RNA–Protein interactions for RNA: ENST00000564784.5

NEIL1-206, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 2,019 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-206ENST00000564784 ABCA10Q8WWZ4 1543 aa31.73■■■□□ 2.67
NEIL1-206ENST00000564784 DNAJC5BQ9UF47 199 aa31.71■■■□□ 2.67
NEIL1-206ENST00000564784 RAB3GAP2Q9H2M9 1393 aa31.7■■■□□ 2.67
NEIL1-206ENST00000564784 PCF11O94913 1555 aaKnown RBP31.69■■■□□ 2.66
NEIL1-206ENST00000564784 MAPKBP1O60336 1514 aa31.68■■■□□ 2.66
NEIL1-206ENST00000564784 PHLDB1Q86UU1 1377 aa31.66■■■□□ 2.66
NEIL1-206ENST00000564784 TOPBP1Q92547 1522 aa31.66■■■□□ 2.66
NEIL1-206ENST00000564784 POLA1P09884 1462 aaPredicted RBP31.64■■■□□ 2.66
NEIL1-206ENST00000564784 EFCAB5A4FU69 1503 aa31.63■■■□□ 2.65
NEIL1-206ENST00000564784 CUL7Q14999 1698 aa31.63■■■□□ 2.65
NEIL1-206ENST00000564784 RAD54L2Q9Y4B4 1467 aa31.63■■■□□ 2.65
NEIL1-206ENST00000564784 SETD5Q9C0A6 1442 aa31.63■■■□□ 2.65
NEIL1-206ENST00000564784 ITGAEP38570 1179 aa31.61■■■□□ 2.65
NEIL1-206ENST00000564784 AQRO60306 1485 aaKnown RBP eCLIP31.58■■■□□ 2.65
NEIL1-206ENST00000564784 FYCO1Q9BQS8 1478 aa31.58■■■□□ 2.65
NEIL1-206ENST00000564784 CTTNBP2Q8WZ74 1663 aa31.56■■■□□ 2.64
NEIL1-206ENST00000564784 CASKIN1Q8WXD9 1431 aa31.54■■■□□ 2.64
NEIL1-206ENST00000564784 FHOD3Q2V2M9 1422 aa31.51■■■□□ 2.64
NEIL1-206ENST00000564784 WDR97A6NE52 1622 aa31.51■■■□□ 2.63
NEIL1-206ENST00000564784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.5■■■□□ 2.63
NEIL1-206ENST00000564784 NESP48681 1621 aa31.49■■■□□ 2.63
NEIL1-206ENST00000564784 P3H3Q8IVL6 736 aa31.46■■■□□ 2.63
NEIL1-206ENST00000564784 LAMC3Q9Y6N6 1575 aa31.42■■■□□ 2.62
NEIL1-206ENST00000564784 FAM50AQ14320 339 aaKnown RBP31.39■■■□□ 2.62
NEIL1-206ENST00000564784 URB2Q14146 1524 aaKnown RBP31.38■■■□□ 2.61
NEIL1-206ENST00000564784 SNAPC4Q5SXM2 1469 aa31.37■■■□□ 2.61
NEIL1-206ENST00000564784 ABCA5Q8WWZ7 1642 aa31.37■■■□□ 2.61
NEIL1-206ENST00000564784 FMN1Q68DA7 1419 aa31.36■■■□□ 2.61
NEIL1-206ENST00000564784 SAMD9Q5K651 1589 aa31.33■■■□□ 2.61
NEIL1-206ENST00000564784 TIMELESSQ9UNS1 1208 aa31.32■■■□□ 2.61
NEIL1-206ENST00000564784 ATP1B4Q9UN42 357 aaPredicted RBP31.29■■■□□ 2.6
NEIL1-206ENST00000564784 FGD6Q6ZV73 1430 aa31.27■■■□□ 2.6
NEIL1-206ENST00000564784 SIN3AQ96ST3 1273 aa31.25■■■□□ 2.59
NEIL1-206ENST00000564784 LRRIQ1Q96JM4 1722 aa31.24■■■□□ 2.59
NEIL1-206ENST00000564784 GAPVD1Q14C86 1478 aa31.2■■■□□ 2.59
NEIL1-206ENST00000564784 THOC2Q8NI27 1593 aaKnown RBP31.2■■■□□ 2.58
NEIL1-206ENST00000564784 GRIN2BQ13224 1484 aa31.19■■■□□ 2.58
NEIL1-206ENST00000564784 TDRD9Q8NDG6 1382 aaKnown RBP31.16■■■□□ 2.58
NEIL1-206ENST00000564784 PDS5BQ9NTI5 1447 aa31.13■■■□□ 2.57
NEIL1-206ENST00000564784 MTUS2Q5JR59 1369 aa31.12■■■□□ 2.57
NEIL1-206ENST00000564784 HFM1A2PYH4 1435 aa31.12■■■□□ 2.57
NEIL1-206ENST00000564784 PPP1R15AO75807 674 aaPredicted RBP31.11■■■□□ 2.57
NEIL1-206ENST00000564784 KIF21AQ7Z4S6 1674 aa31.11■■■□□ 2.57
NEIL1-206ENST00000564784 PTPRKQ15262 1439 aa31.1■■■□□ 2.57
NEIL1-206ENST00000564784 PTPN23Q9H3S7 1636 aa31.09■■■□□ 2.57
NEIL1-206ENST00000564784 NCOA2Q15596 1464 aa31.08■■■□□ 2.57
NEIL1-206ENST00000564784 CCDC18Q5T9S5 1454 aa31.08■■■□□ 2.57
NEIL1-206ENST00000564784 SUPT6HQ7KZ85 1726 aaKnown RBP31.07■■■□□ 2.56
NEIL1-206ENST00000564784 TARBP1Q13395 1621 aaKnown RBP31.07■■■□□ 2.56
NEIL1-206ENST00000564784 MYOM3Q5VTT5 1437 aa31.06■■■□□ 2.56
NEIL1-206ENST00000564784 EHBP1L1Q8N3D4 1523 aa31.06■■■□□ 2.56
NEIL1-206ENST00000564784 SUPT16HQ9Y5B9 1047 aaKnown RBP31.05■■■□□ 2.56
NEIL1-206ENST00000564784 UACAQ9BZF9 1416 aa31.05■■■□□ 2.56
NEIL1-206ENST00000564784 ARHGEF11O15085 1522 aa31.04■■■□□ 2.56
NEIL1-206ENST00000564784 KCNH8Q96L42 1107 aa31■■■□□ 2.55
NEIL1-206ENST00000564784 UGGT2Q9NYU1 1516 aa31■■■□□ 2.55
NEIL1-206ENST00000564784 NAIPQ13075 1403 aa31■■■□□ 2.55
NEIL1-206ENST00000564784 DDX10Q13206 875 aaKnown RBP30.98■■■□□ 2.55
NEIL1-206ENST00000564784 MAGI3Q5TCQ9 1506 aa30.94■■■□□ 2.54
NEIL1-206ENST00000564784 PBRM1Q86U86 1689 aa30.92■■■□□ 2.54
NEIL1-206ENST00000564784 TCOF1Q13428 1488 aaKnown RBP30.91■■■□□ 2.54
NEIL1-206ENST00000564784 TONSLQ96HA7 1378 aa30.89■■■□□ 2.54
NEIL1-206ENST00000564784 HECW1Q76N89 1606 aa30.87■■■□□ 2.53
NEIL1-206ENST00000564784 KDM5BQ9UGL1 1544 aa30.84■■■□□ 2.53
NEIL1-206ENST00000564784 GCC2Q8IWJ2 1684 aa30.84■■■□□ 2.53
NEIL1-206ENST00000564784 CCER2I3L3R5 266 aa30.83■■■□□ 2.53
NEIL1-206ENST00000564784 IQGAP2Q13576 1575 aa30.83■■■□□ 2.53
NEIL1-206ENST00000564784 ADAMTS12P58397 1594 aa30.82■■■□□ 2.52
NEIL1-206ENST00000564784 AKNAQ7Z591 1439 aa30.8■■■□□ 2.52
NEIL1-206ENST00000564784 EPRSP07814 1512 aaKnown RBP30.78■■■□□ 2.52
NEIL1-206ENST00000564784 MYT1Q01538 1121 aa30.77■■■□□ 2.52
NEIL1-206ENST00000564784 HIRIP3Q9BW71 556 aaPredicted RBP30.77■■■□□ 2.52
NEIL1-206ENST00000564784 WDR62O43379 1518 aa30.74■■■□□ 2.51
NEIL1-206ENST00000564784 MIA2Q96PC5 1412 aa30.73■■■□□ 2.51
NEIL1-206ENST00000564784 DENND4BO75064 1496 aaPredicted RBP30.72■■■□□ 2.51
NEIL1-206ENST00000564784 ANP32CO43423 234 aa30.7■■■□□ 2.51
NEIL1-206ENST00000564784 MRC2Q9UBG0 1479 aa30.67■■■□□ 2.5
NEIL1-206ENST00000564784 CDK13Q14004 1512 aaKnown RBP30.65■■■□□ 2.5
NEIL1-206ENST00000564784 KDM6BO15054 1643 aa30.65■■■□□ 2.5
NEIL1-206ENST00000564784 RRP7BPQ9NSQ0 103 aa30.63■■■□□ 2.49
NEIL1-206ENST00000564784 CHIC2Q9UKJ5 165 aa30.56■■■□□ 2.48
NEIL1-206ENST00000564784 TSHZ2Q9NRE2 1034 aa30.54■■■□□ 2.48
NEIL1-206ENST00000564784 IFT140Q96RY7 1462 aa30.53■■■□□ 2.48
NEIL1-206ENST00000564784 KIAA0556O60303 1618 aa30.52■■■□□ 2.48
NEIL1-206ENST00000564784 DISP1Q96F81 1524 aa30.51■■■□□ 2.47
NEIL1-206ENST00000564784 KIAA0586Q9BVV6 1533 aa30.51■■■□□ 2.47
NEIL1-206ENST00000564784 ROCK1Q13464 1354 aa30.51■■■□□ 2.47
NEIL1-206ENST00000564784 MPHOSPH9Q99550 1183 aa30.49■■■□□ 2.47
NEIL1-206ENST00000564784 DNMT1P26358 1616 aaKnown RBP30.48■■■□□ 2.47
NEIL1-206ENST00000564784 ZNF608Q9ULD9 1512 aaPredicted RBP30.47■■■□□ 2.47
NEIL1-206ENST00000564784 TRIM52Q96A61 297 aa30.47■■■□□ 2.47
NEIL1-206ENST00000564784 FKBP8Q14318 412 aa30.46■■■□□ 2.47
NEIL1-206ENST00000564784 DAPK1P53355 1430 aa30.46■■■□□ 2.47
NEIL1-206ENST00000564784 NUP153P49790 1475 aaKnown RBP30.43■■■□□ 2.46
NEIL1-206ENST00000564784 HSPA5P11021 654 aaKnown RBP30.43■■■□□ 2.46
NEIL1-206ENST00000564784 WASHC2AQ641Q2 1341 aa30.43■■■□□ 2.46
NEIL1-206ENST00000564784 RAPGEF6Q8TEU7 1601 aa30.42■■■□□ 2.46
NEIL1-206ENST00000564784 ABCC5O15440 1437 aa30.42■■■□□ 2.46
NEIL1-206ENST00000564784 ANKRD30BQ9BXX2 1392 aa30.38■■■□□ 2.45
NEIL1-206ENST00000564784 GRIN2AQ12879 1464 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms