RNA–Protein interactions for RNA: ENST00000568670.5

FANCI-215, Transcript of FA complementation group I, human

TSL 3

Gene FANCI, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCI-215	ENST00000568670	RNF39	Q9H2S5	420 aa		12.76	□□□□□ -0.37
FANCI-215	ENST00000568670	CEP170	Q5SW79	1584 aa		12.73	□□□□□ -0.37
FANCI-215	ENST00000568670	ABCA5	Q8WWZ7	1642 aa		12.72	□□□□□ -0.37
FANCI-215	ENST00000568670	TSPOAP1	O95153	1857 aa		12.72	□□□□□ -0.37
FANCI-215	ENST00000568670	ILDR1	Q86SU0	546 aa	Predicted RBP	12.71	□□□□□ -0.37
FANCI-215	ENST00000568670	GRIN2A	Q12879	1464 aa		12.68	□□□□□ -0.38
FANCI-215	ENST00000568670	SHROOM2	Q13796	1616 aa		12.68	□□□□□ -0.38
FANCI-215	ENST00000568670	ADAMTS12	P58397	1594 aa		12.66	□□□□□ -0.38
FANCI-215	ENST00000568670	ABCA10	Q8WWZ4	1543 aa		12.64	□□□□□ -0.39
FANCI-215	ENST00000568670	KDM6B	O15054	1643 aa		12.64	□□□□□ -0.39
FANCI-215	ENST00000568670	KDM4F	A0A1W2PPD8	638 aa		12.62	□□□□□ -0.39
FANCI-215	ENST00000568670	NUP160	Q12769	1436 aa		12.62	□□□□□ -0.39
FANCI-215	ENST00000568670	FAM69C	Q0P6D2	419 aa		12.61	□□□□□ -0.39
FANCI-215	ENST00000568670	DIP2B	Q9P265	1576 aa		12.6	□□□□□ -0.39
FANCI-215	ENST00000568670	ABCC10	Q5T3U5	1492 aa		12.59	□□□□□ -0.39
FANCI-215	ENST00000568670	HOXD11	P31277	338 aa	Predicted RBP	12.58	□□□□□ -0.4
FANCI-215	ENST00000568670	PRG4	Q92954	1404 aa	Predicted RBP	12.57	□□□□□ -0.4
FANCI-215	ENST00000568670	C1QBP	Q07021	282 aa	Known RBP	12.56	□□□□□ -0.4
FANCI-215	ENST00000568670	NPM1	P06748	294 aa	Known RBP eCLIP	12.55	□□□□□ -0.4
FANCI-215	ENST00000568670	ADCY10	Q96PN6	1610 aa		12.55	□□□□□ -0.4
FANCI-215	ENST00000568670	FHAD1	B1AJZ9	1412 aa		12.54	□□□□□ -0.4
FANCI-215	ENST00000568670	MAPKBP1	O60336	1514 aa		12.54	□□□□□ -0.4
FANCI-215	ENST00000568670	BIVM-ERCC5	R4GMW8	1640 aa		12.51	□□□□□ -0.41
FANCI-215	ENST00000568670	JPH4	Q96JJ6	628 aa		12.51	□□□□□ -0.41
FANCI-215	ENST00000568670	WRN	Q14191	1432 aa	Predicted RBP eCLIP	12.5	□□□□□ -0.41
FANCI-215	ENST00000568670	RUSC2	Q8N2Y8	1516 aa		12.5	□□□□□ -0.41
FANCI-215	ENST00000568670	ERICH3	Q5RHP9	1530 aa		12.49	□□□□□ -0.41
FANCI-215	ENST00000568670	TOP2B	Q02880	1626 aa		12.47	□□□□□ -0.41
FANCI-215	ENST00000568670	ADGRL1	O94910	1474 aa		12.46	□□□□□ -0.42
FANCI-215	ENST00000568670	HECW2	Q9P2P5	1572 aa		12.45	□□□□□ -0.42
FANCI-215	ENST00000568670	PPRC1	Q5VV67	1664 aa	Known RBP	12.45	□□□□□ -0.42
FANCI-215	ENST00000568670	PPP4R3CP	Q6ZMV5	832 aa		12.43	□□□□□ -0.42
FANCI-215	ENST00000568670	CUL7	Q14999	1698 aa		12.41	□□□□□ -0.42
FANCI-215	ENST00000568670	TTBK1	Q5TCY1	1321 aa	Predicted RBP	12.39	□□□□□ -0.43
FANCI-215	ENST00000568670	RNF216	Q9NWF9	866 aa	Predicted RBP	12.36	□□□□□ -0.43
FANCI-215	ENST00000568670	CNKSR2	Q8WXI2	1034 aa		12.33	□□□□□ -0.44
FANCI-215	ENST00000568670	GLI2	P10070	1586 aa		12.32	□□□□□ -0.44
FANCI-215	ENST00000568670	KIAA0586	Q9BVV6	1533 aa		12.32	□□□□□ -0.44
FANCI-215	ENST00000568670	ASXL2	Q76L83	1435 aa		12.31	□□□□□ -0.44
FANCI-215	ENST00000568670	MAP3K4	Q9Y6R4	1608 aa		12.31	□□□□□ -0.44
FANCI-215	ENST00000568670	PTPRG	P23470	1445 aa		12.29	□□□□□ -0.44
FANCI-215	ENST00000568670	COL17A1	Q9UMD9	1497 aa	Predicted RBP	12.29	□□□□□ -0.44
FANCI-215	ENST00000568670	ABCC2	Q92887	1545 aa		12.29	□□□□□ -0.44
FANCI-215	ENST00000568670	PLB1	Q6P1J6	1458 aa		12.28	□□□□□ -0.44
FANCI-215	ENST00000568670	SUPT5H	O00267	1087 aa	Known RBP	12.27	□□□□□ -0.45
FANCI-215	ENST00000568670	FBXO41	Q8TF61	875 aa		12.26	□□□□□ -0.45
FANCI-215	ENST00000568670	ZCCHC11	Q5TAX3	1644 aa	Known RBP	12.26	□□□□□ -0.45
FANCI-215	ENST00000568670	KIF21B	O75037	1637 aa		12.24	□□□□□ -0.45
FANCI-215	ENST00000568670	TEX14	Q8IWB6	1497 aa		12.24	□□□□□ -0.45
FANCI-215	ENST00000568670	EPRS	P07814	1512 aa	Known RBP	12.23	□□□□□ -0.45
FANCI-215	ENST00000568670	CARMIL2	Q6F5E8	1435 aa		12.23	□□□□□ -0.45
FANCI-215	ENST00000568670	TNIK	Q9UKE5	1360 aa		12.23	□□□□□ -0.45
FANCI-215	ENST00000568670	IQGAP2	Q13576	1575 aa		12.21	□□□□□ -0.46
FANCI-215	ENST00000568670	UHRF1BP1L	A0JNW5	1464 aa		12.2	□□□□□ -0.46
FANCI-215	ENST00000568670	UACA	Q9BZF9	1416 aa		12.2	□□□□□ -0.46
FANCI-215	ENST00000568670	IGF1R	P08069	1367 aa		12.18	□□□□□ -0.46
FANCI-215	ENST00000568670	CFAP43	Q8NDM7	1665 aa		12.17	□□□□□ -0.46
FANCI-215	ENST00000568670	POTEH	Q6S545	545 aa		12.16	□□□□□ -0.46
FANCI-215	ENST00000568670	KIF27	Q86VH2	1401 aa		12.16	□□□□□ -0.46
FANCI-215	ENST00000568670	KDM5B	Q9UGL1	1544 aa		12.16	□□□□□ -0.46
FANCI-215	ENST00000568670	DISP1	Q96F81	1524 aa		12.13	□□□□□ -0.47
FANCI-215	ENST00000568670	CARMIL1	Q5VZK9	1371 aa		12.13	□□□□□ -0.47
FANCI-215	ENST00000568670	WDR7	Q9Y4E6	1490 aa		12.12	□□□□□ -0.47
FANCI-215	ENST00000568670	LMTK3	Q96Q04	1460 aa		12.11	□□□□□ -0.47
FANCI-215	ENST00000568670	KIAA0556	O60303	1618 aa		12.11	□□□□□ -0.47
FANCI-215	ENST00000568670	CD109	Q6YHK3	1445 aa		12.1	□□□□□ -0.47
FANCI-215	ENST00000568670	ADAMTSL3	P82987	1691 aa		12.1	□□□□□ -0.47
FANCI-215	ENST00000568670	KCNH8	Q96L42	1107 aa		12.09	□□□□□ -0.47
FANCI-215	ENST00000568670	MAGI3	Q5TCQ9	1506 aa		12.07	□□□□□ -0.48
FANCI-215	ENST00000568670	CTTNBP2	Q8WZ74	1663 aa		12.07	□□□□□ -0.48
FANCI-215	ENST00000568670	PTPRM	P28827	1452 aa		12.07	□□□□□ -0.48
FANCI-215	ENST00000568670	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.06	□□□□□ -0.48	1e-7	■■■■□ 19.5
FANCI-215	ENST00000568670	UGGT2	Q9NYU1	1516 aa		12.06	□□□□□ -0.48
FANCI-215	ENST00000568670	BCORL1	Q5H9F3	1711 aa		12.06	□□□□□ -0.48
FANCI-215	ENST00000568670	MADD	Q8WXG6	1647 aa		12.05	□□□□□ -0.48
FANCI-215	ENST00000568670	RIMS1	Q86UR5	1692 aa	Known RBP	12.05	□□□□□ -0.48
FANCI-215	ENST00000568670	PCF11	O94913	1555 aa	Known RBP	12.05	□□□□□ -0.48
FANCI-215	ENST00000568670	ARAP3	Q8WWN8	1544 aa		12	□□□□□ -0.49
FANCI-215	ENST00000568670	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.99	□□□□□ -0.49
FANCI-215	ENST00000568670	ABCA8	O94911	1581 aa		11.99	□□□□□ -0.49
FANCI-215	ENST00000568670	ILDR2	Q71H61	639 aa		11.98	□□□□□ -0.49
FANCI-215	ENST00000568670	RAPGEF2	Q9Y4G8	1499 aa		11.97	□□□□□ -0.49
FANCI-215	ENST00000568670	DISP3	Q9P2K9	1392 aa		11.97	□□□□□ -0.49
FANCI-215	ENST00000568670	HSPA2	P54652	639 aa		11.96	□□□□□ -0.49
FANCI-215	ENST00000568670	ARID3C	A6NKF2	412 aa		11.95	□□□□□ -0.5
FANCI-215	ENST00000568670	ABCA9	Q8IUA7	1624 aa		11.94	□□□□□ -0.5
FANCI-215	ENST00000568670	FRMPD1	Q5SYB0	1578 aa		11.94	□□□□□ -0.5
FANCI-215	ENST00000568670	SOCS7	O14512	581 aa		11.94	□□□□□ -0.5
FANCI-215	ENST00000568670	RAPGEF3	O95398	923 aa		11.94	□□□□□ -0.5
FANCI-215	ENST00000568670	CERK	Q8TCT0	537 aa		11.94	□□□□□ -0.5
FANCI-215	ENST00000568670	GOLGA3	Q08378	1498 aa		11.93	□□□□□ -0.5
FANCI-215	ENST00000568670	FER1L4	A9Z1Z3	1794 aa		11.92	□□□□□ -0.5
FANCI-215	ENST00000568670	RICTOR	Q6R327	1708 aa		11.91	□□□□□ -0.5
FANCI-215	ENST00000568670	SPATA31D1	Q6ZQQ2	1576 aa		11.9	□□□□□ -0.5
FANCI-215	ENST00000568670	ARHGEF40	Q8TER5	1519 aa		11.89	□□□□□ -0.51
FANCI-215	ENST00000568670	SIGLEC1	Q9BZZ2	1709 aa		11.89	□□□□□ -0.51
FANCI-215	ENST00000568670	PHLDB1	Q86UU1	1377 aa		11.88	□□□□□ -0.51
FANCI-215	ENST00000568670	NEO1	Q92859	1461 aa		11.88	□□□□□ -0.51
FANCI-215	ENST00000568670	ATP10B	O94823	1461 aa		11.87	□□□□□ -0.51
FANCI-215	ENST00000568670	PREX1	Q8TCU6	1659 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms