RNA–Protein interactions for RNA: ENST00000562570.1

AC009041.2-203, humanhuman

TSL 1 (best)

Gene AC009041.2, Length 3,222 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-203ENST00000562570 NISCHQ9Y2I1 1504 aa35.7■■■■□ 3.31
AC009041.2-203ENST00000562570 SHROOM4Q9ULL8 1493 aa32.18■■■□□ 2.74
AC009041.2-203ENST00000562570 DCAF8L2P0C7V8 631 aa31.98■■■□□ 2.71
AC009041.2-203ENST00000562570 SUPT5HO00267 1087 aaKnown RBP31.57■■■□□ 2.64
AC009041.2-203ENST00000562570 CCDC180Q9P1Z9 1646 aa30.45■■■□□ 2.46
AC009041.2-203ENST00000562570 ABCC9O60706 1549 aa30.04■■■□□ 2.4
AC009041.2-203ENST00000562570 EHMT2Q96KQ7 1210 aa29.94■■■□□ 2.38
AC009041.2-203ENST00000562570 ZCCHC6Q5VYS8 1495 aaKnown RBP29.91■■■□□ 2.38
AC009041.2-203ENST00000562570 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
AC009041.2-203ENST00000562570 LOC105371045A0A1W2PR82 267 aa29.59■■■□□ 2.33
AC009041.2-203ENST00000562570 FAM9AQ8IZU1 332 aaPredicted RBP29.49■■■□□ 2.31
AC009041.2-203ENST00000562570 PCGF6Q9BYE7 350 aa29.45■■■□□ 2.3
AC009041.2-203ENST00000562570 MYO15BQ96JP2 1530 aa29.43■■■□□ 2.3
AC009041.2-203ENST00000562570 SCRIBQ14160 1630 aa28.99■■■□□ 2.23
AC009041.2-203ENST00000562570 PPARGC1BQ86YN6 1023 aaKnown RBP28.93■■■□□ 2.22
AC009041.2-203ENST00000562570 DCAF1Q9Y4B6 1507 aa28.91■■■□□ 2.22
AC009041.2-203ENST00000562570 TRIM41Q8WV44 630 aa28.9■■■□□ 2.22
AC009041.2-203ENST00000562570 PABPN1Q86U42 306 aaKnown RBP eCLIP28.78■■■□□ 2.2
AC009041.2-203ENST00000562570 TTBK1Q5TCY1 1321 aaPredicted RBP28.77■■■□□ 2.2
AC009041.2-203ENST00000562570 NACADO15069 1562 aa28.63■■■□□ 2.17
AC009041.2-203ENST00000562570 HRCP23327 699 aa28.55■■■□□ 2.16
AC009041.2-203ENST00000562570 RB1CC1Q8TDY2 1594 aa28.52■■■□□ 2.16
AC009041.2-203ENST00000562570 RSF1Q96T23 1441 aaPredicted RBP28.49■■■□□ 2.15
AC009041.2-203ENST00000562570 CECR2Q9BXF3 1484 aa28.44■■■□□ 2.14
AC009041.2-203ENST00000562570 RANGAP1P46060 587 aaPredicted RBP28.24■■■□□ 2.11
AC009041.2-203ENST00000562570 TRIM26Q12899 539 aaPredicted RBP28.12■■■□□ 2.09
AC009041.2-203ENST00000562570 MROH2BQ7Z745 1585 aa28.05■■■□□ 2.08
AC009041.2-203ENST00000562570 UNC13AQ9UPW8 1703 aa27.87■■■□□ 2.05
AC009041.2-203ENST00000562570 WIZO95785 1651 aa27.86■■■□□ 2.05
AC009041.2-203ENST00000562570 UBTFP17480 764 aaKnown RBP27.84■■■□□ 2.05
AC009041.2-203ENST00000562570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.81■■■□□ 2.04
AC009041.2-203ENST00000562570 BICRAQ9NZM4 1560 aa27.74■■■□□ 2.03
AC009041.2-203ENST00000562570 CCER1Q8TC90 406 aaPredicted RBP27.58■■■□□ 2.01
AC009041.2-203ENST00000562570 ABCC8Q09428 1581 aa27.58■■■□□ 2
AC009041.2-203ENST00000562570 BAZ1AQ9NRL2 1556 aaPredicted RBP27.46■■□□□ 1.99
AC009041.2-203ENST00000562570 CCDC88BA6NC98 1476 aa27.41■■□□□ 1.98
AC009041.2-203ENST00000562570 SOGA1O94964 1423 aa27.4■■□□□ 1.98
AC009041.2-203ENST00000562570 SMARCA4P51532 1647 aa27.36■■□□□ 1.97
AC009041.2-203ENST00000562570 HNRNPUL2Q1KMD3 747 aaKnown RBP27.34■■□□□ 1.97
AC009041.2-203ENST00000562570 RUSC2Q8N2Y8 1516 aa27.3■■□□□ 1.96
AC009041.2-203ENST00000562570 CSRNP3Q8WYN3 585 aa27.28■■□□□ 1.96
AC009041.2-203ENST00000562570 ZEB1P37275 1124 aaPredicted RBP27.1■■□□□ 1.93
AC009041.2-203ENST00000562570 ATAD2BQ9ULI0 1458 aa27.08■■□□□ 1.93
AC009041.2-203ENST00000562570 APLP2Q06481 763 aa27.04■■□□□ 1.92
AC009041.2-203ENST00000562570 BAZ1BQ9UIG0 1483 aaKnown RBP27.03■■□□□ 1.92
AC009041.2-203ENST00000562570 EIF4G1Q04637 1599 aaKnown RBP27.01■■□□□ 1.91
AC009041.2-203ENST00000562570 CEP162Q5TB80 1403 aa27.01■■□□□ 1.91
AC009041.2-203ENST00000562570 ITGAEP38570 1179 aa27.01■■□□□ 1.91
AC009041.2-203ENST00000562570 TOP2AP11388 1531 aaKnown RBP26.98■■□□□ 1.91
AC009041.2-203ENST00000562570 DNAJC5BQ9UF47 199 aa26.95■■□□□ 1.91
AC009041.2-203ENST00000562570 SMARCA2P51531 1590 aa26.95■■□□□ 1.9
AC009041.2-203ENST00000562570 ATP1B4Q9UN42 357 aaPredicted RBP26.95■■□□□ 1.9
AC009041.2-203ENST00000562570 YTHDC1Q96MU7 727 aaKnown RBP26.92■■□□□ 1.9
AC009041.2-203ENST00000562570 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
AC009041.2-203ENST00000562570 P3H3Q8IVL6 736 aa26.76■■□□□ 1.87
AC009041.2-203ENST00000562570 DIEXFQ68CQ4 756 aaKnown RBP26.71■■□□□ 1.87
AC009041.2-203ENST00000562570 CC2D2AQ9P2K1 1620 aa26.68■■□□□ 1.86
AC009041.2-203ENST00000562570 TNIKQ9UKE5 1360 aa26.65■■□□□ 1.86
AC009041.2-203ENST00000562570 NCAPD3P42695 1498 aa26.62■■□□□ 1.85
AC009041.2-203ENST00000562570 PEG3Q9GZU2 1588 aa26.61■■□□□ 1.85
AC009041.2-203ENST00000562570 CLIP1P30622 1438 aa26.59■■□□□ 1.85
AC009041.2-203ENST00000562570 RAPGEF2Q9Y4G8 1499 aa26.56■■□□□ 1.84
AC009041.2-203ENST00000562570 SCAF1Q9H7N4 1312 aaKnown RBP26.55■■□□□ 1.84
AC009041.2-203ENST00000562570 GOLGA3Q08378 1498 aa26.54■■□□□ 1.84
AC009041.2-203ENST00000562570 SYNJ1O43426 1573 aa26.54■■□□□ 1.84
AC009041.2-203ENST00000562570 KANK4Q5T7N3 995 aaPredicted RBP26.5■■□□□ 1.83
AC009041.2-203ENST00000562570 NEUROD1Q13562 356 aa26.45■■□□□ 1.83
AC009041.2-203ENST00000562570 HMGXB3Q12766 1538 aa26.36■■□□□ 1.81
AC009041.2-203ENST00000562570 ARID3CA6NKF2 412 aa26.35■■□□□ 1.81
AC009041.2-203ENST00000562570 NESP48681 1621 aa26.34■■□□□ 1.81
AC009041.2-203ENST00000562570 CEP164Q9UPV0 1460 aa26.34■■□□□ 1.81
AC009041.2-203ENST00000562570 EEA1Q15075 1411 aa26.29■■□□□ 1.8
AC009041.2-203ENST00000562570 FAM50AQ14320 339 aaKnown RBP26.29■■□□□ 1.8
AC009041.2-203ENST00000562570 ZNF316A6NFI3 1004 aaPredicted RBP26.27■■□□□ 1.8
AC009041.2-203ENST00000562570 GTF3C3Q9Y5Q9 886 aa26.27■■□□□ 1.8
AC009041.2-203ENST00000562570 CADPSQ9ULU8 1353 aa26.24■■□□□ 1.79
AC009041.2-203ENST00000562570 MIER1Q8N108 512 aa26.24■■□□□ 1.79
AC009041.2-203ENST00000562570 VPS8Q8N3P4 1428 aa26.14■■□□□ 1.78
AC009041.2-203ENST00000562570 HIRIP3Q9BW71 556 aaPredicted RBP26.14■■□□□ 1.78
AC009041.2-203ENST00000562570 CFTRP13569 1480 aa26.14■■□□□ 1.78
AC009041.2-203ENST00000562570 ACIN1Q9UKV3 1341 aaKnown RBP26.14■■□□□ 1.78
AC009041.2-203ENST00000562570 CENPBP07199 599 aaPredicted RBP26.09■■□□□ 1.77
AC009041.2-203ENST00000562570 CUX2O14529 1486 aa26.07■■□□□ 1.76
AC009041.2-203ENST00000562570 KIF27Q86VH2 1401 aa26.03■■□□□ 1.76
AC009041.2-203ENST00000562570 KIF21BO75037 1637 aa26■■□□□ 1.75
AC009041.2-203ENST00000562570 CUX1P39880 1505 aa25.99■■□□□ 1.75
AC009041.2-203ENST00000562570 FANCD2Q9BXW9 1451 aa25.99■■□□□ 1.75
AC009041.2-203ENST00000562570 ARAP1Q96P48 1450 aa25.95■■□□□ 1.75
AC009041.2-203ENST00000562570 SIN3AQ96ST3 1273 aa25.93■■□□□ 1.74
AC009041.2-203ENST00000562570 CARMIL1Q5VZK9 1371 aa25.88■■□□□ 1.73
AC009041.2-203ENST00000562570 RAD54L2Q9Y4B4 1467 aa25.86■■□□□ 1.73
AC009041.2-203ENST00000562570 TOP2BQ02880 1626 aa25.85■■□□□ 1.73
AC009041.2-203ENST00000562570 TDRD9Q8NDG6 1382 aaKnown RBP25.85■■□□□ 1.73
AC009041.2-203ENST00000562570 IGF1RP08069 1367 aa25.85■■□□□ 1.73
AC009041.2-203ENST00000562570 PELP1Q8IZL8 1130 aaKnown RBP25.83■■□□□ 1.73
AC009041.2-203ENST00000562570 CNGB1Q14028 1251 aaPredicted RBP25.82■■□□□ 1.72
AC009041.2-203ENST00000562570 CHIC2Q9UKJ5 165 aa25.8■■□□□ 1.72
AC009041.2-203ENST00000562570 PRXQ9BXM0 1461 aa25.77■■□□□ 1.72
AC009041.2-203ENST00000562570 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
AC009041.2-203ENST00000562570 KCNH8Q96L42 1107 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms