RNA–Protein interactions for RNA: ENST00000578648.5

MSL1-204, Transcript of male specific lethal 1 homolog, humanhuman

TSL 5 BASIC

Gene MSL1, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-204ENST00000578648 LRRC9Q6ZRR7 1453 aa30.8■■■□□ 2.52
MSL1-204ENST00000578648 LAMC3Q9Y6N6 1575 aa30.76■■■□□ 2.52
MSL1-204ENST00000578648 MAPKBP1O60336 1514 aa30.76■■■□□ 2.51
MSL1-204ENST00000578648 PHLDB1Q86UU1 1377 aa30.75■■■□□ 2.51
MSL1-204ENST00000578648 TOPBP1Q92547 1522 aa30.72■■■□□ 2.51
MSL1-204ENST00000578648 P3H3Q8IVL6 736 aa30.7■■■□□ 2.51
MSL1-204ENST00000578648 SETD5Q9C0A6 1442 aa30.7■■■□□ 2.5
MSL1-204ENST00000578648 FHAD1B1AJZ9 1412 aa30.69■■■□□ 2.5
MSL1-204ENST00000578648 PCF11O94913 1555 aaKnown RBP30.66■■■□□ 2.5
MSL1-204ENST00000578648 CFAP43Q8NDM7 1665 aa30.66■■■□□ 2.5
MSL1-204ENST00000578648 POLA1P09884 1462 aaPredicted RBP30.65■■■□□ 2.5
MSL1-204ENST00000578648 RAD54L2Q9Y4B4 1467 aa30.65■■■□□ 2.5
MSL1-204ENST00000578648 ABCA10Q8WWZ4 1543 aa30.64■■■□□ 2.5
MSL1-204ENST00000578648 FAM50AQ14320 339 aaKnown RBP30.61■■■□□ 2.49
MSL1-204ENST00000578648 FHOD3Q2V2M9 1422 aa30.59■■■□□ 2.49
MSL1-204ENST00000578648 ATP1B4Q9UN42 357 aaPredicted RBP30.57■■■□□ 2.48
MSL1-204ENST00000578648 URB2Q14146 1524 aaKnown RBP30.54■■■□□ 2.48
MSL1-204ENST00000578648 SIN3AQ96ST3 1273 aa30.53■■■□□ 2.48
MSL1-204ENST00000578648 PDS5BQ9NTI5 1447 aa30.52■■■□□ 2.48
MSL1-204ENST00000578648 DNAJC5BQ9UF47 199 aa30.52■■■□□ 2.48
MSL1-204ENST00000578648 FYCO1Q9BQS8 1478 aa30.49■■■□□ 2.47
MSL1-204ENST00000578648 EFCAB5A4FU69 1503 aa30.48■■■□□ 2.47
MSL1-204ENST00000578648 CASKIN1Q8WXD9 1431 aa30.48■■■□□ 2.47
MSL1-204ENST00000578648 WDR97A6NE52 1622 aa30.47■■■□□ 2.47
MSL1-204ENST00000578648 AQRO60306 1485 aaKnown RBP eCLIP30.44■■■□□ 2.467e-9■■■■□ 25.6
MSL1-204ENST00000578648 CUL7Q14999 1698 aa30.44■■■□□ 2.46
MSL1-204ENST00000578648 CTTNBP2Q8WZ74 1663 aa30.42■■■□□ 2.46
MSL1-204ENST00000578648 KIF21AQ7Z4S6 1674 aa30.41■■■□□ 2.46
MSL1-204ENST00000578648 KCNH8Q96L42 1107 aa30.41■■■□□ 2.46
MSL1-204ENST00000578648 SUPT16HQ9Y5B9 1047 aaKnown RBP30.4■■■□□ 2.46
MSL1-204ENST00000578648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.39■■■□□ 2.45
MSL1-204ENST00000578648 TIMELESSQ9UNS1 1208 aa30.32■■■□□ 2.44
MSL1-204ENST00000578648 ABCA5Q8WWZ7 1642 aa30.32■■■□□ 2.44
MSL1-204ENST00000578648 SNAPC4Q5SXM2 1469 aa30.31■■■□□ 2.44
MSL1-204ENST00000578648 FMN1Q68DA7 1419 aa30.31■■■□□ 2.44
MSL1-204ENST00000578648 DDX10Q13206 875 aaKnown RBP30.3■■■□□ 2.44
MSL1-204ENST00000578648 FGD6Q6ZV73 1430 aa30.29■■■□□ 2.44
MSL1-204ENST00000578648 PPP1R15AO75807 674 aaPredicted RBP30.27■■■□□ 2.44
MSL1-204ENST00000578648 TDRD9Q8NDG6 1382 aaKnown RBP30.25■■■□□ 2.43
MSL1-204ENST00000578648 GAPVD1Q14C86 1478 aa30.24■■■□□ 2.43
MSL1-204ENST00000578648 PTPRKQ15262 1439 aa30.21■■■□□ 2.43
MSL1-204ENST00000578648 LRRIQ1Q96JM4 1722 aa30.21■■■□□ 2.43
MSL1-204ENST00000578648 MTUS2Q5JR59 1369 aa30.2■■■□□ 2.43
MSL1-204ENST00000578648 SAMD9Q5K651 1589 aa30.2■■■□□ 2.43
MSL1-204ENST00000578648 HIRIP3Q9BW71 556 aaPredicted RBP30.19■■■□□ 2.42
MSL1-204ENST00000578648 TARBP1Q13395 1621 aaKnown RBP30.18■■■□□ 2.42
MSL1-204ENST00000578648 CCDC18Q5T9S5 1454 aa30.15■■■□□ 2.42
MSL1-204ENST00000578648 GRIN2BQ13224 1484 aa30.13■■■□□ 2.41
MSL1-204ENST00000578648 HFM1A2PYH4 1435 aa30.13■■■□□ 2.41
MSL1-204ENST00000578648 NCOA2Q15596 1464 aa30.11■■■□□ 2.41
MSL1-204ENST00000578648 PTPN23Q9H3S7 1636 aa30.1■■■□□ 2.41
MSL1-204ENST00000578648 UACAQ9BZF9 1416 aa30.08■■■□□ 2.41
MSL1-204ENST00000578648 MRC2Q9UBG0 1479 aa30.07■■■□□ 2.4
MSL1-204ENST00000578648 MYOM3Q5VTT5 1437 aa30.07■■■□□ 2.4
MSL1-204ENST00000578648 NAIPQ13075 1403 aa30.05■■■□□ 2.4
MSL1-204ENST00000578648 MYT1Q01538 1121 aa30.05■■■□□ 2.4
MSL1-204ENST00000578648 TONSLQ96HA7 1378 aa30.05■■■□□ 2.4
MSL1-204ENST00000578648 THOC2Q8NI27 1593 aaKnown RBP30.02■■■□□ 2.4
MSL1-204ENST00000578648 SUPT6HQ7KZ85 1726 aaKnown RBP30.02■■■□□ 2.4
MSL1-204ENST00000578648 PBRM1Q86U86 1689 aa30■■■□□ 2.39
MSL1-204ENST00000578648 EHBP1L1Q8N3D4 1523 aa29.99■■■□□ 2.39
MSL1-204ENST00000578648 CCER2I3L3R5 266 aa29.97■■■□□ 2.39
MSL1-204ENST00000578648 MAGI3Q5TCQ9 1506 aa29.97■■■□□ 2.39
MSL1-204ENST00000578648 UGGT2Q9NYU1 1516 aa29.96■■■□□ 2.39
MSL1-204ENST00000578648 ARHGEF11O15085 1522 aa29.95■■■□□ 2.38
MSL1-204ENST00000578648 ANP32CO43423 234 aa29.94■■■□□ 2.38
MSL1-204ENST00000578648 TSHZ2Q9NRE2 1034 aa29.93■■■□□ 2.38
MSL1-204ENST00000578648 KDM5BQ9UGL1 1544 aa29.9■■■□□ 2.38
MSL1-204ENST00000578648 WDR62O43379 1518 aa29.88■■■□□ 2.37
MSL1-204ENST00000578648 RRP7BPQ9NSQ0 103 aa29.86■■■□□ 2.37
MSL1-204ENST00000578648 ADAMTS12P58397 1594 aa29.86■■■□□ 2.37
MSL1-204ENST00000578648 FKBP8Q14318 412 aa29.85■■■□□ 2.37
MSL1-204ENST00000578648 TCOF1Q13428 1488 aaKnown RBP29.84■■■□□ 2.37
MSL1-204ENST00000578648 BCANQ96GW7 911 aa29.84■■■□□ 2.37
MSL1-204ENST00000578648 IFT140Q96RY7 1462 aa29.84■■■□□ 2.37
MSL1-204ENST00000578648 CHIC2Q9UKJ5 165 aa29.83■■■□□ 2.37
MSL1-204ENST00000578648 TRIM52Q96A61 297 aa29.83■■■□□ 2.37
MSL1-204ENST00000578648 DENND4BO75064 1496 aaPredicted RBP29.8■■■□□ 2.36
MSL1-204ENST00000578648 HECW1Q76N89 1606 aa29.79■■■□□ 2.36
MSL1-204ENST00000578648 GCC2Q8IWJ2 1684 aa29.77■■■□□ 2.36
MSL1-204ENST00000578648 EPRSP07814 1512 aaKnown RBP29.77■■■□□ 2.36
MSL1-204ENST00000578648 KDM6BO15054 1643 aa29.75■■■□□ 2.35
MSL1-204ENST00000578648 IQGAP2Q13576 1575 aa29.75■■■□□ 2.35
MSL1-204ENST00000578648 ZNF608Q9ULD9 1512 aaPredicted RBP29.74■■■□□ 2.35
MSL1-204ENST00000578648 CDK13Q14004 1512 aaKnown RBP29.73■■■□□ 2.35
MSL1-204ENST00000578648 AKNAQ7Z591 1439 aa29.7■■■□□ 2.34
MSL1-204ENST00000578648 ERCC6Q03468 1493 aa29.68■■■□□ 2.34
MSL1-204ENST00000578648 MIA2Q96PC5 1412 aa29.67■■■□□ 2.34
MSL1-204ENST00000578648 ARID3CA6NKF2 412 aa29.66■■■□□ 2.34
MSL1-204ENST00000578648 HSPA5P11021 654 aaKnown RBP29.66■■■□□ 2.34
MSL1-204ENST00000578648 MPHOSPH9Q99550 1183 aa29.64■■■□□ 2.34
MSL1-204ENST00000578648 WASHC2AQ641Q2 1341 aa29.64■■■□□ 2.34
MSL1-204ENST00000578648 NEFLP07196 543 aa29.62■■■□□ 2.33
MSL1-204ENST00000578648 EIF4G3O43432 1585 aaKnown RBP29.62■■■□□ 2.33
MSL1-204ENST00000578648 FOXD1Q16676 465 aa29.57■■■□□ 2.32
MSL1-204ENST00000578648 L3MBTL2Q969R5 705 aa29.56■■■□□ 2.32
MSL1-204ENST00000578648 EIF4G2P78344 907 aaKnown RBP eCLIP29.54■■■□□ 2.32
MSL1-204ENST00000578648 KIAA0586Q9BVV6 1533 aa29.53■■■□□ 2.32
MSL1-204ENST00000578648 GRIN2AQ12879 1464 aa29.51■■■□□ 2.31
MSL1-204ENST00000578648 DAPK1P53355 1430 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms