RNA–Protein interactions for RNA: ENST00000562570.1

AC009041.2-203, humanhuman

TSL 1 (best)

Gene AC009041.2, Length 3,222 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-203ENST00000562570 PDS5BQ9NTI5 1447 aa25.73■■□□□ 1.71
AC009041.2-203ENST00000562570 FHOD3Q2V2M9 1422 aa25.72■■□□□ 1.71
AC009041.2-203ENST00000562570 FBLN2P98095 1184 aa25.72■■□□□ 1.71
AC009041.2-203ENST00000562570 ARHGAP35Q9NRY4 1499 aa25.71■■□□□ 1.71
AC009041.2-203ENST00000562570 CCNB3Q8WWL7 1395 aa25.71■■□□□ 1.71
AC009041.2-203ENST00000562570 DHX57Q6P158 1386 aaKnown RBP25.7■■□□□ 1.71
AC009041.2-203ENST00000562570 DDX10Q13206 875 aaKnown RBP25.69■■□□□ 1.7
AC009041.2-203ENST00000562570 ERCC6Q03468 1493 aa25.65■■□□□ 1.7
AC009041.2-203ENST00000562570 TOPBP1Q92547 1522 aa25.62■■□□□ 1.69
AC009041.2-203ENST00000562570 URB2Q14146 1524 aaKnown RBP25.61■■□□□ 1.69
AC009041.2-203ENST00000562570 RAB3GAP2Q9H2M9 1393 aa25.61■■□□□ 1.69
AC009041.2-203ENST00000562570 RRP7BPQ9NSQ0 103 aa25.59■■□□□ 1.69
AC009041.2-203ENST00000562570 BCANQ96GW7 911 aa25.59■■□□□ 1.69
AC009041.2-203ENST00000562570 POLA1P09884 1462 aaPredicted RBP25.58■■□□□ 1.68
AC009041.2-203ENST00000562570 PHLDB1Q86UU1 1377 aa25.57■■□□□ 1.68
AC009041.2-203ENST00000562570 LAMC3Q9Y6N6 1575 aa25.57■■□□□ 1.68
AC009041.2-203ENST00000562570 TRIM52Q96A61 297 aa25.56■■□□□ 1.68
AC009041.2-203ENST00000562570 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
AC009041.2-203ENST00000562570 KIF21AQ7Z4S6 1674 aa25.51■■□□□ 1.67
AC009041.2-203ENST00000562570 FOXD1Q16676 465 aa25.48■■□□□ 1.67
AC009041.2-203ENST00000562570 MTUS2Q5JR59 1369 aa25.46■■□□□ 1.67
AC009041.2-203ENST00000562570 SENP3-EIF4A1A0A087X0R7 540 aa25.43■■□□□ 1.66
AC009041.2-203ENST00000562570 AQRO60306 1485 aaKnown RBP eCLIP25.43■■□□□ 1.66
AC009041.2-203ENST00000562570 DNMBPQ6XZF7 1577 aa25.43■■□□□ 1.66
AC009041.2-203ENST00000562570 ERICH3Q5RHP9 1530 aa25.41■■□□□ 1.66
AC009041.2-203ENST00000562570 POLR3GLQ9BT43 218 aa25.41■■□□□ 1.66
AC009041.2-203ENST00000562570 ZNF777Q9ULD5 760 aaPredicted RBP25.4■■□□□ 1.66
AC009041.2-203ENST00000562570 PRDM2Q13029 1718 aa25.39■■□□□ 1.65
AC009041.2-203ENST00000562570 ZNF326Q5BKZ1 582 aaKnown RBP25.32■■□□□ 1.64
AC009041.2-203ENST00000562570 MRC2Q9UBG0 1479 aa25.3■■□□□ 1.64
AC009041.2-203ENST00000562570 SETD5Q9C0A6 1442 aa25.29■■□□□ 1.64
AC009041.2-203ENST00000562570 ZNF608Q9ULD9 1512 aaPredicted RBP25.28■■□□□ 1.64
AC009041.2-203ENST00000562570 RRBP1Q9P2E9 1410 aaKnown RBP25.27■■□□□ 1.64
AC009041.2-203ENST00000562570 LRRC9Q6ZRR7 1453 aa25.27■■□□□ 1.64
AC009041.2-203ENST00000562570 GAPVD1Q14C86 1478 aa25.25■■□□□ 1.63
AC009041.2-203ENST00000562570 ABCA10Q8WWZ4 1543 aa25.23■■□□□ 1.63
AC009041.2-203ENST00000562570 FHAD1B1AJZ9 1412 aa25.2■■□□□ 1.62
AC009041.2-203ENST00000562570 TONSLQ96HA7 1378 aa25.19■■□□□ 1.62
AC009041.2-203ENST00000562570 ZNF644Q9H582 1327 aaPredicted RBP25.17■■□□□ 1.62
AC009041.2-203ENST00000562570 PCF11O94913 1555 aaKnown RBP25.15■■□□□ 1.62
AC009041.2-203ENST00000562570 TIAM1Q13009 1591 aa25.14■■□□□ 1.61
AC009041.2-203ENST00000562570 CHMP7Q8WUX9 453 aaPredicted RBP25.14■■□□□ 1.61
AC009041.2-203ENST00000562570 IRX6P78412 446 aaPredicted RBP25.12■■□□□ 1.61
AC009041.2-203ENST00000562570 CLSPNQ9HAW4 1339 aa25.1■■□□□ 1.61
AC009041.2-203ENST00000562570 PPP1R15AO75807 674 aaPredicted RBP25.06■■□□□ 1.6
AC009041.2-203ENST00000562570 FKBP8Q14318 412 aa25.05■■□□□ 1.6
AC009041.2-203ENST00000562570 ANP32CO43423 234 aa25.05■■□□□ 1.6
AC009041.2-203ENST00000562570 WDR97A6NE52 1622 aa25.04■■□□□ 1.6
AC009041.2-203ENST00000562570 PTPRKQ15262 1439 aa25.03■■□□□ 1.6
AC009041.2-203ENST00000562570 SUPT16HQ9Y5B9 1047 aaKnown RBP25.03■■□□□ 1.6
AC009041.2-203ENST00000562570 MAPKBP1O60336 1514 aa24.99■■□□□ 1.59
AC009041.2-203ENST00000562570 TARBP1Q13395 1621 aaKnown RBP24.98■■□□□ 1.59
AC009041.2-203ENST00000562570 FGD6Q6ZV73 1430 aa24.97■■□□□ 1.59
AC009041.2-203ENST00000562570 FMN1Q68DA7 1419 aa24.96■■□□□ 1.59
AC009041.2-203ENST00000562570 IFT140Q96RY7 1462 aa24.95■■□□□ 1.59
AC009041.2-203ENST00000562570 WDR62O43379 1518 aa24.95■■□□□ 1.58
AC009041.2-203ENST00000562570 SLC4A1APQ9BWU0 796 aaKnown RBP24.93■■□□□ 1.58
AC009041.2-203ENST00000562570 SNAPC4Q5SXM2 1469 aa24.93■■□□□ 1.58
AC009041.2-203ENST00000562570 CASKIN1Q8WXD9 1431 aa24.92■■□□□ 1.58
AC009041.2-203ENST00000562570 FAM9BQ8IZU0 186 aa24.91■■□□□ 1.58
AC009041.2-203ENST00000562570 KDM2AQ9Y2K7 1162 aa24.91■■□□□ 1.58
AC009041.2-203ENST00000562570 HNRNPUQ00839 825 aaKnown RBP eCLIP24.9■■□□□ 1.58
AC009041.2-203ENST00000562570 GRIN2BQ13224 1484 aa24.9■■□□□ 1.58
AC009041.2-203ENST00000562570 NCOA2Q15596 1464 aa24.89■■□□□ 1.58
AC009041.2-203ENST00000562570 CDK13Q14004 1512 aaKnown RBP24.88■■□□□ 1.57
AC009041.2-203ENST00000562570 CCDC18Q5T9S5 1454 aa24.88■■□□□ 1.57
AC009041.2-203ENST00000562570 ABCA5Q8WWZ7 1642 aa24.87■■□□□ 1.57
AC009041.2-203ENST00000562570 L3MBTL2Q969R5 705 aa24.87■■□□□ 1.57
AC009041.2-203ENST00000562570 THOC2Q8NI27 1593 aaKnown RBP24.87■■□□□ 1.57
AC009041.2-203ENST00000562570 MPHOSPH9Q99550 1183 aa24.87■■□□□ 1.57
AC009041.2-203ENST00000562570 HSPA5P11021 654 aaKnown RBP24.86■■□□□ 1.57
AC009041.2-203ENST00000562570 CFDP1Q9UEE9 299 aaPredicted RBP24.84■■□□□ 1.57
AC009041.2-203ENST00000562570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.8■■□□□ 1.56
AC009041.2-203ENST00000562570 FYCO1Q9BQS8 1478 aa24.8■■□□□ 1.56
AC009041.2-203ENST00000562570 NEFLP07196 543 aa24.8■■□□□ 1.56
AC009041.2-203ENST00000562570 EIF4G3O43432 1585 aaKnown RBP24.78■■□□□ 1.56
AC009041.2-203ENST00000562570 CCDC184Q52MB2 194 aa24.78■■□□□ 1.56
AC009041.2-203ENST00000562570 MYOM3Q5VTT5 1437 aa24.76■■□□□ 1.55
AC009041.2-203ENST00000562570 SALL2Q9Y467 1007 aaPredicted RBP24.74■■□□□ 1.55
AC009041.2-203ENST00000562570 C11orf95C9JLR9 678 aaPredicted RBP24.73■■□□□ 1.55
AC009041.2-203ENST00000562570 CUL7Q14999 1698 aa24.73■■□□□ 1.55
AC009041.2-203ENST00000562570 RGL3Q3MIN7 710 aa24.73■■□□□ 1.55
AC009041.2-203ENST00000562570 NAIPQ13075 1403 aa24.72■■□□□ 1.55
AC009041.2-203ENST00000562570 CDK11AQ9UQ88 783 aaPredicted RBP24.71■■□□□ 1.55
AC009041.2-203ENST00000562570 JPH4Q96JJ6 628 aa24.71■■□□□ 1.55
AC009041.2-203ENST00000562570 EIF4G2P78344 907 aaKnown RBP eCLIP24.71■■□□□ 1.55
AC009041.2-203ENST00000562570 PBRM1Q86U86 1689 aa24.7■■□□□ 1.54
AC009041.2-203ENST00000562570 SENP3Q9H4L4 574 aaPredicted RBP24.69■■□□□ 1.54
AC009041.2-203ENST00000562570 HNRNPMP52272 730 aaKnown RBP eCLIP24.68■■□□□ 1.54
AC009041.2-203ENST00000562570 NBPF8Q3BBV2 869 aa24.67■■□□□ 1.54
AC009041.2-203ENST00000562570 MYT1LQ9UL68 1186 aa24.67■■□□□ 1.54
AC009041.2-203ENST00000562570 MAGI3Q5TCQ9 1506 aa24.66■■□□□ 1.54
AC009041.2-203ENST00000562570 PRG4Q92954 1404 aaPredicted RBP24.66■■□□□ 1.54
AC009041.2-203ENST00000562570 WASHC2AQ641Q2 1341 aa24.65■■□□□ 1.54
AC009041.2-203ENST00000562570 ADAMTS12P58397 1594 aa24.64■■□□□ 1.54
AC009041.2-203ENST00000562570 GRIN2AQ12879 1464 aa24.64■■□□□ 1.53
AC009041.2-203ENST00000562570 PKD2Q13563 968 aa24.63■■□□□ 1.53
AC009041.2-203ENST00000562570 MRS2Q9HD23 443 aa24.62■■□□□ 1.53
AC009041.2-203ENST00000562570 PLEKHD1A6NEE1 506 aa24.61■■□□□ 1.53
AC009041.2-203ENST00000562570 MYT1Q01538 1121 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms