RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 CADPSQ9ULU8 1353 aa17.87■□□□□ 0.45
LYRM1-210ENST00000568820 SOGA1O94964 1423 aa17.87■□□□□ 0.45
LYRM1-210ENST00000568820 TOP2BQ02880 1626 aa17.86■□□□□ 0.45
LYRM1-210ENST00000568820 PRDM2Q13029 1718 aa17.82■□□□□ 0.44
LYRM1-210ENST00000568820 PROM2Q8N271 834 aa17.81■□□□□ 0.44
LYRM1-210ENST00000568820 BIVM-ERCC5R4GMW8 1640 aa17.81■□□□□ 0.44
LYRM1-210ENST00000568820 REM2Q8IYK8 340 aaPredicted RBP17.76■□□□□ 0.43
LYRM1-210ENST00000568820 RUSC2Q8N2Y8 1516 aa17.74■□□□□ 0.43
LYRM1-210ENST00000568820 CUX1P39880 1505 aa17.72■□□□□ 0.43
LYRM1-210ENST00000568820 TNIKQ9UKE5 1360 aa17.71■□□□□ 0.43
LYRM1-210ENST00000568820 GOLGA3Q08378 1498 aa17.71■□□□□ 0.43
LYRM1-210ENST00000568820 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
LYRM1-210ENST00000568820 KIF21BO75037 1637 aa17.66■□□□□ 0.42
LYRM1-210ENST00000568820 FANCD2Q9BXW9 1451 aa17.65■□□□□ 0.42
LYRM1-210ENST00000568820 LAMC3Q9Y6N6 1575 aa17.65■□□□□ 0.42
LYRM1-210ENST00000568820 UBTFP17480 764 aaKnown RBP17.64■□□□□ 0.42
LYRM1-210ENST00000568820 KIF27Q86VH2 1401 aa17.61■□□□□ 0.41
LYRM1-210ENST00000568820 SPDYE1Q8NFV5 336 aaPredicted RBP17.61■□□□□ 0.41
LYRM1-210ENST00000568820 TRIM26Q12899 539 aaPredicted RBP17.6■□□□□ 0.41
LYRM1-210ENST00000568820 CEP162Q5TB80 1403 aa17.6■□□□□ 0.41
LYRM1-210ENST00000568820 PCGF6Q9BYE7 350 aa17.6■□□□□ 0.41
LYRM1-210ENST00000568820 PITPNM1O00562 1244 aa17.56■□□□□ 0.4
LYRM1-210ENST00000568820 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
LYRM1-210ENST00000568820 NESP48681 1621 aa17.54■□□□□ 0.4
LYRM1-210ENST00000568820 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
LYRM1-210ENST00000568820 ERICH3Q5RHP9 1530 aa17.53■□□□□ 0.4
LYRM1-210ENST00000568820 FGD5Q6ZNL6 1462 aa17.52■□□□□ 0.39
LYRM1-210ENST00000568820 PRXQ9BXM0 1461 aa17.51■□□□□ 0.39
LYRM1-210ENST00000568820 STAG3Q9UJ98 1225 aa17.51■□□□□ 0.39
LYRM1-210ENST00000568820 RAPGEF2Q9Y4G8 1499 aa17.5■□□□□ 0.39
LYRM1-210ENST00000568820 CUX2O14529 1486 aa17.47■□□□□ 0.39
LYRM1-210ENST00000568820 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
LYRM1-210ENST00000568820 CLEC11AQ9Y240 323 aa17.45■□□□□ 0.38
LYRM1-210ENST00000568820 CHRDL2Q6WN34 429 aa17.43■□□□□ 0.38
LYRM1-210ENST00000568820 CLIP1P30622 1438 aa17.43■□□□□ 0.38
LYRM1-210ENST00000568820 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
LYRM1-210ENST00000568820 ABCA10Q8WWZ4 1543 aa17.4■□□□□ 0.38
LYRM1-210ENST00000568820 IGF1RP08069 1367 aa17.4■□□□□ 0.38
LYRM1-210ENST00000568820 FBXO3Q9UK99 471 aa17.38■□□□□ 0.37
LYRM1-210ENST00000568820 URB2Q14146 1524 aaKnown RBP17.37■□□□□ 0.37
LYRM1-210ENST00000568820 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
LYRM1-210ENST00000568820 PRR29P0C7W0 189 aa17.32■□□□□ 0.36
LYRM1-210ENST00000568820 RAD54L2Q9Y4B4 1467 aa17.32■□□□□ 0.36
LYRM1-210ENST00000568820 KIF21AQ7Z4S6 1674 aa17.31■□□□□ 0.36
LYRM1-210ENST00000568820 VPS8Q8N3P4 1428 aa17.31■□□□□ 0.36
LYRM1-210ENST00000568820 HRCP23327 699 aa17.3■□□□□ 0.36
LYRM1-210ENST00000568820 FXR2P51116 673 aaKnown RBP eCLIP17.27■□□□□ 0.36
LYRM1-210ENST00000568820 MRC2Q9UBG0 1479 aa17.27■□□□□ 0.35
LYRM1-210ENST00000568820 PPARGC1BQ86YN6 1023 aaKnown RBP17.24■□□□□ 0.35
LYRM1-210ENST00000568820 CUL7Q14999 1698 aa17.24■□□□□ 0.35
LYRM1-210ENST00000568820 WDR97A6NE52 1622 aa17.24■□□□□ 0.35
LYRM1-210ENST00000568820 RANGAP1P46060 587 aaPredicted RBP17.22■□□□□ 0.35
LYRM1-210ENST00000568820 PIP4P2Q8N4L2 257 aa17.21■□□□□ 0.35
LYRM1-210ENST00000568820 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
LYRM1-210ENST00000568820 ABCA5Q8WWZ7 1642 aa17.19■□□□□ 0.34
LYRM1-210ENST00000568820 ARAP1Q96P48 1450 aa17.17■□□□□ 0.34
LYRM1-210ENST00000568820 TDRD9Q8NDG6 1382 aaKnown RBP17.17■□□□□ 0.34
LYRM1-210ENST00000568820 TARBP1Q13395 1621 aaKnown RBP17.16■□□□□ 0.34
LYRM1-210ENST00000568820 VASPP50552 380 aaPredicted RBP17.15■□□□□ 0.34
LYRM1-210ENST00000568820 WDR62O43379 1518 aa17.14■□□□□ 0.33
LYRM1-210ENST00000568820 CREBZFQ9NS37 354 aa17.13■□□□□ 0.33
LYRM1-210ENST00000568820 ERCC6Q03468 1493 aa17.13■□□□□ 0.33
LYRM1-210ENST00000568820 ARHGAP35Q9NRY4 1499 aa17.13■□□□□ 0.33
LYRM1-210ENST00000568820 IFT140Q96RY7 1462 aa17.11■□□□□ 0.33
LYRM1-210ENST00000568820 PRKAR2AP13861 404 aaKnown RBP17.1■□□□□ 0.33
LYRM1-210ENST00000568820 ZEB1P37275 1124 aaPredicted RBP17.09■□□□□ 0.33
LYRM1-210ENST00000568820 TTBK1Q5TCY1 1321 aaPredicted RBP17.07■□□□□ 0.32
LYRM1-210ENST00000568820 MIER1Q8N108 512 aa17.07■□□□□ 0.32
LYRM1-210ENST00000568820 CHADLQ6NUI6 762 aa17.06■□□□□ 0.32
LYRM1-210ENST00000568820 EFCAB5A4FU69 1503 aa17.05■□□□□ 0.32
LYRM1-210ENST00000568820 PLCD3Q8N3E9 789 aa17.04■□□□□ 0.32
LYRM1-210ENST00000568820 FHAD1B1AJZ9 1412 aa17.04■□□□□ 0.32
LYRM1-210ENST00000568820 GRIN2BQ13224 1484 aa17.04■□□□□ 0.32
LYRM1-210ENST00000568820 CTTNBP2Q8WZ74 1663 aa17.03■□□□□ 0.32
LYRM1-210ENST00000568820 AQRO60306 1485 aaKnown RBP eCLIP17.01■□□□□ 0.31
LYRM1-210ENST00000568820 PBRM1Q86U86 1689 aa17.01■□□□□ 0.31
LYRM1-210ENST00000568820 PLEKHG5O94827 1062 aa17.01■□□□□ 0.31
LYRM1-210ENST00000568820 THOC2Q8NI27 1593 aaKnown RBP16.99■□□□□ 0.31
LYRM1-210ENST00000568820 MAP3K1Q13233 1512 aa16.99■□□□□ 0.31
LYRM1-210ENST00000568820 MNX1P50219 401 aaPredicted RBP16.97■□□□□ 0.31
LYRM1-210ENST00000568820 POTEHQ6S545 545 aa16.96■□□□□ 0.31
LYRM1-210ENST00000568820 ADAMTS12P58397 1594 aa16.96■□□□□ 0.31
LYRM1-210ENST00000568820 FARP1Q9Y4F1 1045 aaPredicted RBP16.94■□□□□ 0.3
LYRM1-210ENST00000568820 FMN1Q68DA7 1419 aa16.93■□□□□ 0.3
LYRM1-210ENST00000568820 ZNF608Q9ULD9 1512 aaPredicted RBP16.93■□□□□ 0.3
LYRM1-210ENST00000568820 ZBTB47Q9UFB7 747 aaPredicted RBP16.91■□□□□ 0.3
LYRM1-210ENST00000568820 FHOD3Q2V2M9 1422 aa16.9■□□□□ 0.3
LYRM1-210ENST00000568820 KANK4Q5T7N3 995 aaPredicted RBP16.9■□□□□ 0.3
LYRM1-210ENST00000568820 P3H3Q8IVL6 736 aa16.9■□□□□ 0.3
LYRM1-210ENST00000568820 FYCO1Q9BQS8 1478 aa16.9■□□□□ 0.3
LYRM1-210ENST00000568820 IFNLR1Q8IU57 520 aaPredicted RBP16.89■□□□□ 0.29
LYRM1-210ENST00000568820 EIF4G3O43432 1585 aaKnown RBP16.88■□□□□ 0.29
LYRM1-210ENST00000568820 TIAM1Q13009 1591 aa16.88■□□□□ 0.29
LYRM1-210ENST00000568820 SAMD9Q5K651 1589 aa16.88■□□□□ 0.29
LYRM1-210ENST00000568820 CASKIN1Q8WXD9 1431 aa16.88■□□□□ 0.29
LYRM1-210ENST00000568820 MAGI1Q96QZ7 1491 aaPredicted RBP16.86■□□□□ 0.29
LYRM1-210ENST00000568820 CCER1Q8TC90 406 aaPredicted RBP16.86■□□□□ 0.29
LYRM1-210ENST00000568820 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
LYRM1-210ENST00000568820 PCF11O94913 1555 aaKnown RBP16.85■□□□□ 0.29
LYRM1-210ENST00000568820 IQGAP2Q13576 1575 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms