RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 KIF27Q86VH2 1401 aa27.69■■■□□ 2.02
AC009041.2-204ENST00000568394 NESP48681 1621 aa27.66■■■□□ 2.02
AC009041.2-204ENST00000568394 CUX1P39880 1505 aa27.63■■■□□ 2.01
AC009041.2-204ENST00000568394 TDRD9Q8NDG6 1382 aaKnown RBP27.62■■■□□ 2.01
AC009041.2-204ENST00000568394 DEKP35659 375 aaKnown RBP27.62■■■□□ 2.01
AC009041.2-204ENST00000568394 FBLN2P98095 1184 aa27.62■■■□□ 2.01
AC009041.2-204ENST00000568394 CHIC2Q9UKJ5 165 aa27.61■■■□□ 2.01
AC009041.2-204ENST00000568394 KIF21BO75037 1637 aa27.6■■■□□ 2.01
AC009041.2-204ENST00000568394 ARAP1Q96P48 1450 aa27.59■■■□□ 2.01
AC009041.2-204ENST00000568394 RAD54L2Q9Y4B4 1467 aa27.59■■■□□ 2.01
AC009041.2-204ENST00000568394 CARMIL1Q5VZK9 1371 aa27.56■■■□□ 2
AC009041.2-204ENST00000568394 B4GALNT3Q6L9W6 998 aa27.5■■□□□ 1.99
AC009041.2-204ENST00000568394 RAB3GAP2Q9H2M9 1393 aa27.5■■□□□ 1.99
AC009041.2-204ENST00000568394 CADPSQ9ULU8 1353 aa27.5■■□□□ 1.99
AC009041.2-204ENST00000568394 IGF1RP08069 1367 aa27.49■■□□□ 1.99
AC009041.2-204ENST00000568394 NCAPD3P42695 1498 aa27.49■■□□□ 1.99
AC009041.2-204ENST00000568394 PRKCSHP14314 528 aaPredicted RBP27.48■■□□□ 1.99
AC009041.2-204ENST00000568394 CCNB3Q8WWL7 1395 aa27.48■■□□□ 1.99
AC009041.2-204ENST00000568394 SENP3-EIF4A1A0A087X0R7 540 aa27.47■■□□□ 1.99
AC009041.2-204ENST00000568394 FHOD3Q2V2M9 1422 aa27.44■■□□□ 1.98
AC009041.2-204ENST00000568394 PEG3Q9GZU2 1588 aa27.42■■□□□ 1.98
AC009041.2-204ENST00000568394 PPP1R15AO75807 674 aaPredicted RBP27.41■■□□□ 1.98
AC009041.2-204ENST00000568394 FGD5Q6ZNL6 1462 aa27.41■■□□□ 1.98
AC009041.2-204ENST00000568394 FAM9BQ8IZU0 186 aa27.41■■□□□ 1.98
AC009041.2-204ENST00000568394 RTN4Q9NQC3 1192 aaKnown RBP27.4■■□□□ 1.98
AC009041.2-204ENST00000568394 TOP2BQ02880 1626 aa27.39■■□□□ 1.98
AC009041.2-204ENST00000568394 RRP7BPQ9NSQ0 103 aa27.37■■□□□ 1.97
AC009041.2-204ENST00000568394 FANCIQ9NVI1 1328 aa27.36■■□□□ 1.97
AC009041.2-204ENST00000568394 CFTRP13569 1480 aa27.36■■□□□ 1.97
AC009041.2-204ENST00000568394 CCER2I3L3R5 266 aa27.34■■□□□ 1.97
AC009041.2-204ENST00000568394 PRXQ9BXM0 1461 aa27.34■■□□□ 1.97
AC009041.2-204ENST00000568394 RTL5Q5HYW3 569 aaPredicted RBP27.33■■□□□ 1.97
AC009041.2-204ENST00000568394 ANO8Q9HCE9 1232 aaPredicted RBP27.33■■□□□ 1.96
AC009041.2-204ENST00000568394 ARHGAP35Q9NRY4 1499 aa27.32■■□□□ 1.96
AC009041.2-204ENST00000568394 FANCD2Q9BXW9 1451 aa27.3■■□□□ 1.96
AC009041.2-204ENST00000568394 POLR3GLQ9BT43 218 aa27.28■■□□□ 1.96
AC009041.2-204ENST00000568394 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
AC009041.2-204ENST00000568394 FOXD1Q16676 465 aa27.26■■□□□ 1.96
AC009041.2-204ENST00000568394 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
AC009041.2-204ENST00000568394 TONSLQ96HA7 1378 aa27.25■■□□□ 1.95
AC009041.2-204ENST00000568394 NOP58Q9Y2X3 529 aaKnown RBP27.24■■□□□ 1.95
AC009041.2-204ENST00000568394 CCDC136Q96JN2 1154 aa27.24■■□□□ 1.95
AC009041.2-204ENST00000568394 NPM2Q86SE8 214 aaKnown RBP27.23■■□□□ 1.95
AC009041.2-204ENST00000568394 PPP4R2Q9NY27 417 aa27.23■■□□□ 1.95
AC009041.2-204ENST00000568394 PAK3O75914 559 aaPredicted RBP27.22■■□□□ 1.95
AC009041.2-204ENST00000568394 ZNF777Q9ULD5 760 aaPredicted RBP27.22■■□□□ 1.95
AC009041.2-204ENST00000568394 PHLDB1Q86UU1 1377 aa27.22■■□□□ 1.95
AC009041.2-204ENST00000568394 SETD5Q9C0A6 1442 aa27.17■■□□□ 1.94
AC009041.2-204ENST00000568394 MTUS2Q5JR59 1369 aa27.15■■□□□ 1.94
AC009041.2-204ENST00000568394 ZNF326Q5BKZ1 582 aaKnown RBP27.15■■□□□ 1.94
AC009041.2-204ENST00000568394 MYT1LQ9UL68 1186 aa27.13■■□□□ 1.93
AC009041.2-204ENST00000568394 ANP32AP39687 249 aaKnown RBP27.12■■□□□ 1.93
AC009041.2-204ENST00000568394 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.11■■□□□ 1.93
AC009041.2-204ENST00000568394 RRBP1Q9P2E9 1410 aaKnown RBP27.11■■□□□ 1.93
AC009041.2-204ENST00000568394 MRS2Q9HD23 443 aa27.11■■□□□ 1.93
AC009041.2-204ENST00000568394 SALL2Q9Y467 1007 aaPredicted RBP27.09■■□□□ 1.93
AC009041.2-204ENST00000568394 CCDC184Q52MB2 194 aa27.08■■□□□ 1.93
AC009041.2-204ENST00000568394 HMGXB3Q12766 1538 aa27.07■■□□□ 1.92
AC009041.2-204ENST00000568394 ZBTB47Q9UFB7 747 aaPredicted RBP27.07■■□□□ 1.92
AC009041.2-204ENST00000568394 MAPKBP1O60336 1514 aa27.03■■□□□ 1.92
AC009041.2-204ENST00000568394 IL27Q8NEV9 243 aa27.01■■□□□ 1.92
AC009041.2-204ENST00000568394 LAS1LQ9Y4W2 734 aaKnown RBP27■■□□□ 1.91
AC009041.2-204ENST00000568394 POLA1P09884 1462 aaPredicted RBP27■■□□□ 1.91
AC009041.2-204ENST00000568394 AQRO60306 1485 aaKnown RBP eCLIP26.99■■□□□ 1.91
AC009041.2-204ENST00000568394 BIVM-ERCC5R4GMW8 1640 aa26.96■■□□□ 1.91
AC009041.2-204ENST00000568394 HSPA5P11021 654 aaKnown RBP26.93■■□□□ 1.9
AC009041.2-204ENST00000568394 EIF5BO60841 1220 aaKnown RBP26.91■■□□□ 1.9
AC009041.2-204ENST00000568394 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
AC009041.2-204ENST00000568394 ERICH3Q5RHP9 1530 aa26.9■■□□□ 1.9
AC009041.2-204ENST00000568394 ZNF644Q9H582 1327 aaPredicted RBP26.89■■□□□ 1.9
AC009041.2-204ENST00000568394 PDS5BQ9NTI5 1447 aa26.88■■□□□ 1.89
AC009041.2-204ENST00000568394 TIMELESSQ9UNS1 1208 aa26.85■■□□□ 1.89
AC009041.2-204ENST00000568394 CHMP7Q8WUX9 453 aaPredicted RBP26.83■■□□□ 1.89
AC009041.2-204ENST00000568394 LRRC9Q6ZRR7 1453 aa26.83■■□□□ 1.89
AC009041.2-204ENST00000568394 IPO9Q96P70 1041 aaKnown RBP26.82■■□□□ 1.88
AC009041.2-204ENST00000568394 EIF4G2P78344 907 aaKnown RBP eCLIP26.82■■□□□ 1.88
AC009041.2-204ENST00000568394 WASHC2AQ641Q2 1341 aa26.81■■□□□ 1.88
AC009041.2-204ENST00000568394 NEFMP07197 916 aa26.81■■□□□ 1.88
AC009041.2-204ENST00000568394 URB2Q14146 1524 aaKnown RBP26.78■■□□□ 1.88
AC009041.2-204ENST00000568394 FHAD1B1AJZ9 1412 aa26.76■■□□□ 1.87
AC009041.2-204ENST00000568394 ERICH6BQ5W0A0 696 aa26.75■■□□□ 1.87
AC009041.2-204ENST00000568394 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
AC009041.2-204ENST00000568394 PCF11O94913 1555 aaKnown RBP26.72■■□□□ 1.87
AC009041.2-204ENST00000568394 PRKRIP1Q9H875 184 aaPredicted RBP26.7■■□□□ 1.86
AC009041.2-204ENST00000568394 KDM2AQ9Y2K7 1162 aa26.67■■□□□ 1.86
AC009041.2-204ENST00000568394 TIAM1Q13009 1591 aa26.67■■□□□ 1.86
AC009041.2-204ENST00000568394 AKNAQ7Z591 1439 aa26.67■■□□□ 1.86
AC009041.2-204ENST00000568394 C11orf95C9JLR9 678 aaPredicted RBP26.64■■□□□ 1.85
AC009041.2-204ENST00000568394 SENP3Q9H4L4 574 aaPredicted RBP26.64■■□□□ 1.85
AC009041.2-204ENST00000568394 PTPRKQ15262 1439 aa26.62■■□□□ 1.85
AC009041.2-204ENST00000568394 SLC4A1APQ9BWU0 796 aaKnown RBP26.61■■□□□ 1.85
AC009041.2-204ENST00000568394 ZBED9Q6R2W3 1325 aa26.61■■□□□ 1.85
AC009041.2-204ENST00000568394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.59■■□□□ 1.85
AC009041.2-204ENST00000568394 ZNF608Q9ULD9 1512 aaPredicted RBP26.58■■□□□ 1.85
AC009041.2-204ENST00000568394 DAXXQ9UER7 740 aaPredicted RBP26.58■■□□□ 1.85
AC009041.2-204ENST00000568394 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
AC009041.2-204ENST00000568394 L3MBTL2Q969R5 705 aa26.54■■□□□ 1.84
AC009041.2-204ENST00000568394 FGD6Q6ZV73 1430 aa26.54■■□□□ 1.84
AC009041.2-204ENST00000568394 DNMBPQ6XZF7 1577 aa26.54■■□□□ 1.84
AC009041.2-204ENST00000568394 ABCA10Q8WWZ4 1543 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms