RNA–Protein interactions for RNA: ENST00000573034.7

SRGAP2-203, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRGAP2, Length 6,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-203ENST00000573034 ARID3AQ99856 593 aa11.77□□□□□ -0.53
SRGAP2-203ENST00000573034 WDR43Q15061 677 aaKnown RBP eCLIP11.75□□□□□ -0.53
SRGAP2-203ENST00000573034 MYH16Q9H6N6 1097 aa11.74□□□□□ -0.53
SRGAP2-203ENST00000573034 CHAF1AQ13111 956 aaPredicted RBP11.73□□□□□ -0.53
SRGAP2-203ENST00000573034 PLCB2Q00722 1185 aa11.72□□□□□ -0.53
SRGAP2-203ENST00000573034 RBM19Q9Y4C8 960 aaKnown RBP11.72□□□□□ -0.53
SRGAP2-203ENST00000573034 PPP4R2Q9NY27 417 aa11.72□□□□□ -0.53
SRGAP2-203ENST00000573034 TNNT3P45378 269 aaPredicted RBP11.71□□□□□ -0.54
SRGAP2-203ENST00000573034 GOLGA6L6A8MZA4 724 aa11.7□□□□□ -0.54
SRGAP2-203ENST00000573034 ZRSR1Q15695 479 aaKnown RBP11.7□□□□□ -0.54
SRGAP2-203ENST00000573034 CCDC180Q9P1Z9 1646 aa11.69□□□□□ -0.54
SRGAP2-203ENST00000573034 ZBTB7CA1YPR0 619 aa11.68□□□□□ -0.54
SRGAP2-203ENST00000573034 HSP90AB1P08238 724 aaKnown RBP11.66□□□□□ -0.54
SRGAP2-203ENST00000573034 VSIG10Q8N0Z9 540 aa11.66□□□□□ -0.54
SRGAP2-203ENST00000573034 HIRIP3Q9BW71 556 aaPredicted RBP11.66□□□□□ -0.54
SRGAP2-203ENST00000573034 CASC1Q6TDU7 716 aa11.65□□□□□ -0.55
SRGAP2-203ENST00000573034 HSP90AA2PQ14568 343 aaPredicted RBP11.64□□□□□ -0.55
SRGAP2-203ENST00000573034 PNNQ9H307 717 aaKnown RBP11.64□□□□□ -0.55
SRGAP2-203ENST00000573034 RSPH6AQ9H0K4 717 aa11.62□□□□□ -0.55
SRGAP2-203ENST00000573034 B4GALNT3Q6L9W6 998 aa11.62□□□□□ -0.55
SRGAP2-203ENST00000573034 RGS3P49796 1198 aa11.6□□□□□ -0.55
SRGAP2-203ENST00000573034 SPRYD3Q8NCJ5 442 aa11.6□□□□□ -0.55
SRGAP2-203ENST00000573034 SENP3-EIF4A1A0A087X0R7 540 aa11.59□□□□□ -0.55
SRGAP2-203ENST00000573034 DRC7Q8IY82 874 aa11.59□□□□□ -0.55
SRGAP2-203ENST00000573034 P3H3Q8IVL6 736 aa11.58□□□□□ -0.55
SRGAP2-203ENST00000573034 TSHZ2Q9NRE2 1034 aa11.58□□□□□ -0.55
SRGAP2-203ENST00000573034 HSCBQ8IWL3 235 aa11.58□□□□□ -0.56
SRGAP2-203ENST00000573034 NRDCO43847 1150 aa11.56□□□□□ -0.56
SRGAP2-203ENST00000573034 ZNF777Q9ULD5 760 aaPredicted RBP11.55□□□□□ -0.56
SRGAP2-203ENST00000573034 ARID3CA6NKF2 412 aa11.55□□□□□ -0.56
SRGAP2-203ENST00000573034 GZF1Q9H116 711 aaPredicted RBP11.53□□□□□ -0.56
SRGAP2-203ENST00000573034 GOLGA6L3A6NEY3 463 aa11.53□□□□□ -0.56
SRGAP2-203ENST00000573034 FTSJ3Q8IY81 847 aaKnown RBP11.52□□□□□ -0.57
SRGAP2-203ENST00000573034 KIAA2012Q0VF49 1180 aa11.51□□□□□ -0.57
SRGAP2-203ENST00000573034 PTMSP20962 102 aa11.51□□□□□ -0.57
SRGAP2-203ENST00000573034 EIF4G2P78344 907 aaKnown RBP eCLIP11.5□□□□□ -0.57
SRGAP2-203ENST00000573034 TIMELESSQ9UNS1 1208 aa11.5□□□□□ -0.57
SRGAP2-203ENST00000573034 A0A0U1RQG5 324 aaPredicted RBP11.5□□□□□ -0.57
SRGAP2-203ENST00000573034 PKNOX2Q96KN3 472 aa11.49□□□□□ -0.57
SRGAP2-203ENST00000573034 TULP1O00294 542 aaPredicted RBP11.49□□□□□ -0.57
SRGAP2-203ENST00000573034 CALRP27797 417 aaKnown RBP11.47□□□□□ -0.57
SRGAP2-203ENST00000573034 KDM2AQ9Y2K7 1162 aa11.47□□□□□ -0.57
SRGAP2-203ENST00000573034 SETQ01105 290 aaPredicted RBP11.47□□□□□ -0.57
SRGAP2-203ENST00000573034 CHGAP10645 457 aaKnown RBP11.47□□□□□ -0.57
SRGAP2-203ENST00000573034 IPO9Q96P70 1041 aaKnown RBP11.47□□□□□ -0.57
SRGAP2-203ENST00000573034 TAOK2Q9UL54 1235 aa11.46□□□□□ -0.58
SRGAP2-203ENST00000573034 GBP4Q96PP9 640 aa11.46□□□□□ -0.58
SRGAP2-203ENST00000573034 GOLGA6L4A6NEF3 574 aa11.45□□□□□ -0.58
SRGAP2-203ENST00000573034 PRKCSHP14314 528 aaPredicted RBP11.45□□□□□ -0.58
SRGAP2-203ENST00000573034 PODXL2Q9NZ53 605 aa11.45□□□□□ -0.58
SRGAP2-203ENST00000573034 ZNF771Q7L3S4 317 aaPredicted RBP11.44□□□□□ -0.58
SRGAP2-203ENST00000573034 GOLGA6L1Q8N7Z2 621 aa11.44□□□□□ -0.58
SRGAP2-203ENST00000573034 CHIC2Q9UKJ5 165 aa11.43□□□□□ -0.58
SRGAP2-203ENST00000573034 MYO15BQ96JP2 1530 aa11.43□□□□□ -0.58
SRGAP2-203ENST00000573034 FRAT1Q92837 279 aaPredicted RBP11.42□□□□□ -0.58
SRGAP2-203ENST00000573034 SLKQ9H2G2 1235 aaPredicted RBP11.41□□□□□ -0.58
SRGAP2-203ENST00000573034 NOC3LQ8WTT2 800 aaKnown RBP11.41□□□□□ -0.58
SRGAP2-203ENST00000573034 NAP1L2Q9ULW6 460 aaPredicted RBP11.38□□□□□ -0.59
SRGAP2-203ENST00000573034 GSE1Q14687 1217 aa11.36□□□□□ -0.59
SRGAP2-203ENST00000573034 MCCP23508 829 aa11.36□□□□□ -0.59
SRGAP2-203ENST00000573034 SYAP1Q96A49 352 aaPredicted RBP11.36□□□□□ -0.59
SRGAP2-203ENST00000573034 TCERG1O14776 1098 aaKnown RBP11.36□□□□□ -0.59
SRGAP2-203ENST00000573034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.36□□□□□ -0.598e-7■■□□□ 13.2
SRGAP2-203ENST00000573034 STAG3Q9UJ98 1225 aa11.36□□□□□ -0.59
SRGAP2-203ENST00000573034 APPP05067 770 aa11.35□□□□□ -0.59
SRGAP2-203ENST00000573034 FGD1P98174 961 aa11.35□□□□□ -0.59
SRGAP2-203ENST00000573034 USP35Q9P2H5 1018 aa11.34□□□□□ -0.59
SRGAP2-203ENST00000573034 ANO8Q9HCE9 1232 aaPredicted RBP11.34□□□□□ -0.59
SRGAP2-203ENST00000573034 KCNJ4P48050 445 aa11.33□□□□□ -0.6
SRGAP2-203ENST00000573034 FBLN2P98095 1184 aa11.33□□□□□ -0.6
SRGAP2-203ENST00000573034 NEUROD2Q15784 382 aa11.33□□□□□ -0.6
SRGAP2-203ENST00000573034 CFAP53Q96M91 514 aa11.33□□□□□ -0.6
SRGAP2-203ENST00000573034 MS4A1P11836 297 aa11.31□□□□□ -0.6
SRGAP2-203ENST00000573034 CHMP4BQ9H444 224 aaKnown RBP11.31□□□□□ -0.6
SRGAP2-203ENST00000573034 CCER2I3L3R5 266 aa11.31□□□□□ -0.6
SRGAP2-203ENST00000573034 FAM13BQ9NYF5 915 aa11.31□□□□□ -0.6
SRGAP2-203ENST00000573034 KNSTRNQ9Y448 316 aa11.31□□□□□ -0.6
SRGAP2-203ENST00000573034 TPM4P67936 248 aa11.3□□□□□ -0.6
SRGAP2-203ENST00000573034 OS9Q13438 667 aaPredicted RBP11.29□□□□□ -0.6
SRGAP2-203ENST00000573034 CALD1Q05682 793 aaKnown RBP11.28□□□□□ -0.6
SRGAP2-203ENST00000573034 CC2D1BQ5T0F9 858 aaKnown RBP11.28□□□□□ -0.6
SRGAP2-203ENST00000573034 CFAP44Q96MT7 982 aa11.28□□□□□ -0.6
SRGAP2-203ENST00000573034 DDX11L8A8MPP1 907 aa11.28□□□□□ -0.6
SRGAP2-203ENST00000573034 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
SRGAP2-203ENST00000573034 MAPK8IP3Q9UPT6 1336 aa11.28□□□□□ -0.6
SRGAP2-203ENST00000573034 PATL2C9JE40 543 aaKnown RBP11.27□□□□□ -0.6
SRGAP2-203ENST00000573034 MFAP1P55081 439 aaKnown RBP11.27□□□□□ -0.61
SRGAP2-203ENST00000573034 RRP7BPQ9NSQ0 103 aa11.26□□□□□ -0.61
SRGAP2-203ENST00000573034 PHF14O94880 888 aa11.25□□□□□ -0.61
SRGAP2-203ENST00000573034 TEX35Q5T0J7 233 aa11.25□□□□□ -0.61
SRGAP2-203ENST00000573034 GNL2Q13823 731 aaKnown RBP11.25□□□□□ -0.61
SRGAP2-203ENST00000573034 FANCIQ9NVI1 1328 aa11.24□□□□□ -0.61
SRGAP2-203ENST00000573034 CLSTN1O94985 981 aa11.24□□□□□ -0.61
SRGAP2-203ENST00000573034 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.24□□□□□ -0.61
SRGAP2-203ENST00000573034 NOM1Q5C9Z4 860 aaKnown RBP11.23□□□□□ -0.61
SRGAP2-203ENST00000573034 CARD11Q9BXL7 1154 aa11.23□□□□□ -0.61
SRGAP2-203ENST00000573034 HTATSF1O43719 755 aaKnown RBP11.23□□□□□ -0.61
SRGAP2-203ENST00000573034 CSPP1Q1MSJ5 1256 aa11.22□□□□□ -0.61
SRGAP2-203ENST00000573034 GPS2Q13227 327 aa11.22□□□□□ -0.61
SRGAP2-203ENST00000573034 SLC4A3P48751 1232 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms