RNA–Protein interactions for RNA: ENST00000572088.1

COX11-203, Transcript of cytochrome c oxidase copper chaperone COX11, humanhuman

Gene COX11, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX11-203ENST00000572088 VASPP50552 380 aaPredicted RBP9.53□□□□□ -0.88
COX11-203ENST00000572088 YTHDC1Q96MU7 727 aaKnown RBP9.53□□□□□ -0.88
COX11-203ENST00000572088 ATAD2BQ9ULI0 1458 aa9.53□□□□□ -0.88
COX11-203ENST00000572088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.53□□□□□ -0.88
COX11-203ENST00000572088 HNRNPUL2Q1KMD3 747 aaKnown RBP9.53□□□□□ -0.88
COX11-203ENST00000572088 POLA2Q14181 598 aa9.5□□□□□ -0.89
COX11-203ENST00000572088 EEA1Q15075 1411 aa9.49□□□□□ -0.89
COX11-203ENST00000572088 SOGA1O94964 1423 aa9.48□□□□□ -0.89
COX11-203ENST00000572088 WRNQ14191 1432 aaPredicted RBP eCLIP9.48□□□□□ -0.89
COX11-203ENST00000572088 SYNJ1O43426 1573 aa9.47□□□□□ -0.89
COX11-203ENST00000572088 PKD2Q13563 968 aa9.46□□□□□ -0.89
COX11-203ENST00000572088 ABCB7O75027 752 aa9.46□□□□□ -0.89
COX11-203ENST00000572088 RUSC2Q8N2Y8 1516 aa9.46□□□□□ -0.9
COX11-203ENST00000572088 BAZ1BQ9UIG0 1483 aaKnown RBP9.45□□□□□ -0.9
COX11-203ENST00000572088 CCER1Q8TC90 406 aaPredicted RBP9.44□□□□□ -0.9
COX11-203ENST00000572088 TNIKQ9UKE5 1360 aa9.44□□□□□ -0.9
COX11-203ENST00000572088 RANGAP1P46060 587 aaPredicted RBP9.43□□□□□ -0.9
COX11-203ENST00000572088 FBLN2P98095 1184 aa9.42□□□□□ -0.9
COX11-203ENST00000572088 KIF21BO75037 1637 aa9.42□□□□□ -0.9
COX11-203ENST00000572088 HMGXB3Q12766 1538 aa9.41□□□□□ -0.9
COX11-203ENST00000572088 CEP162Q5TB80 1403 aa9.41□□□□□ -0.9
COX11-203ENST00000572088 PODXL2Q9NZ53 605 aa9.41□□□□□ -0.9
COX11-203ENST00000572088 FBXO3Q9UK99 471 aa9.41□□□□□ -0.9
COX11-203ENST00000572088 CAPN15O75808 1086 aa9.41□□□□□ -0.9
COX11-203ENST00000572088 ARXQ96QS3 562 aa9.4□□□□□ -0.91
COX11-203ENST00000572088 BIVM-ERCC5R4GMW8 1640 aa9.4□□□□□ -0.91
COX11-203ENST00000572088 TOP2BQ02880 1626 aa9.39□□□□□ -0.91
COX11-203ENST00000572088 NCAPD3P42695 1498 aa9.38□□□□□ -0.91
COX11-203ENST00000572088 GOLGA3Q08378 1498 aa9.38□□□□□ -0.91
COX11-203ENST00000572088 NPM1P06748 294 aaKnown RBP eCLIP9.35□□□□□ -0.91
COX11-203ENST00000572088 KDM2AQ9Y2K7 1162 aa9.35□□□□□ -0.91
COX11-203ENST00000572088 CEP164Q9UPV0 1460 aa9.34□□□□□ -0.91
COX11-203ENST00000572088 PROM2Q8N271 834 aa9.33□□□□□ -0.92
COX11-203ENST00000572088 CFAP44Q96MT7 982 aa9.32□□□□□ -0.92
COX11-203ENST00000572088 PRDM2Q13029 1718 aa9.31□□□□□ -0.92
COX11-203ENST00000572088 TPRNQ4KMQ1 711 aa9.29□□□□□ -0.92
COX11-203ENST00000572088 TSHZ2Q9NRE2 1034 aa9.29□□□□□ -0.92
COX11-203ENST00000572088 TAOK2Q9UL54 1235 aa9.29□□□□□ -0.92
COX11-203ENST00000572088 PAXIP1Q6ZW49 1069 aaPredicted RBP9.28□□□□□ -0.92
COX11-203ENST00000572088 CFTRP13569 1480 aa9.28□□□□□ -0.92
COX11-203ENST00000572088 CUX1P39880 1505 aa9.28□□□□□ -0.92
COX11-203ENST00000572088 RAPGEF2Q9Y4G8 1499 aa9.27□□□□□ -0.93
COX11-203ENST00000572088 ZNF316A6NFI3 1004 aaPredicted RBP9.27□□□□□ -0.93
COX11-203ENST00000572088 ERICH3Q5RHP9 1530 aa9.27□□□□□ -0.93
COX11-203ENST00000572088 RGL2O15211 777 aa9.27□□□□□ -0.93
COX11-203ENST00000572088 PRXQ9BXM0 1461 aa9.26□□□□□ -0.93
COX11-203ENST00000572088 SUPT16HQ9Y5B9 1047 aaKnown RBP9.25□□□□□ -0.93
COX11-203ENST00000572088 CLSPNQ9HAW4 1339 aa9.25□□□□□ -0.93
COX11-203ENST00000572088 ECM2O94769 699 aaPredicted RBP9.24□□□□□ -0.93
COX11-203ENST00000572088 MIER1Q8N108 512 aa9.24□□□□□ -0.93
COX11-203ENST00000572088 CLIP1P30622 1438 aa9.23□□□□□ -0.93
COX11-203ENST00000572088 VPS8Q8N3P4 1428 aa9.23□□□□□ -0.93
COX11-203ENST00000572088 UBTFP17480 764 aaKnown RBP9.23□□□□□ -0.93
COX11-203ENST00000572088 OSCARQ8IYS5 282 aa9.23□□□□□ -0.93
COX11-203ENST00000572088 HOMEZQ8IX15 550 aa9.22□□□□□ -0.93
COX11-203ENST00000572088 BCANQ96GW7 911 aa9.19□□□□□ -0.94
COX11-203ENST00000572088 ARAP1Q96P48 1450 aa9.18□□□□□ -0.94
COX11-203ENST00000572088 PLCD3Q8N3E9 789 aa9.17□□□□□ -0.94
COX11-203ENST00000572088 RNF39Q9H2S5 420 aa9.17□□□□□ -0.94
COX11-203ENST00000572088 CC2D2AQ9P2K1 1620 aa9.15□□□□□ -0.95
COX11-203ENST00000572088 KIF27Q86VH2 1401 aa9.15□□□□□ -0.95
COX11-203ENST00000572088 ZNF692Q9BU19 519 aaPredicted RBP9.14□□□□□ -0.95
COX11-203ENST00000572088 CADPSQ9ULU8 1353 aa9.14□□□□□ -0.95
COX11-203ENST00000572088 CHGAP10645 457 aaKnown RBP9.13□□□□□ -0.95
COX11-203ENST00000572088 CIZ1Q9ULV3 898 aaPredicted RBP9.13□□□□□ -0.95
COX11-203ENST00000572088 C14orf37Q86TY3 774 aa9.12□□□□□ -0.95
COX11-203ENST00000572088 ANO8Q9HCE9 1232 aaPredicted RBP9.12□□□□□ -0.95
COX11-203ENST00000572088 SPOCK2Q92563 424 aa9.1□□□□□ -0.95
COX11-203ENST00000572088 NPM2Q86SE8 214 aaKnown RBP9.1□□□□□ -0.95
COX11-203ENST00000572088 ARHGAP35Q9NRY4 1499 aa9.09□□□□□ -0.95
COX11-203ENST00000572088 IGF1RP08069 1367 aa9.08□□□□□ -0.96
COX11-203ENST00000572088 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.08□□□□□ -0.96
COX11-203ENST00000572088 FGD5Q6ZNL6 1462 aa9.08□□□□□ -0.96
COX11-203ENST00000572088 VSIG10Q8N0Z9 540 aa9.08□□□□□ -0.96
COX11-203ENST00000572088 RBM19Q9Y4C8 960 aaKnown RBP9.08□□□□□ -0.96
COX11-203ENST00000572088 CUX2O14529 1486 aa9.06□□□□□ -0.96
COX11-203ENST00000572088 DNMBPQ6XZF7 1577 aa9.05□□□□□ -0.96
COX11-203ENST00000572088 MYT1LQ9UL68 1186 aa9.05□□□□□ -0.96
COX11-203ENST00000572088 RRBP1Q9P2E9 1410 aaKnown RBP9.04□□□□□ -0.96
COX11-203ENST00000572088 MAP3K1Q13233 1512 aa9.04□□□□□ -0.96
COX11-203ENST00000572088 FANCD2Q9BXW9 1451 aa9.04□□□□□ -0.96
COX11-203ENST00000572088 WDR97A6NE52 1622 aa9.04□□□□□ -0.96
COX11-203ENST00000572088 BBXQ8WY36 941 aaPredicted RBP9.03□□□□□ -0.96
COX11-203ENST00000572088 ABCA10Q8WWZ4 1543 aa9.02□□□□□ -0.96
COX11-203ENST00000572088 DEKP35659 375 aaKnown RBP9.02□□□□□ -0.97
COX11-203ENST00000572088 RNF25Q96BH1 459 aaPredicted RBP9.02□□□□□ -0.97
COX11-203ENST00000572088 TOPBP1Q92547 1522 aa9.01□□□□□ -0.97
COX11-203ENST00000572088 NEFLP07196 543 aa9.01□□□□□ -0.97
COX11-203ENST00000572088 DSG3P32926 999 aa9.01□□□□□ -0.97
COX11-203ENST00000572088 KANK4Q5T7N3 995 aaPredicted RBP9.01□□□□□ -0.97
COX11-203ENST00000572088 SPRYD3Q8NCJ5 442 aa9.01□□□□□ -0.97
COX11-203ENST00000572088 CARMIL1Q5VZK9 1371 aa9□□□□□ -0.97
COX11-203ENST00000572088 TIAM1Q13009 1591 aa9□□□□□ -0.97
COX11-203ENST00000572088 LAMC3Q9Y6N6 1575 aa9□□□□□ -0.97
COX11-203ENST00000572088 DHX37Q8IY37 1157 aaKnown RBP8.99□□□□□ -0.97
COX11-203ENST00000572088 CFAP43Q8NDM7 1665 aa8.99□□□□□ -0.97
COX11-203ENST00000572088 POLA1P09884 1462 aaPredicted RBP8.99□□□□□ -0.97
COX11-203ENST00000572088 PDIA4P13667 645 aaKnown RBP8.99□□□□□ -0.97
COX11-203ENST00000572088 CUL7Q14999 1698 aa8.99□□□□□ -0.97
COX11-203ENST00000572088 CCDC136Q96JN2 1154 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms