RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 GRIN2BQ13224 1484 aa14.74□□□□□ -0.05
SMARCE1-217ENST00000580654 FGD5Q6ZNL6 1462 aa14.74□□□□□ -0.05
SMARCE1-217ENST00000580654 KIF13AQ9H1H9 1805 aa14.73□□□□□ -0.05
SMARCE1-217ENST00000580654 PBRM1Q86U86 1689 aa14.71□□□□□ -0.05
SMARCE1-217ENST00000580654 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
SMARCE1-217ENST00000580654 CUX1P39880 1505 aa14.67□□□□□ -0.06
SMARCE1-217ENST00000580654 CNKSR2Q8WXI2 1034 aa14.67□□□□□ -0.06
SMARCE1-217ENST00000580654 CEP170Q5SW79 1584 aa14.63□□□□□ -0.07
SMARCE1-217ENST00000580654 ABCA5Q8WWZ7 1642 aa14.6□□□□□ -0.07
SMARCE1-217ENST00000580654 KDM4FA0A1W2PPD8 638 aa14.6□□□□□ -0.07
SMARCE1-217ENST00000580654 SHROOM2Q13796 1616 aa14.59□□□□□ -0.07
SMARCE1-217ENST00000580654 GRIN2AQ12879 1464 aa14.57□□□□□ -0.08
SMARCE1-217ENST00000580654 NUP160Q12769 1436 aa14.56□□□□□ -0.08
SMARCE1-217ENST00000580654 ABCA10Q8WWZ4 1543 aa14.54□□□□□ -0.08
SMARCE1-217ENST00000580654 ADAMTS12P58397 1594 aa14.52□□□□□ -0.08
SMARCE1-217ENST00000580654 ABCC10Q5T3U5 1492 aa14.5□□□□□ -0.09
SMARCE1-217ENST00000580654 DIP2BQ9P265 1576 aa14.49□□□□□ -0.09
SMARCE1-217ENST00000580654 KDM6BO15054 1643 aa14.48□□□□□ -0.09
SMARCE1-217ENST00000580654 FAM69CQ0P6D2 419 aa14.47□□□□□ -0.09
SMARCE1-217ENST00000580654 MAPKBP1O60336 1514 aa14.45□□□□□ -0.1
SMARCE1-217ENST00000580654 PRG4Q92954 1404 aaPredicted RBP14.42□□□□□ -0.1
SMARCE1-217ENST00000580654 TSPOAP1O95153 1857 aa14.42□□□□□ -0.1
SMARCE1-217ENST00000580654 FHAD1B1AJZ9 1412 aa14.41□□□□□ -0.1
SMARCE1-217ENST00000580654 ADCY10Q96PN6 1610 aa14.4□□□□□ -0.1
SMARCE1-217ENST00000580654 JPH4Q96JJ6 628 aa14.35□□□□□ -0.11
SMARCE1-217ENST00000580654 RUSC2Q8N2Y8 1516 aa14.34□□□□□ -0.11
SMARCE1-217ENST00000580654 HECW2Q9P2P5 1572 aa14.34□□□□□ -0.11
SMARCE1-217ENST00000580654 ADGRL1O94910 1474 aa14.33□□□□□ -0.12
SMARCE1-217ENST00000580654 ERICH3Q5RHP9 1530 aa14.33□□□□□ -0.12
SMARCE1-217ENST00000580654 NPM1P06748 294 aaKnown RBP eCLIP14.32□□□□□ -0.12
SMARCE1-217ENST00000580654 WRNQ14191 1432 aaPredicted RBP eCLIP14.32□□□□□ -0.12
SMARCE1-217ENST00000580654 PPRC1Q5VV67 1664 aaKnown RBP14.3□□□□□ -0.12
SMARCE1-217ENST00000580654 POTEHQ6S545 545 aa14.3□□□□□ -0.12
SMARCE1-217ENST00000580654 BIVM-ERCC5R4GMW8 1640 aa14.3□□□□□ -0.12
SMARCE1-217ENST00000580654 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
SMARCE1-217ENST00000580654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.138e-9■■□□□ 11.5
SMARCE1-217ENST00000580654 COL17A1Q9UMD9 1497 aaPredicted RBP14.22□□□□□ -0.13
SMARCE1-217ENST00000580654 FBXO41Q8TF61 875 aa14.21□□□□□ -0.13
SMARCE1-217ENST00000580654 GLI2P10070 1586 aa14.2□□□□□ -0.14
SMARCE1-217ENST00000580654 KIAA0586Q9BVV6 1533 aa14.15□□□□□ -0.14
SMARCE1-217ENST00000580654 ABCC2Q92887 1545 aa14.14□□□□□ -0.15
SMARCE1-217ENST00000580654 ASXL2Q76L83 1435 aa14.14□□□□□ -0.15
SMARCE1-217ENST00000580654 CUL7Q14999 1698 aa14.14□□□□□ -0.15
SMARCE1-217ENST00000580654 MAP3K4Q9Y6R4 1608 aa14.12□□□□□ -0.15
SMARCE1-217ENST00000580654 PLB1Q6P1J6 1458 aa14.11□□□□□ -0.15
SMARCE1-217ENST00000580654 PTPRGP23470 1445 aa14.1□□□□□ -0.15
SMARCE1-217ENST00000580654 EPRSP07814 1512 aaKnown RBP14.07□□□□□ -0.16
SMARCE1-217ENST00000580654 NCBP3Q53F19 620 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-217ENST00000580654 UHRF1BP1LA0JNW5 1464 aa14.06□□□□□ -0.16
SMARCE1-217ENST00000580654 LMTK3Q96Q04 1460 aa14.06□□□□□ -0.16
SMARCE1-217ENST00000580654 TTBK1Q5TCY1 1321 aaPredicted RBP14.05□□□□□ -0.16
SMARCE1-217ENST00000580654 TNIKQ9UKE5 1360 aa14.04□□□□□ -0.16
SMARCE1-217ENST00000580654 TEX14Q8IWB6 1497 aa14.04□□□□□ -0.16
SMARCE1-217ENST00000580654 IGF1RP08069 1367 aa14.02□□□□□ -0.17
SMARCE1-217ENST00000580654 KDM5BQ9UGL1 1544 aa14□□□□□ -0.17
SMARCE1-217ENST00000580654 ZCCHC11Q5TAX3 1644 aaKnown RBP14□□□□□ -0.17
SMARCE1-217ENST00000580654 UACAQ9BZF9 1416 aa13.99□□□□□ -0.17
SMARCE1-217ENST00000580654 KIF21BO75037 1637 aa13.99□□□□□ -0.17
SMARCE1-217ENST00000580654 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
SMARCE1-217ENST00000580654 DISP1Q96F81 1524 aa13.95□□□□□ -0.18
SMARCE1-217ENST00000580654 IQGAP2Q13576 1575 aa13.95□□□□□ -0.18
SMARCE1-217ENST00000580654 SOCS7O14512 581 aa13.94□□□□□ -0.18
SMARCE1-217ENST00000580654 DSG3P32926 999 aa13.94□□□□□ -0.18
SMARCE1-217ENST00000580654 ADAMTSL3P82987 1691 aa13.91□□□□□ -0.18
SMARCE1-217ENST00000580654 CFAP43Q8NDM7 1665 aa13.91□□□□□ -0.18
SMARCE1-217ENST00000580654 KIF27Q86VH2 1401 aa13.9□□□□□ -0.18
SMARCE1-217ENST00000580654 MAGI3Q5TCQ9 1506 aa13.9□□□□□ -0.18
SMARCE1-217ENST00000580654 PTPRMP28827 1452 aa13.9□□□□□ -0.18
SMARCE1-217ENST00000580654 WDR7Q9Y4E6 1490 aa13.9□□□□□ -0.18
SMARCE1-217ENST00000580654 U3KPZ7 1027 aaPredicted RBP13.89□□□□□ -0.19
SMARCE1-217ENST00000580654 CARMIL1Q5VZK9 1371 aa13.88□□□□□ -0.19
SMARCE1-217ENST00000580654 SUPT5HO00267 1087 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-217ENST00000580654 CD109Q6YHK3 1445 aa13.87□□□□□ -0.19
SMARCE1-217ENST00000580654 CAPN15O75808 1086 aa13.86□□□□□ -0.19
SMARCE1-217ENST00000580654 PCF11O94913 1555 aaKnown RBP13.86□□□□□ -0.19
SMARCE1-217ENST00000580654 KIAA0556O60303 1618 aa13.86□□□□□ -0.19
SMARCE1-217ENST00000580654 UGGT2Q9NYU1 1516 aa13.85□□□□□ -0.19
SMARCE1-217ENST00000580654 ILDR2Q71H61 639 aa13.85□□□□□ -0.19
SMARCE1-217ENST00000580654 SPINK5Q9NQ38 1064 aaPredicted RBP13.85□□□□□ -0.19
SMARCE1-217ENST00000580654 ARAP3Q8WWN8 1544 aa13.82□□□□□ -0.2
SMARCE1-217ENST00000580654 NPM3O75607 178 aaKnown RBP13.82□□□□□ -0.2
SMARCE1-217ENST00000580654 BCORL1Q5H9F3 1711 aa13.81□□□□□ -0.2
SMARCE1-217ENST00000580654 MADDQ8WXG6 1647 aa13.81□□□□□ -0.2
SMARCE1-217ENST00000580654 DISP3Q9P2K9 1392 aa13.8□□□□□ -0.2
SMARCE1-217ENST00000580654 KCNH8Q96L42 1107 aa13.78□□□□□ -0.2
SMARCE1-217ENST00000580654 ABCA8O94911 1581 aa13.77□□□□□ -0.21
SMARCE1-217ENST00000580654 CERKQ8TCT0 537 aa13.75□□□□□ -0.21
SMARCE1-217ENST00000580654 RIMS1Q86UR5 1692 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-217ENST00000580654 HSPA2P54652 639 aa13.73□□□□□ -0.21
SMARCE1-217ENST00000580654 FRMPD1Q5SYB0 1578 aa13.73□□□□□ -0.21
SMARCE1-217ENST00000580654 RAPGEF2Q9Y4G8 1499 aa13.7□□□□□ -0.22
SMARCE1-217ENST00000580654 RAPGEF3O95398 923 aa13.7□□□□□ -0.22
SMARCE1-217ENST00000580654 ABCA9Q8IUA7 1624 aa13.7□□□□□ -0.22
SMARCE1-217ENST00000580654 SPATA31D1Q6ZQQ2 1576 aa13.68□□□□□ -0.22
SMARCE1-217ENST00000580654 CTTNBP2Q8WZ74 1663 aa13.68□□□□□ -0.22
SMARCE1-217ENST00000580654 PHLDB1Q86UU1 1377 aa13.67□□□□□ -0.22
SMARCE1-217ENST00000580654 SIGLEC1Q9BZZ2 1709 aa13.66□□□□□ -0.22
SMARCE1-217ENST00000580654 ARHGEF40Q8TER5 1519 aa13.65□□□□□ -0.22
SMARCE1-217ENST00000580654 ARID4BQ4LE39 1312 aaPredicted RBP13.64□□□□□ -0.23
SMARCE1-217ENST00000580654 NEO1Q92859 1461 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms