□□□□ 0.42
CTC1-208ENST00000581671 TTBK1Q5TCY1 1321 aaPredicted RBP17.65■□□□□ 0.42
CTC1-208ENST00000581671 KIAA0586Q9BVV6 1533 aa17.61■□□□□ 0.41
CTC1-208ENST00000581671 ADAMTSL3P82987 1691 aa17.6■□□□□ 0.41
CTC1-208ENST00000581671 HSPA2P54652 639 aa17.56■□□□□ 0.4
CTC1-208ENST00000581671 UHRF1BP1LA0JNW5 1464 aa17.55■□□□□ 0.4
CTC1-208ENST00000581671 TNIKQ9UKE5 1360 aa17.53■□□□□ 0.4
CTC1-208ENST00000581671 BIVM-ERCC5R4GMW8 1640 aa17.5■□□□□ 0.39
CTC1-208ENST00000581671 KDM5BQ9UGL1 1544 aa17.5■□□□□ 0.39
CTC1-208ENST00000581671 UACAQ9BZF9 1416 aa17.49■□□□□ 0.39
CTC1-208ENST00000581671 MADDQ8WXG6 1647 aa17.47■□□□□ 0.39
CTC1-208ENST00000581671 MAGI3Q5TCQ9 1506 aa17.47■□□□□ 0.39
CTC1-208ENST00000581671 ZCCHC11Q5TAX3 1644 aaKnown RBP17.45■□□□□ 0.38
CTC1-208ENST00000581671 CARMIL2Q6F5E8 1435 aa17.45■□□□□ 0.38
CTC1-208ENST00000581671 CD109Q6YHK3 1445 aa17.44■□□□□ 0.38
CTC1-208ENST00000581671 BCORL1Q5H9F3 1711 aa17.43■□□□□ 0.38
CTC1-208ENST00000581671 WDR7Q9Y4E6 1490 aa17.42■□□□□ 0.38
CTC1-208ENST00000581671 CFAP43Q8NDM7 1665 aa17.4■□□□□ 0.38
CTC1-208ENST00000581671 ARAP3Q8WWN8 1544 aa17.37■□□□□ 0.37
CTC1-208ENST00000581671 RIMS1Q86UR5 1692 aaKnown RBP17.37■□□□□ 0.37
CTC1-208ENST00000581671 ARID4BQ4LE39 1312 aaPredicted RBP17.35■□□□□ 0.37
CTC1-208ENST00000581671 PLPPR3Q6T4P5 718 aa17.33■□□□□ 0.36
CTC1-208ENST00000581671 KCNH8Q96L42 1107 aa17.32■□□□□ 0.36
CTC1-208ENST00000581671 IGF1RP08069 1367 aa17.29■□□□□ 0.36
CTC1-208ENST00000581671 DISP1Q96F81 1524 aa17.29■□□□□ 0.36
CTC1-208ENST00000581671 RAPGEF3O95398 923 aa17.26■□□□□ 0.35
CTC1-208ENST00000581671 IQGAP2Q13576 1575 aa17.26■□□□□ 0.35
CTC1-208ENST00000581671 DMRT2Q9Y5R5 561 aa17.24■□□□□ 0.35
CTC1-208ENST00000581671 YEATS2Q9ULM3 1422 aa17.23■□□□□ 0.35
CTC1-208ENST00000581671 STRCQ7RTU9 1775 aa17.22■□□□□ 0.35
CTC1-208ENST00000581671 PHLDB1Q86UU1 1377 aa17.19■□□□□ 0.34
CTC1-208ENST00000581671 FRMPD1Q5SYB0 1578 aa17.16■□□□□ 0.34
CTC1-208ENST00000581671 LTBP4Q8N2S1 1624 aa17.15■□□□□ 0.34
CTC1-208ENST00000581671 IQSEC2Q5JU85 1478 aa17.15■□□□□ 0.34
CTC1-208ENST00000581671 CARMIL1Q5VZK9 1371 aa17.14■□□□□ 0.33
CTC1-208ENST00000581671 PREX1Q8TCU6 1659 aa17.13■□□□□ 0.33
CTC1-208ENST00000581671 KIAA0556O60303 1618 aa17.13■□□□□ 0.33
CTC1-208ENST00000581671 KIF27Q86VH2 1401 aa17.13■□□□□ 0.33
CTC1-208ENST00000581671 ARHGEF40Q8TER5 1519 aa17.12■□□□□ 0.33
CTC1-208ENST00000581671 UGGT2Q9NYU1 1516 aa17.12■□□□□ 0.33
CTC1-208ENST00000581671 POGZQ7Z3K3 1410 aa17.11■□□□□ 0.33
CTC1-208ENST00000581671 PTPRTO14522 1441 aa17.1■□□□□ 0.33
CTC1-208ENST00000581671 TTC37Q6PGP7 1564 aa17.1■□□□□ 0.33
CTC1-208ENST00000581671 NEO1Q92859 1461 aa17.09■□□□□ 0.33
CTC1-208ENST00000581671 MED1Q15648 1581 aaPredicted RBP17.09■□□□□ 0.33
CTC1-208ENST00000581671 FER1L4A9Z1Z3 1794 aa17.09■□□□□ 0.33
CTC1-208ENST00000581671 FANCAO15360 1455 aa17.08■□□□□ 0.32
CTC1-208ENST00000581671 SIGLEC1Q9BZZ2 1709 aa17.07■□□□□ 0.32
CTC1-208ENST00000581671 MLECQ14165 292 aa17.06■□□□□ 0.32
CTC1-208ENST00000581671 ABCA9Q8IUA7 1624 aa17.06■□□□□ 0.32
CTC1-208ENST00000581671 ABCA8O94911 1581 aa17.05■□□□□ 0.32
CTC1-208ENST00000581671 UBAP1LF5GYI3 381 aa17.04■□□□□ 0.32
CTC1-208ENST00000581671 CEBPAP49715 358 aaPredicted RBP17.01■□□□□ 0.31
CTC1-208ENST00000581671 AKNAQ7Z591 1439 aa17.01■□□□□ 0.31
CTC1-208ENST00000581671 SETD1BQ9UPS6 1966 aaKnown RBP17■□□□□ 0.31
CTC1-208ENST00000581671 RICTORQ6R327 1708 aa16.99■□□□□ 0.31
CTC1-208ENST00000581671 UHRF1BP1Q6BDS2 1440 aa16.99■□□□□ 0.31
CTC1-208ENST00000581671 DENND4BO75064 1496 aaPredicted RBP16.97■□□□□ 0.31
CTC1-208ENST00000581671 ARID3CA6NKF2 412 aa16.96■□□□□ 0.31
CTC1-208ENST00000581671 PHF23Q9BUL5 403 aaPredicted RBP16.96■□□□□ 0.31
CTC1-208ENST00000581671 ARHGEF12Q9NZN5 1544 aa16.95■□□□□ 0.3
CTC1-208ENST00000581671 FHOD3Q2V2M9 1422 aa16.95■□□□□ 0.3
CTC1-208ENST00000581671 HSPA1LP34931 641 aa16.94■□□□□ 0.3
CTC1-208ENST00000581671 CHIC1Q5VXU3 224 aa16.94■□□□□ 0.3
CTC1-208ENST00000581671 ZFYVE16Q7Z3T8 1539 aa16.93■□□□□ 0.3
CTC1-208ENST00000581671 ATP10BO94823 1461 aa16.92■□□□□ 0.3
CTC1-208ENST00000581671 EFCAB5A4FU69 1503 aa16.91■□□□□ 0.3
CTC1-208ENST00000581671 ZMYM4Q5VZL5 1548 aa16.91■□□□□ 0.3
CTC1-208ENST00000581671 ZNF335Q9H4Z2 1342 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms