RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
PRPF8-204ENST00000572445 CYB5RLQ6IPT4 315 aa11.4□□□□□ -0.58
PRPF8-204ENST00000572445 PLCB2Q00722 1185 aa11.39□□□□□ -0.59
PRPF8-204ENST00000572445 PBRM1Q86U86 1689 aa11.39□□□□□ -0.59
PRPF8-204ENST00000572445 CUX1P39880 1505 aa11.39□□□□□ -0.59
PRPF8-204ENST00000572445 ARAP1Q96P48 1450 aa11.38□□□□□ -0.59
PRPF8-204ENST00000572445 SOGA1O94964 1423 aa11.37□□□□□ -0.59
PRPF8-204ENST00000572445 SUPT5HO00267 1087 aaKnown RBP11.37□□□□□ -0.59
PRPF8-204ENST00000572445 WDR97A6NE52 1622 aa11.36□□□□□ -0.59
PRPF8-204ENST00000572445 TRHP20396 242 aaPredicted RBP11.36□□□□□ -0.59
PRPF8-204ENST00000572445 SYNJ1O43426 1573 aa11.32□□□□□ -0.6
PRPF8-204ENST00000572445 CLASP1Q7Z460 1538 aa11.3□□□□□ -0.6
PRPF8-204ENST00000572445 CHMP7Q8WUX9 453 aaPredicted RBP11.3□□□□□ -0.6
PRPF8-204ENST00000572445 GRIN2BQ13224 1484 aa11.28□□□□□ -0.6
PRPF8-204ENST00000572445 MAGI1Q96QZ7 1491 aaPredicted RBP11.27□□□□□ -0.6
PRPF8-204ENST00000572445 ABCA5Q8WWZ7 1642 aa11.26□□□□□ -0.61
PRPF8-204ENST00000572445 SYNJ2O15056 1496 aa11.25□□□□□ -0.61
PRPF8-204ENST00000572445 GAPVD1Q14C86 1478 aa11.25□□□□□ -0.61
PRPF8-204ENST00000572445 PRKCSHP14314 528 aaPredicted RBP11.24□□□□□ -0.61
PRPF8-204ENST00000572445 HAP1P54257 671 aaPredicted RBP11.23□□□□□ -0.61
PRPF8-204ENST00000572445 U3KPZ7 1027 aaPredicted RBP11.23□□□□□ -0.61
PRPF8-204ENST00000572445 ERCC6L2Q5T890 1561 aa11.22□□□□□ -0.61
PRPF8-204ENST00000572445 SAMD1Q6SPF0 538 aaPredicted RBP11.22□□□□□ -0.61
PRPF8-204ENST00000572445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.22□□□□□ -0.61
PRPF8-204ENST00000572445 ADAMTS12P58397 1594 aa11.21□□□□□ -0.61
PRPF8-204ENST00000572445 ABCA10Q8WWZ4 1543 aa11.19□□□□□ -0.62
PRPF8-204ENST00000572445 CEP170Q5SW79 1584 aa11.19□□□□□ -0.62
PRPF8-204ENST00000572445 BIVM-ERCC5R4GMW8 1640 aa11.18□□□□□ -0.62
PRPF8-204ENST00000572445 DCAF8L1A6NGE4 600 aa11.17□□□□□ -0.62
PRPF8-204ENST00000572445 FBXO3Q9UK99 471 aa11.17□□□□□ -0.62
PRPF8-204ENST00000572445 TOP2BQ02880 1626 aa11.17□□□□□ -0.62
PRPF8-204ENST00000572445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.16□□□□□ -0.62
PRPF8-204ENST00000572445 HNRNPUL2Q1KMD3 747 aaKnown RBP11.16□□□□□ -0.62
PRPF8-204ENST00000572445 GRIN2AQ12879 1464 aa11.16□□□□□ -0.62
PRPF8-204ENST00000572445 WRNQ14191 1432 aaPredicted RBP eCLIP11.15□□□□□ -0.62
PRPF8-204ENST00000572445 ZNF219Q9P2Y4 722 aaPredicted RBP11.14□□□□□ -0.63
PRPF8-204ENST00000572445 SPDYE4A6NLX3 237 aa11.13□□□□□ -0.63
PRPF8-204ENST00000572445 VASPP50552 380 aaPredicted RBP11.13□□□□□ -0.63
PRPF8-204ENST00000572445 BCANQ96GW7 911 aa11.11□□□□□ -0.63
PRPF8-204ENST00000572445 PROM2Q8N271 834 aa11.1□□□□□ -0.63
PRPF8-204ENST00000572445 IFNLR1Q8IU57 520 aaPredicted RBP11.09□□□□□ -0.63
PRPF8-204ENST00000572445 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
PRPF8-204ENST00000572445 MKRN4PQ13434 485 aaPredicted RBP11.08□□□□□ -0.64
PRPF8-204ENST00000572445 SHROOM2Q13796 1616 aa11.07□□□□□ -0.64
PRPF8-204ENST00000572445 FHAD1B1AJZ9 1412 aa11.07□□□□□ -0.64
PRPF8-204ENST00000572445 NUP160Q12769 1436 aa11.07□□□□□ -0.64
PRPF8-204ENST00000572445 RUSC2Q8N2Y8 1516 aa11.06□□□□□ -0.64
PRPF8-204ENST00000572445 PKD2Q13563 968 aa11.06□□□□□ -0.64
PRPF8-204ENST00000572445 KIF13AQ9H1H9 1805 aa11.06□□□□□ -0.64
PRPF8-204ENST00000572445 ERICH3Q5RHP9 1530 aa11.05□□□□□ -0.64
PRPF8-204ENST00000572445 TTBK1Q5TCY1 1321 aaPredicted RBP11.05□□□□□ -0.64
PRPF8-204ENST00000572445 PRG4Q92954 1404 aaPredicted RBP11.04□□□□□ -0.64
PRPF8-204ENST00000572445 TSPOAP1O95153 1857 aa11.02□□□□□ -0.64
PRPF8-204ENST00000572445 VSIG10Q8N0Z9 540 aa11.01□□□□□ -0.65
PRPF8-204ENST00000572445 ADCY10Q96PN6 1610 aa10.97□□□□□ -0.65
PRPF8-204ENST00000572445 CUL7Q14999 1698 aa10.96□□□□□ -0.65
PRPF8-204ENST00000572445 KDM2AQ9Y2K7 1162 aa10.96□□□□□ -0.65
PRPF8-204ENST00000572445 JPH4Q96JJ6 628 aa10.94□□□□□ -0.66
PRPF8-204ENST00000572445 TPRNQ4KMQ1 711 aa10.93□□□□□ -0.66
PRPF8-204ENST00000572445 DIP2BQ9P265 1576 aa10.93□□□□□ -0.66
PRPF8-204ENST00000572445 FAM69CQ0P6D2 419 aa10.91□□□□□ -0.66
PRPF8-204ENST00000572445 KIF27Q86VH2 1401 aa10.91□□□□□ -0.66
PRPF8-204ENST00000572445 KDM6BO15054 1643 aa10.88□□□□□ -0.67
PRPF8-204ENST00000572445 NPM1P06748 294 aaKnown RBP eCLIP10.88□□□□□ -0.67
PRPF8-204ENST00000572445 IQGAP2Q13576 1575 aa10.86□□□□□ -0.67
PRPF8-204ENST00000572445 MAPKBP1O60336 1514 aa10.86□□□□□ -0.67
PRPF8-204ENST00000572445 KIAA0586Q9BVV6 1533 aa10.86□□□□□ -0.67
PRPF8-204ENST00000572445 IGF1RP08069 1367 aa10.86□□□□□ -0.67
PRPF8-204ENST00000572445 ABCC10Q5T3U5 1492 aa10.86□□□□□ -0.67
PRPF8-204ENST00000572445 CARMIL1Q5VZK9 1371 aa10.83□□□□□ -0.68
PRPF8-204ENST00000572445 PAXIP1Q6ZW49 1069 aaPredicted RBP10.82□□□□□ -0.68
PRPF8-204ENST00000572445 BBXQ8WY36 941 aaPredicted RBP10.82□□□□□ -0.68
PRPF8-204ENST00000572445 PTPRGP23470 1445 aa10.82□□□□□ -0.68
PRPF8-204ENST00000572445 CTTNBP2Q8WZ74 1663 aa10.8□□□□□ -0.68
PRPF8-204ENST00000572445 APLP2Q06481 763 aa10.8□□□□□ -0.68
PRPF8-204ENST00000572445 PPRC1Q5VV67 1664 aaKnown RBP10.79□□□□□ -0.68
PRPF8-204ENST00000572445 ABCC2Q92887 1545 aa10.79□□□□□ -0.68
PRPF8-204ENST00000572445 CARMIL2Q6F5E8 1435 aa10.79□□□□□ -0.68
PRPF8-204ENST00000572445 ASXL2Q76L83 1435 aa10.78□□□□□ -0.68
PRPF8-204ENST00000572445 KIAA0556O60303 1618 aa10.78□□□□□ -0.68
PRPF8-204ENST00000572445 ZCCHC11Q5TAX3 1644 aaKnown RBP10.78□□□□□ -0.68
PRPF8-204ENST00000572445 CFAP44Q96MT7 982 aa10.78□□□□□ -0.68
PRPF8-204ENST00000572445 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.78□□□□□ -0.68
PRPF8-204ENST00000572445 TNIKQ9UKE5 1360 aa10.77□□□□□ -0.68
PRPF8-204ENST00000572445 DISP1Q96F81 1524 aa10.76□□□□□ -0.69
PRPF8-204ENST00000572445 ECM2O94769 699 aaPredicted RBP10.76□□□□□ -0.69
PRPF8-204ENST00000572445 ARID3CA6NKF2 412 aa10.75□□□□□ -0.69
PRPF8-204ENST00000572445 RAPGEF2Q9Y4G8 1499 aa10.74□□□□□ -0.69
PRPF8-204ENST00000572445 UACAQ9BZF9 1416 aa10.73□□□□□ -0.69
PRPF8-204ENST00000572445 SPOCK2Q92563 424 aa10.72□□□□□ -0.69
PRPF8-204ENST00000572445 TSHZ2Q9NRE2 1034 aa10.72□□□□□ -0.69
PRPF8-204ENST00000572445 RGL2O15211 777 aa10.71□□□□□ -0.69
PRPF8-204ENST00000572445 PLB1Q6P1J6 1458 aa10.71□□□□□ -0.69
PRPF8-204ENST00000572445 MAP3K4Q9Y6R4 1608 aa10.7□□□□□ -0.7
PRPF8-204ENST00000572445 UGGT2Q9NYU1 1516 aa10.7□□□□□ -0.7
PRPF8-204ENST00000572445 KDM4FA0A1W2PPD8 638 aa10.7□□□□□ -0.7
PRPF8-204ENST00000572445 POLA2Q14181 598 aa10.7□□□□□ -0.7
PRPF8-204ENST00000572445 SPINK5Q9NQ38 1064 aaPredicted RBP10.7□□□□□ -0.7
PRPF8-204ENST00000572445 EPRSP07814 1512 aaKnown RBP10.69□□□□□ -0.7
PRPF8-204ENST00000572445 ADGRL1O94910 1474 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms