RNA–Protein interactions for RNA: ENST00000567357.5

TK2-218, Transcript of thymidine kinase 2, mitochondrial, human

TSL 1 (best)

Gene TK2, Length 2,266 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TK2-218	ENST00000567357	LRRC9	Q6ZRR7	1453 aa		33.89	■■■■□ 3.02
TK2-218	ENST00000567357	PCF11	O94913	1555 aa	Known RBP	33.89	■■■■□ 3.02
TK2-218	ENST00000567357	NEUROD1	Q13562	356 aa		33.88	■■■■□ 3.01
TK2-218	ENST00000567357	P3H3	Q8IVL6	736 aa		33.87	■■■■□ 3.01
TK2-218	ENST00000567357	WDR97	A6NE52	1622 aa		33.85	■■■■□ 3.01
TK2-218	ENST00000567357	CFAP43	Q8NDM7	1665 aa		33.83	■■■■□ 3.01
TK2-218	ENST00000567357	ITGAE	P38570	1179 aa		33.82	■■■■□ 3
TK2-218	ENST00000567357	FHOD3	Q2V2M9	1422 aa		33.82	■■■■□ 3
TK2-218	ENST00000567357	EFCAB5	A4FU69	1503 aa		33.79	■■■■□ 3
TK2-218	ENST00000567357	CTTNBP2	Q8WZ74	1663 aa		33.79	■■■■□ 3
TK2-218	ENST00000567357	PHLDB1	Q86UU1	1377 aa		33.76	■■■■□ 3
TK2-218	ENST00000567357	DNAJC5B	Q9UF47	199 aa		33.75	■■■□□ 2.99
TK2-218	ENST00000567357	CENPB	P07199	599 aa	Predicted RBP	33.74	■■■□□ 2.99
TK2-218	ENST00000567357	ABCA5	Q8WWZ7	1642 aa		33.72	■■■□□ 2.99
TK2-218	ENST00000567357	FYCO1	Q9BQS8	1478 aa		33.71	■■■□□ 2.99
TK2-218	ENST00000567357	PDS5B	Q9NTI5	1447 aa		33.71	■■■□□ 2.99
TK2-218	ENST00000567357	TDRD9	Q8NDG6	1382 aa	Known RBP	33.69	■■■□□ 2.98
TK2-218	ENST00000567357	ATP1B4	Q9UN42	357 aa	Predicted RBP	33.69	■■■□□ 2.98
TK2-218	ENST00000567357	RAB3GAP2	Q9H2M9	1393 aa		33.67	■■■□□ 2.98
TK2-218	ENST00000567357	MIER1	Q8N108	512 aa		33.67	■■■□□ 2.98
TK2-218	ENST00000567357	CASKIN1	Q8WXD9	1431 aa		33.66	■■■□□ 2.98
TK2-218	ENST00000567357	AQR	O60306	1485 aa	Known RBP eCLIP	33.64	■■■□□ 2.98	2e-9	■■■■■ 39.4
TK2-218	ENST00000567357	KIF21A	Q7Z4S6	1674 aa		33.64	■■■□□ 2.98
TK2-218	ENST00000567357	GAPVD1	Q14C86	1478 aa		33.63	■■■□□ 2.97
TK2-218	ENST00000567357	FAM50A	Q14320	339 aa	Known RBP	33.56	■■■□□ 2.96
TK2-218	ENST00000567357	SETD5	Q9C0A6	1442 aa		33.55	■■■□□ 2.96
TK2-218	ENST00000567357	FMN1	Q68DA7	1419 aa		33.55	■■■□□ 2.96
TK2-218	ENST00000567357	MAPKBP1	O60336	1514 aa		33.54	■■■□□ 2.96
TK2-218	ENST00000567357	SNAPC4	Q5SXM2	1469 aa		33.53	■■■□□ 2.96
TK2-218	ENST00000567357	SAMD9	Q5K651	1589 aa		33.51	■■■□□ 2.96
TK2-218	ENST00000567357	YTHDC1	Q96MU7	727 aa	Known RBP	33.49	■■■□□ 2.95
TK2-218	ENST00000567357	TARBP1	Q13395	1621 aa	Known RBP	33.49	■■■□□ 2.95
TK2-218	ENST00000567357	GTF3C3	Q9Y5Q9	886 aa		33.48	■■■□□ 2.95
TK2-218	ENST00000567357	LRRIQ1	Q96JM4	1722 aa		33.38	■■■□□ 2.93
TK2-218	ENST00000567357	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.37	■■■□□ 2.93
TK2-218	ENST00000567357	GRIN2B	Q13224	1484 aa		33.34	■■■□□ 2.93
TK2-218	ENST00000567357	FGD6	Q6ZV73	1430 aa		33.34	■■■□□ 2.93
TK2-218	ENST00000567357	MTUS2	Q5JR59	1369 aa		33.33	■■■□□ 2.93
TK2-218	ENST00000567357	PBRM1	Q86U86	1689 aa		33.32	■■■□□ 2.92
TK2-218	ENST00000567357	THOC2	Q8NI27	1593 aa	Known RBP	33.27	■■■□□ 2.92
TK2-218	ENST00000567357	MRC2	Q9UBG0	1479 aa		33.23	■■■□□ 2.91
TK2-218	ENST00000567357	NCOA2	Q15596	1464 aa		33.21	■■■□□ 2.91
TK2-218	ENST00000567357	ADAMTS12	P58397	1594 aa		33.21	■■■□□ 2.91
TK2-218	ENST00000567357	SIN3A	Q96ST3	1273 aa		33.2	■■■□□ 2.91
TK2-218	ENST00000567357	EHBP1L1	Q8N3D4	1523 aa		33.17	■■■□□ 2.9
TK2-218	ENST00000567357	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.16	■■■□□ 2.9
TK2-218	ENST00000567357	IQGAP2	Q13576	1575 aa		33.15	■■■□□ 2.9
TK2-218	ENST00000567357	MYOM3	Q5VTT5	1437 aa		33.15	■■■□□ 2.9
TK2-218	ENST00000567357	PTPRK	Q15262	1439 aa		33.15	■■■□□ 2.9
TK2-218	ENST00000567357	MAGI3	Q5TCQ9	1506 aa		33.12	■■■□□ 2.89
TK2-218	ENST00000567357	CCDC18	Q5T9S5	1454 aa		33.08	■■■□□ 2.89
TK2-218	ENST00000567357	UGGT2	Q9NYU1	1516 aa		33.08	■■■□□ 2.89
TK2-218	ENST00000567357	HFM1	A2PYH4	1435 aa		33.08	■■■□□ 2.89
TK2-218	ENST00000567357	HECW1	Q76N89	1606 aa		33.06	■■■□□ 2.88
TK2-218	ENST00000567357	ARHGEF11	O15085	1522 aa		33.06	■■■□□ 2.88
TK2-218	ENST00000567357	PTPN23	Q9H3S7	1636 aa		33.05	■■■□□ 2.88
TK2-218	ENST00000567357	ZNF608	Q9ULD9	1512 aa	Predicted RBP	33.03	■■■□□ 2.88
TK2-218	ENST00000567357	IFT140	Q96RY7	1462 aa		33	■■■□□ 2.87
TK2-218	ENST00000567357	PELP1	Q8IZL8	1130 aa	Known RBP	33	■■■□□ 2.87
TK2-218	ENST00000567357	TIMELESS	Q9UNS1	1208 aa		32.99	■■■□□ 2.87
TK2-218	ENST00000567357	WDR62	O43379	1518 aa		32.98	■■■□□ 2.87
TK2-218	ENST00000567357	NAIP	Q13075	1403 aa		32.98	■■■□□ 2.87
TK2-218	ENST00000567357	EPRS	P07814	1512 aa	Known RBP	32.98	■■■□□ 2.87
TK2-218	ENST00000567357	UACA	Q9BZF9	1416 aa		32.96	■■■□□ 2.87
TK2-218	ENST00000567357	CDK13	Q14004	1512 aa	Known RBP	32.94	■■■□□ 2.86
TK2-218	ENST00000567357	TCOF1	Q13428	1488 aa	Known RBP	32.89	■■■□□ 2.86
TK2-218	ENST00000567357	PPP1R15A	O75807	674 aa	Predicted RBP	32.88	■■■□□ 2.85
TK2-218	ENST00000567357	ARID3C	A6NKF2	412 aa		32.84	■■■□□ 2.85
TK2-218	ENST00000567357	EIF4G3	O43432	1585 aa	Known RBP	32.82	■■■□□ 2.84
TK2-218	ENST00000567357	KIAA0586	Q9BVV6	1533 aa		32.82	■■■□□ 2.84
TK2-218	ENST00000567357	KIAA0556	O60303	1618 aa		32.81	■■■□□ 2.84
TK2-218	ENST00000567357	TONSL	Q96HA7	1378 aa		32.8	■■■□□ 2.84
TK2-218	ENST00000567357	DISP1	Q96F81	1524 aa		32.8	■■■□□ 2.84
TK2-218	ENST00000567357	GCC2	Q8IWJ2	1684 aa		32.77	■■■□□ 2.84
TK2-218	ENST00000567357	RRP7BP	Q9NSQ0	103 aa		32.77	■■■□□ 2.84
TK2-218	ENST00000567357	GRIN2A	Q12879	1464 aa		32.77	■■■□□ 2.84
TK2-218	ENST00000567357	CHIC2	Q9UKJ5	165 aa		32.76	■■■□□ 2.84
TK2-218	ENST00000567357	MIA2	Q96PC5	1412 aa		32.75	■■■□□ 2.83
TK2-218	ENST00000567357	DDX10	Q13206	875 aa	Known RBP	32.75	■■■□□ 2.83
TK2-218	ENST00000567357	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.72	■■■□□ 2.83
TK2-218	ENST00000567357	AKNA	Q7Z591	1439 aa		32.7	■■■□□ 2.83
TK2-218	ENST00000567357	ERCC6	Q03468	1493 aa		32.69	■■■□□ 2.82
TK2-218	ENST00000567357	KCNH8	Q96L42	1107 aa		32.69	■■■□□ 2.82
TK2-218	ENST00000567357	KDM6B	O15054	1643 aa		32.69	■■■□□ 2.82
TK2-218	ENST00000567357	NUP153	P49790	1475 aa	Known RBP	32.68	■■■□□ 2.82
TK2-218	ENST00000567357	RAPGEF6	Q8TEU7	1601 aa		32.65	■■■□□ 2.82
TK2-218	ENST00000567357	DENND4B	O75064	1496 aa	Predicted RBP	32.64	■■■□□ 2.82
TK2-218	ENST00000567357	KDM5B	Q9UGL1	1544 aa		32.64	■■■□□ 2.81
TK2-218	ENST00000567357	MAGI1	Q96QZ7	1491 aa	Predicted RBP	32.61	■■■□□ 2.81
TK2-218	ENST00000567357	CEP170	Q5SW79	1584 aa		32.58	■■■□□ 2.81
TK2-218	ENST00000567357	TRIM52	Q96A61	297 aa		32.57	■■■□□ 2.8
TK2-218	ENST00000567357	SYNJ2	O15056	1496 aa		32.54	■■■□□ 2.8
TK2-218	ENST00000567357	DAPK1	P53355	1430 aa		32.54	■■■□□ 2.8
TK2-218	ENST00000567357	CHMP7	Q8WUX9	453 aa	Predicted RBP	32.52	■■■□□ 2.8
TK2-218	ENST00000567357	DNMT1	P26358	1616 aa	Known RBP	32.51	■■■□□ 2.79
TK2-218	ENST00000567357	ZNF644	Q9H582	1327 aa	Predicted RBP	32.49	■■■□□ 2.79
TK2-218	ENST00000567357	ABCC5	O15440	1437 aa		32.48	■■■□□ 2.79
TK2-218	ENST00000567357	ROCK1	Q13464	1354 aa		32.47	■■■□□ 2.79
TK2-218	ENST00000567357	MPHOSPH9	Q99550	1183 aa		32.47	■■■□□ 2.79
TK2-218	ENST00000567357	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.47	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms