RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 PRKCSHP14314 528 aaPredicted RBP5.78□□□□□ -1.48
CHD9-209ENST00000564255 RNF25Q96BH1 459 aaPredicted RBP5.77□□□□□ -1.49
CHD9-209ENST00000564255 SPDYE1Q8NFV5 336 aaPredicted RBP5.75□□□□□ -1.49
CHD9-209ENST00000564255 CREBZFQ9NS37 354 aa5.75□□□□□ -1.49
CHD9-209ENST00000564255 AKT1S1Q96B36 256 aa5.75□□□□□ -1.49
CHD9-209ENST00000564255 MNX1P50219 401 aaPredicted RBP5.74□□□□□ -1.49
CHD9-209ENST00000564255 CHRM1P11229 460 aaPredicted RBP5.73□□□□□ -1.49
CHD9-209ENST00000564255 RIOK3O14730 519 aaKnown RBP5.73□□□□□ -1.49
CHD9-209ENST00000564255 NKX1-1Q15270 411 aaPredicted RBP5.72□□□□□ -1.49
CHD9-209ENST00000564255 DCAF8Q5TAQ9 597 aa5.72□□□□□ -1.49
CHD9-209ENST00000564255 SGIP1Q9BQI5 828 aa5.72□□□□□ -1.49
CHD9-209ENST00000564255 RBM42Q9BTD8 480 aaKnown RBP5.72□□□□□ -1.49
CHD9-209ENST00000564255 TPRNQ4KMQ1 711 aa5.71□□□□□ -1.5
CHD9-209ENST00000564255 VGFO15240 615 aaPredicted RBP5.69□□□□□ -1.5
CHD9-209ENST00000564255 GTPBP6O43824 516 aaPredicted RBP5.69□□□□□ -1.5
CHD9-209ENST00000564255 FAM212AQ96EL1 285 aa5.69□□□□□ -1.5
CHD9-209ENST00000564255 PRR29P0C7W0 189 aa5.69□□□□□ -1.5
CHD9-209ENST00000564255 REM2Q8IYK8 340 aaPredicted RBP5.69□□□□□ -1.5
CHD9-209ENST00000564255 RASEFQ8IZ41 740 aa5.67□□□□□ -1.5
CHD9-209ENST00000564255 CLEC11AQ9Y240 323 aa5.66□□□□□ -1.5
CHD9-209ENST00000564255 STK25O00506 426 aa5.64□□□□□ -1.51
CHD9-209ENST00000564255 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.63□□□□□ -1.51
CHD9-209ENST00000564255 NBR1Q14596 966 aa5.63□□□□□ -1.51
CHD9-209ENST00000564255 ZFP91Q96JP5 570 aaPredicted RBP5.63□□□□□ -1.51
CHD9-209ENST00000564255 PITPNM1O00562 1244 aa5.61□□□□□ -1.51
CHD9-209ENST00000564255 BCL11BQ9C0K0 894 aaPredicted RBP5.61□□□□□ -1.51
CHD9-209ENST00000564255 RYDENQ9NUL5 291 aaKnown RBP5.61□□□□□ -1.51
CHD9-209ENST00000564255 STK24Q9Y6E0 443 aa5.61□□□□□ -1.51
CHD9-209ENST00000564255 PYGBP11216 843 aa5.6□□□□□ -1.51
CHD9-209ENST00000564255 ZNF467Q7Z7K2 595 aaPredicted RBP5.55□□□□□ -1.52
CHD9-209ENST00000564255 PDAP1Q13442 181 aaKnown RBP5.53□□□□□ -1.52
CHD9-209ENST00000564255 FARP1Q9Y4F1 1045 aaPredicted RBP5.53□□□□□ -1.52
CHD9-209ENST00000564255 CHADLQ6NUI6 762 aa5.52□□□□□ -1.53
CHD9-209ENST00000564255 CADPS2Q86UW7 1296 aa5.52□□□□□ -1.53
CHD9-209ENST00000564255 P3H3Q8IVL6 736 aa5.51□□□□□ -1.53
CHD9-209ENST00000564255 ZNF579Q8NAF0 562 aaKnown RBP5.51□□□□□ -1.53
CHD9-209ENST00000564255 TSPYL2Q9H2G4 693 aaPredicted RBP5.51□□□□□ -1.53
CHD9-209ENST00000564255 CCDC61Q9Y6R9 512 aa5.5□□□□□ -1.53
CHD9-209ENST00000564255 PCDHB8Q9UN66 801 aa5.49□□□□□ -1.53
CHD9-209ENST00000564255 PCDHB13Q9Y5F0 798 aa5.49□□□□□ -1.53
CHD9-209ENST00000564255 PSEN1P49768 467 aa5.49□□□□□ -1.53
CHD9-209ENST00000564255 MFRPQ9BY79 579 aa5.49□□□□□ -1.53
CHD9-209ENST00000564255 FXR2P51116 673 aaKnown RBP eCLIP5.47□□□□□ -1.531e-6■■■□□ 15.8
CHD9-209ENST00000564255 KCNV2Q8TDN2 545 aa5.47□□□□□ -1.53
CHD9-209ENST00000564255 WDR70Q9NW82 654 aa5.46□□□□□ -1.54
CHD9-209ENST00000564255 PRKAR2AP13861 404 aaKnown RBP5.45□□□□□ -1.54
CHD9-209ENST00000564255 FBXO22Q8NEZ5 403 aa5.45□□□□□ -1.54
CHD9-209ENST00000564255 SP7Q8TDD2 431 aaPredicted RBP5.45□□□□□ -1.54
CHD9-209ENST00000564255 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.45□□□□□ -1.54
CHD9-209ENST00000564255 SOX12O15370 315 aa5.44□□□□□ -1.54
CHD9-209ENST00000564255 CHRDL2Q6WN34 429 aa5.44□□□□□ -1.54
CHD9-209ENST00000564255 PPP1R37O75864 691 aa5.43□□□□□ -1.54
CHD9-209ENST00000564255 IFNL1Q8IU54 200 aa5.43□□□□□ -1.54
CHD9-209ENST00000564255 KIF12Q96FN5 646 aa5.43□□□□□ -1.54
CHD9-209ENST00000564255 NLRP6P59044 892 aa5.42□□□□□ -1.54
CHD9-209ENST00000564255 LMOD2Q6P5Q4 547 aa5.42□□□□□ -1.54
CHD9-209ENST00000564255 EFCAB3Q8N7B9 438 aa5.42□□□□□ -1.54
CHD9-209ENST00000564255 ARHGEF1Q92888 912 aaKnown RBP5.41□□□□□ -1.54
CHD9-209ENST00000564255 MAP3K13O43283 966 aa5.41□□□□□ -1.54
CHD9-209ENST00000564255 TMEM132AQ24JP5 1023 aa5.41□□□□□ -1.54
CHD9-209ENST00000564255 PAK3O75914 559 aaPredicted RBP5.41□□□□□ -1.54
CHD9-209ENST00000564255 PHF8Q9UPP1 1060 aa5.4□□□□□ -1.54
CHD9-209ENST00000564255 CABP2Q9NPB3 220 aa5.39□□□□□ -1.55
CHD9-209ENST00000564255 GTF3C3Q9Y5Q9 886 aa5.39□□□□□ -1.55
CHD9-209ENST00000564255 MFSD10Q14728 455 aa5.38□□□□□ -1.55
CHD9-209ENST00000564255 E2F4Q16254 413 aa5.38□□□□□ -1.55
CHD9-209ENST00000564255 PIP4P2Q8N4L2 257 aa5.38□□□□□ -1.55
CHD9-209ENST00000564255 TESPA1A2RU30 521 aaPredicted RBP5.37□□□□□ -1.55
CHD9-209ENST00000564255 NCKAP5LQ9HCH0 1330 aa5.37□□□□□ -1.55
CHD9-209ENST00000564255 MS4A4AQ96JQ5 239 aa5.37□□□□□ -1.55
CHD9-209ENST00000564255 TIMELESSQ9UNS1 1208 aa5.37□□□□□ -1.55
CHD9-209ENST00000564255 ARIH1Q9Y4X5 557 aaPredicted RBP5.36□□□□□ -1.55
CHD9-209ENST00000564255 TULP1O00294 542 aaPredicted RBP5.35□□□□□ -1.55
CHD9-209ENST00000564255 ZC3H15Q8WU90 426 aaKnown RBP5.35□□□□□ -1.55
CHD9-209ENST00000564255 PDE4AP27815 886 aa5.34□□□□□ -1.55
CHD9-209ENST00000564255 CRISPLD2Q9H0B8 497 aa5.34□□□□□ -1.55
CHD9-209ENST00000564255 ZRANB1Q9UGI0 708 aa5.34□□□□□ -1.55
CHD9-209ENST00000564255 ERICH6Q7L0X2 663 aa5.34□□□□□ -1.56
CHD9-209ENST00000564255 SEMA3EO15041 775 aa5.33□□□□□ -1.56
CHD9-209ENST00000564255 CAMK2BQ13554 666 aa5.33□□□□□ -1.56
CHD9-209ENST00000564255 PHF12Q96QT6 1004 aa5.33□□□□□ -1.56
CHD9-209ENST00000564255 BRPF1P55201 1214 aaPredicted RBP5.32□□□□□ -1.56
CHD9-209ENST00000564255 CD44P16070 742 aaKnown RBP5.32□□□□□ -1.56
CHD9-209ENST00000564255 LARP6Q9BRS8 491 aaKnown RBP5.32□□□□□ -1.56
CHD9-209ENST00000564255 ILDR1Q86SU0 546 aaPredicted RBP5.31□□□□□ -1.56
CHD9-209ENST00000564255 ZMYND10O75800 440 aa5.3□□□□□ -1.56
CHD9-209ENST00000564255 DDX27Q96GQ7 796 aaKnown RBP5.3□□□□□ -1.56
CHD9-209ENST00000564255 TMEM106CQ9BVX2 250 aa5.3□□□□□ -1.56
CHD9-209ENST00000564255 SMYD5Q6GMV2 418 aa5.3□□□□□ -1.56
CHD9-209ENST00000564255 SLC24A3Q9HC58 644 aa5.29□□□□□ -1.56
CHD9-209ENST00000564255 TRPC6Q9Y210 931 aa5.29□□□□□ -1.56
CHD9-209ENST00000564255 C19orf67A6NJJ6 358 aa5.28□□□□□ -1.56
CHD9-209ENST00000564255 MS4A3Q96HJ5 214 aa5.28□□□□□ -1.56
CHD9-209ENST00000564255 TIE1P35590 1138 aa5.27□□□□□ -1.57
CHD9-209ENST00000564255 GOLGA2Q08379 1002 aa5.27□□□□□ -1.57
CHD9-209ENST00000564255 MKRN3Q13064 507 aaKnown RBP5.26□□□□□ -1.57
CHD9-209ENST00000564255 BARGINQ6ZT62 677 aa5.26□□□□□ -1.57
CHD9-209ENST00000564255 GPHNQ9NQX3 736 aaPredicted RBP5.25□□□□□ -1.57
CHD9-209ENST00000564255 TTLL13PA6NNM8 815 aa5.24□□□□□ -1.57
CHD9-209ENST00000564255 NEUROD2Q15784 382 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms