RNA–Protein interactions for RNA: ENST00000573035.5

GTF2I-212, Transcript of general transcription factor IIi, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene GTF2I, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-212ENST00000573035 RRP7BPQ9NSQ0 103 aa19.57■□□□□ 0.72
GTF2I-212ENST00000573035 FAM9BQ8IZU0 186 aa19.55■□□□□ 0.72
GTF2I-212ENST00000573035 KDM2AQ9Y2K7 1162 aa19.54■□□□□ 0.72
GTF2I-212ENST00000573035 KIF27Q86VH2 1401 aa19.52■□□□□ 0.72
GTF2I-212ENST00000573035 IRX6P78412 446 aaPredicted RBP19.51■□□□□ 0.71
GTF2I-212ENST00000573035 UPF2Q9HAU5 1272 aaKnown RBP19.5■□□□□ 0.71
GTF2I-212ENST00000573035 CANXP27824 592 aaKnown RBP19.5■□□□□ 0.71
GTF2I-212ENST00000573035 PPM1GO15355 546 aaPredicted RBP19.5■□□□□ 0.71
GTF2I-212ENST00000573035 RBM19Q9Y4C8 960 aaKnown RBP19.5■□□□□ 0.71
GTF2I-212ENST00000573035 TRHP20396 242 aaPredicted RBP19.49■□□□□ 0.71
GTF2I-212ENST00000573035 DDRGK1Q96HY6 314 aa19.49■□□□□ 0.71
GTF2I-212ENST00000573035 ARID4BQ4LE39 1312 aaPredicted RBP19.48■□□□□ 0.71
GTF2I-212ENST00000573035 ERICH6BQ5W0A0 696 aa19.48■□□□□ 0.71
GTF2I-212ENST00000573035 NOP58Q9Y2X3 529 aaKnown RBP19.47■□□□□ 0.71
GTF2I-212ENST00000573035 DEKP35659 375 aaKnown RBP19.47■□□□□ 0.71
GTF2I-212ENST00000573035 PLEKHG5O94827 1062 aa19.46■□□□□ 0.71
GTF2I-212ENST00000573035 MROH2BQ7Z745 1585 aa19.46■□□□□ 0.71
GTF2I-212ENST00000573035 TSHZ2Q9NRE2 1034 aa19.45■□□□□ 0.7
GTF2I-212ENST00000573035 NEFMP07197 916 aa19.44■□□□□ 0.7
GTF2I-212ENST00000573035 MRS2Q9HD23 443 aa19.44■□□□□ 0.7
GTF2I-212ENST00000573035 PPP4R2Q9NY27 417 aa19.44■□□□□ 0.7
GTF2I-212ENST00000573035 CFDP1Q9UEE9 299 aaPredicted RBP19.43■□□□□ 0.7
GTF2I-212ENST00000573035 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
GTF2I-212ENST00000573035 CUX2O14529 1486 aa19.39■□□□□ 0.69
GTF2I-212ENST00000573035 RGL3Q3MIN7 710 aa19.39■□□□□ 0.69
GTF2I-212ENST00000573035 HIRIP3Q9BW71 556 aaPredicted RBP19.39■□□□□ 0.69
GTF2I-212ENST00000573035 CEP162Q5TB80 1403 aa19.38■□□□□ 0.69
GTF2I-212ENST00000573035 GOLGA3Q08378 1498 aa19.36■□□□□ 0.69
GTF2I-212ENST00000573035 TMC1Q8TDI8 760 aa19.35■□□□□ 0.69
GTF2I-212ENST00000573035 RTN4Q9NQC3 1192 aaKnown RBP19.33■□□□□ 0.69
GTF2I-212ENST00000573035 CARMIL1Q5VZK9 1371 aa19.33■□□□□ 0.69
GTF2I-212ENST00000573035 HSP90AA1P07900 732 aaKnown RBP19.33■□□□□ 0.68
GTF2I-212ENST00000573035 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.33■□□□□ 0.68
GTF2I-212ENST00000573035 SOGA1O94964 1423 aa19.33■□□□□ 0.68
GTF2I-212ENST00000573035 EEA1Q15075 1411 aa19.33■□□□□ 0.68
GTF2I-212ENST00000573035 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
GTF2I-212ENST00000573035 PPP1R15AO75807 674 aaPredicted RBP19.3■□□□□ 0.68
GTF2I-212ENST00000573035 SALL2Q9Y467 1007 aaPredicted RBP19.3■□□□□ 0.68
GTF2I-212ENST00000573035 PDS5BQ9NTI5 1447 aa19.29■□□□□ 0.68
GTF2I-212ENST00000573035 MLECQ14165 292 aa19.28■□□□□ 0.68
GTF2I-212ENST00000573035 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.67
GTF2I-212ENST00000573035 BECN1Q14457 450 aa19.26■□□□□ 0.67
GTF2I-212ENST00000573035 C14orf37Q86TY3 774 aa19.25■□□□□ 0.67
GTF2I-212ENST00000573035 TRIM44Q96DX7 344 aaPredicted RBP19.24■□□□□ 0.67
GTF2I-212ENST00000573035 ARXQ96QS3 562 aa19.23■□□□□ 0.67
GTF2I-212ENST00000573035 EIF4G2P78344 907 aaKnown RBP eCLIP19.23■□□□□ 0.675e-6■■□□□ 14.3
GTF2I-212ENST00000573035 CEP164Q9UPV0 1460 aa19.22■□□□□ 0.67
GTF2I-212ENST00000573035 CCER2I3L3R5 266 aa19.22■□□□□ 0.67
GTF2I-212ENST00000573035 ABCC8Q09428 1581 aa19.2■□□□□ 0.66
GTF2I-212ENST00000573035 TNIKQ9UKE5 1360 aa19.2■□□□□ 0.66
GTF2I-212ENST00000573035 SMARCA2P51531 1590 aa19.19■□□□□ 0.66
GTF2I-212ENST00000573035 LAS1LQ9Y4W2 734 aaKnown RBP19.19■□□□□ 0.66
GTF2I-212ENST00000573035 A0A0G2JS52 829 aa19.18■□□□□ 0.66
GTF2I-212ENST00000573035 CADPSQ9ULU8 1353 aa19.18■□□□□ 0.66
GTF2I-212ENST00000573035 ZBTB7CA1YPR0 619 aa19.17■□□□□ 0.66
GTF2I-212ENST00000573035 TNNT2P45379 298 aaPredicted RBP19.16■□□□□ 0.66
GTF2I-212ENST00000573035 NAP1L5Q96NT1 182 aaPredicted RBP19.15■□□□□ 0.66
GTF2I-212ENST00000573035 B4GALNT3Q6L9W6 998 aa19.13■□□□□ 0.65
GTF2I-212ENST00000573035 ATAD2BQ9ULI0 1458 aa19.11■□□□□ 0.65
GTF2I-212ENST00000573035 WIZO95785 1651 aa19.1■□□□□ 0.65
GTF2I-212ENST00000573035 TIMELESSQ9UNS1 1208 aa19.09■□□□□ 0.65
GTF2I-212ENST00000573035 GGT6Q6P531 493 aa19.08■□□□□ 0.65
GTF2I-212ENST00000573035 CCNB3Q8WWL7 1395 aa19.08■□□□□ 0.65
GTF2I-212ENST00000573035 SENP3-EIF4A1A0A087X0R7 540 aa19.07■□□□□ 0.64
GTF2I-212ENST00000573035 SIN3AQ96ST3 1273 aa19.04■□□□□ 0.64
GTF2I-212ENST00000573035 CYB5RLQ6IPT4 315 aa19.03■□□□□ 0.64
GTF2I-212ENST00000573035 GOLGA6L22H0YM25 854 aa19.03■□□□□ 0.64
GTF2I-212ENST00000573035 L1TD1Q5T7N2 865 aaKnown RBP19.03■□□□□ 0.64
GTF2I-212ENST00000573035 WDR43Q15061 677 aaKnown RBP eCLIP19.02■□□□□ 0.63
GTF2I-212ENST00000573035 LMOD2Q6P5Q4 547 aa19.01■□□□□ 0.63
GTF2I-212ENST00000573035 KANK4Q5T7N3 995 aaPredicted RBP19■□□□□ 0.63
GTF2I-212ENST00000573035 JPH4Q96JJ6 628 aa19■□□□□ 0.63
GTF2I-212ENST00000573035 FANCIQ9NVI1 1328 aa18.99■□□□□ 0.63
GTF2I-212ENST00000573035 IPO9Q96P70 1041 aaKnown RBP18.97■□□□□ 0.63
GTF2I-212ENST00000573035 CARMIL2Q6F5E8 1435 aa18.97■□□□□ 0.63
GTF2I-212ENST00000573035 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
GTF2I-212ENST00000573035 HAP1P54257 671 aaPredicted RBP18.96■□□□□ 0.63
GTF2I-212ENST00000573035 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.95■□□□□ 0.62
GTF2I-212ENST00000573035 USP35Q9P2H5 1018 aa18.94■□□□□ 0.62
GTF2I-212ENST00000573035 CARD11Q9BXL7 1154 aa18.93■□□□□ 0.62
GTF2I-212ENST00000573035 POGKQ9P215 609 aa18.91■□□□□ 0.62
GTF2I-212ENST00000573035 TOP2AP11388 1531 aaKnown RBP18.91■□□□□ 0.62
GTF2I-212ENST00000573035 FOXD1Q16676 465 aa18.9■□□□□ 0.62
GTF2I-212ENST00000573035 SAFB2Q14151 953 aaKnown RBP eCLIP18.9■□□□□ 0.62
GTF2I-212ENST00000573035 FANCD2Q9BXW9 1451 aa18.9■□□□□ 0.62
GTF2I-212ENST00000573035 TCERG1O14776 1098 aaKnown RBP18.89■□□□□ 0.61
GTF2I-212ENST00000573035 EFCAB2Q5VUJ9 269 aa18.87■□□□□ 0.61
GTF2I-212ENST00000573035 PNNQ9H307 717 aaKnown RBP18.87■□□□□ 0.61
GTF2I-212ENST00000573035 DCAF11Q8TEB1 546 aa18.87■□□□□ 0.61
GTF2I-212ENST00000573035 RSPH6AQ9H0K4 717 aa18.86■□□□□ 0.61
GTF2I-212ENST00000573035 NCLP19338 710 aaKnown RBP18.85■□□□□ 0.61
GTF2I-212ENST00000573035 SMARCA4P51532 1647 aa18.84■□□□□ 0.61
GTF2I-212ENST00000573035 OSCARQ8IYS5 282 aa18.84■□□□□ 0.61
GTF2I-212ENST00000573035 FHOD3Q2V2M9 1422 aa18.84■□□□□ 0.61
GTF2I-212ENST00000573035 HNRNPMP52272 730 aaKnown RBP eCLIP18.83■□□□□ 0.612e-6■■■■□ 22.5
GTF2I-212ENST00000573035 PTMAP06454 111 aaKnown RBP18.82■□□□□ 0.6
GTF2I-212ENST00000573035 SOX12O15370 315 aa18.82■□□□□ 0.6
GTF2I-212ENST00000573035 DNTTIP2Q5QJE6 756 aaKnown RBP18.81■□□□□ 0.6
GTF2I-212ENST00000573035 KIF3BO15066 747 aa18.81■□□□□ 0.6
GTF2I-212ENST00000573035 RGS3P49796 1198 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms