RNA–Protein interactions for RNA: ENST00000564383.1

HERC2-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 471 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-205ENST00000564383 DCBLD2Q96PD2 775 aa11.82□□□□□ -0.52
HERC2-205ENST00000564383 PEG3Q9GZU2 1588 aa11.78□□□□□ -0.52
HERC2-205ENST00000564383 ATAD2BQ9ULI0 1458 aa11.76□□□□□ -0.53
HERC2-205ENST00000564383 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
HERC2-205ENST00000564383 TOP2AP11388 1531 aaKnown RBP11.76□□□□□ -0.53
HERC2-205ENST00000564383 EIF4G1Q04637 1599 aaKnown RBP11.75□□□□□ -0.53
HERC2-205ENST00000564383 ZRANB1Q9UGI0 708 aa11.7□□□□□ -0.54
HERC2-205ENST00000564383 SMARCA2P51531 1590 aa11.69□□□□□ -0.54
HERC2-205ENST00000564383 CCDC88BA6NC98 1476 aa11.67□□□□□ -0.54
HERC2-205ENST00000564383 NCAPD3P42695 1498 aa11.67□□□□□ -0.54
HERC2-205ENST00000564383 BAZ1BQ9UIG0 1483 aaKnown RBP11.65□□□□□ -0.54
HERC2-205ENST00000564383 OTUD5Q96G74 571 aa11.65□□□□□ -0.54
HERC2-205ENST00000564383 GALR2O43603 387 aaPredicted RBP11.64□□□□□ -0.55
HERC2-205ENST00000564383 CREBZFQ9NS37 354 aa11.62□□□□□ -0.55
HERC2-205ENST00000564383 HMGXB3Q12766 1538 aa11.6□□□□□ -0.55
HERC2-205ENST00000564383 POTEB2H3BUK9 544 aa11.6□□□□□ -0.55
HERC2-205ENST00000564383 CC2D2AQ9P2K1 1620 aa11.57□□□□□ -0.56
HERC2-205ENST00000564383 POTEMA6NI47 508 aa11.56□□□□□ -0.56
HERC2-205ENST00000564383 STAG3Q9UJ98 1225 aa11.53□□□□□ -0.56
HERC2-205ENST00000564383 POTEGQ6S5H5 508 aa11.51□□□□□ -0.57
HERC2-205ENST00000564383 PHF12Q96QT6 1004 aa11.5□□□□□ -0.57
HERC2-205ENST00000564383 PAK3O75914 559 aaPredicted RBP11.49□□□□□ -0.57
HERC2-205ENST00000564383 PELP1Q8IZL8 1130 aaKnown RBP11.46□□□□□ -0.57
HERC2-205ENST00000564383 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
HERC2-205ENST00000564383 CFTRP13569 1480 aa11.39□□□□□ -0.59
HERC2-205ENST00000564383 ABCC8Q09428 1581 aa11.39□□□□□ -0.59
HERC2-205ENST00000564383 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
HERC2-205ENST00000564383 NPM1P06748 294 aaKnown RBP eCLIP11.38□□□□□ -0.59
HERC2-205ENST00000564383 METRNQ9UJH8 293 aa11.38□□□□□ -0.59
HERC2-205ENST00000564383 ASTLQ6HA08 431 aaPredicted RBP11.37□□□□□ -0.59
HERC2-205ENST00000564383 MNX1P50219 401 aaPredicted RBP11.36□□□□□ -0.59
HERC2-205ENST00000564383 CADPSQ9ULU8 1353 aa11.36□□□□□ -0.59
HERC2-205ENST00000564383 POTEJP0CG39 1038 aa11.35□□□□□ -0.59
HERC2-205ENST00000564383 SLC39A7Q92504 469 aa11.34□□□□□ -0.59
HERC2-205ENST00000564383 ATMINO43313 823 aaPredicted RBP11.33□□□□□ -0.6
HERC2-205ENST00000564383 C7P10643 843 aa11.33□□□□□ -0.6
HERC2-205ENST00000564383 MS4A3Q96HJ5 214 aa11.33□□□□□ -0.6
HERC2-205ENST00000564383 WRNQ14191 1432 aaPredicted RBP eCLIP11.32□□□□□ -0.6
HERC2-205ENST00000564383 SPDYE4A6NLX3 237 aa11.31□□□□□ -0.6
HERC2-205ENST00000564383 MAMSTRQ6ZN01 415 aa11.3□□□□□ -0.6
HERC2-205ENST00000564383 LCE2DQ5TA82 110 aaPredicted RBP11.29□□□□□ -0.6
HERC2-205ENST00000564383 SYNJ1O43426 1573 aa11.28□□□□□ -0.6
HERC2-205ENST00000564383 NESP48681 1621 aa11.27□□□□□ -0.6
HERC2-205ENST00000564383 FAM9AQ8IZU1 332 aaPredicted RBP11.23□□□□□ -0.61
HERC2-205ENST00000564383 CSRNP3Q8WYN3 585 aa11.23□□□□□ -0.61
HERC2-205ENST00000564383 CUX1P39880 1505 aa11.23□□□□□ -0.61
HERC2-205ENST00000564383 LOC105371045A0A1W2PR82 267 aa11.22□□□□□ -0.61
HERC2-205ENST00000564383 SOGA1O94964 1423 aa11.22□□□□□ -0.61
HERC2-205ENST00000564383 FANCD2Q9BXW9 1451 aa11.22□□□□□ -0.61
HERC2-205ENST00000564383 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
HERC2-205ENST00000564383 SCUBE2Q9NQ36 999 aa11.21□□□□□ -0.61
HERC2-205ENST00000564383 TOP2BQ02880 1626 aa11.2□□□□□ -0.62
HERC2-205ENST00000564383 LAMC3Q9Y6N6 1575 aa11.2□□□□□ -0.62
HERC2-205ENST00000564383 ATN1P54259 1190 aaPredicted RBP11.19□□□□□ -0.62
HERC2-205ENST00000564383 RUSC2Q8N2Y8 1516 aa11.19□□□□□ -0.62
HERC2-205ENST00000564383 BIVM-ERCC5R4GMW8 1640 aa11.17□□□□□ -0.62
HERC2-205ENST00000564383 PRDM2Q13029 1718 aa11.17□□□□□ -0.62
HERC2-205ENST00000564383 TSPYL2Q9H2G4 693 aaPredicted RBP11.15□□□□□ -0.62
HERC2-205ENST00000564383 CCDC61Q9Y6R9 512 aa11.14□□□□□ -0.63
HERC2-205ENST00000564383 PDS5BQ9NTI5 1447 aa11.14□□□□□ -0.63
HERC2-205ENST00000564383 POTEFA5A3E0 1075 aa11.13□□□□□ -0.63
HERC2-205ENST00000564383 CEP164Q9UPV0 1460 aa11.12□□□□□ -0.63
HERC2-205ENST00000564383 EEA1Q15075 1411 aa11.12□□□□□ -0.63
HERC2-205ENST00000564383 BMP2KQ9NSY1 1161 aaPredicted RBP11.11□□□□□ -0.63
HERC2-205ENST00000564383 URB2Q14146 1524 aaKnown RBP11.1□□□□□ -0.63
HERC2-205ENST00000564383 KIF12Q96FN5 646 aa11.1□□□□□ -0.63
HERC2-205ENST00000564383 TOPBP1Q92547 1522 aa11.09□□□□□ -0.63
HERC2-205ENST00000564383 FGD5Q6ZNL6 1462 aa11.09□□□□□ -0.63
HERC2-205ENST00000564383 DNMBPQ6XZF7 1577 aa11.08□□□□□ -0.64
HERC2-205ENST00000564383 TRPC6Q9Y210 931 aa11.07□□□□□ -0.64
HERC2-205ENST00000564383 EHMT2Q96KQ7 1210 aa11.06□□□□□ -0.64
HERC2-205ENST00000564383 POLA1P09884 1462 aaPredicted RBP11.06□□□□□ -0.64
HERC2-205ENST00000564383 TIE1P35590 1138 aa11.04□□□□□ -0.64
HERC2-205ENST00000564383 KIF21AQ7Z4S6 1674 aa11.04□□□□□ -0.64
HERC2-205ENST00000564383 KIF27Q86VH2 1401 aa11.03□□□□□ -0.64
HERC2-205ENST00000564383 RAD54L2Q9Y4B4 1467 aa11.03□□□□□ -0.64
HERC2-205ENST00000564383 CUX2O14529 1486 aa11.01□□□□□ -0.65
HERC2-205ENST00000564383 MRC2Q9UBG0 1479 aa11.01□□□□□ -0.65
HERC2-205ENST00000564383 MAP3K13O43283 966 aa11.01□□□□□ -0.65
HERC2-205ENST00000564383 CDAN1Q8IWY9 1227 aa11.01□□□□□ -0.65
HERC2-205ENST00000564383 COLQQ9Y215 455 aaPredicted RBP11.01□□□□□ -0.65
HERC2-205ENST00000564383 PRXQ9BXM0 1461 aa11□□□□□ -0.65
HERC2-205ENST00000564383 ABCA10Q8WWZ4 1543 aa10.99□□□□□ -0.65
HERC2-205ENST00000564383 PROM2Q8N271 834 aa10.98□□□□□ -0.65
HERC2-205ENST00000564383 IGF1RP08069 1367 aa10.98□□□□□ -0.65
HERC2-205ENST00000564383 GOLGA3Q08378 1498 aa10.98□□□□□ -0.65
HERC2-205ENST00000564383 RAPGEF2Q9Y4G8 1499 aa10.98□□□□□ -0.65
HERC2-205ENST00000564383 TTLL13PA6NNM8 815 aa10.97□□□□□ -0.65
HERC2-205ENST00000564383 SEC24BO95487 1268 aa10.97□□□□□ -0.65
HERC2-205ENST00000564383 TNIKQ9UKE5 1360 aa10.97□□□□□ -0.65
HERC2-205ENST00000564383 KIF21BO75037 1637 aa10.97□□□□□ -0.65
HERC2-205ENST00000564383 WDR62O43379 1518 aa10.96□□□□□ -0.65
HERC2-205ENST00000564383 ERCC6Q03468 1493 aa10.94□□□□□ -0.66
HERC2-205ENST00000564383 RASEFQ8IZ41 740 aa10.93□□□□□ -0.66
HERC2-205ENST00000564383 TDRD9Q8NDG6 1382 aaKnown RBP10.92□□□□□ -0.66
HERC2-205ENST00000564383 TARBP1Q13395 1621 aaKnown RBP10.92□□□□□ -0.66
HERC2-205ENST00000564383 IER5LQ5T953 404 aa10.92□□□□□ -0.66
HERC2-205ENST00000564383 THOC2Q8NI27 1593 aaKnown RBP10.91□□□□□ -0.66
HERC2-205ENST00000564383 ERICH3Q5RHP9 1530 aa10.91□□□□□ -0.66
HERC2-205ENST00000564383 UBTFP17480 764 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms