RNA–Protein interactions for RNA: ENST00000560985.5

TICRR-202, Transcript of TOPBP1 interacting checkpoint and replication regulator, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TICRR, Length 6,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TICRR-202ENST00000560985 PLCB2Q00722 1185 aa18.59■□□□□ 0.57
TICRR-202ENST00000560985 ARID4BQ4LE39 1312 aaPredicted RBP18.59■□□□□ 0.57
TICRR-202ENST00000560985 MYH16Q9H6N6 1097 aa18.58■□□□□ 0.57
TICRR-202ENST00000560985 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.56
TICRR-202ENST00000560985 GOLGA6L22H0YM25 854 aa18.57■□□□□ 0.56
TICRR-202ENST00000560985 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
TICRR-202ENST00000560985 ZRSR1Q15695 479 aaKnown RBP18.54■□□□□ 0.56
TICRR-202ENST00000560985 MRS2Q9HD23 443 aa18.52■□□□□ 0.55
TICRR-202ENST00000560985 HIRIP3Q9BW71 556 aaPredicted RBP18.51■□□□□ 0.55
TICRR-202ENST00000560985 ERICH6BQ5W0A0 696 aa18.51■□□□□ 0.55
TICRR-202ENST00000560985 ZBTB7CA1YPR0 619 aa18.49■□□□□ 0.55
TICRR-202ENST00000560985 ARID3AQ99856 593 aa18.48■□□□□ 0.55
TICRR-202ENST00000560985 MIER1Q8N108 512 aa18.47■□□□□ 0.55
TICRR-202ENST00000560985 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
TICRR-202ENST00000560985 KDM2AQ9Y2K7 1162 aa18.42■□□□□ 0.54
TICRR-202ENST00000560985 NPM1P06748 294 aaKnown RBP eCLIP18.41■□□□□ 0.54
TICRR-202ENST00000560985 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.4■□□□□ 0.54
TICRR-202ENST00000560985 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.534e-9■■■■□ 21.5
TICRR-202ENST00000560985 PPM1GO15355 546 aaPredicted RBP18.34■□□□□ 0.53
TICRR-202ENST00000560985 ABCC9O60706 1549 aa18.34■□□□□ 0.53
TICRR-202ENST00000560985 NOP58Q9Y2X3 529 aaKnown RBP18.33■□□□□ 0.52
TICRR-202ENST00000560985 CASC1Q6TDU7 716 aa18.32■□□□□ 0.52
TICRR-202ENST00000560985 CHIC2Q9UKJ5 165 aa18.31■□□□□ 0.52
TICRR-202ENST00000560985 SUPT16HQ9Y5B9 1047 aaKnown RBP18.31■□□□□ 0.52
TICRR-202ENST00000560985 C14orf37Q86TY3 774 aa18.3■□□□□ 0.52
TICRR-202ENST00000560985 SPRYD3Q8NCJ5 442 aa18.3■□□□□ 0.52
TICRR-202ENST00000560985 GOLGA6L6A8MZA4 724 aa18.3■□□□□ 0.52
TICRR-202ENST00000560985 DEKP35659 375 aaKnown RBP18.3■□□□□ 0.52
TICRR-202ENST00000560985 HSP90AB1P08238 724 aaKnown RBP18.29■□□□□ 0.52
TICRR-202ENST00000560985 MSNP26038 577 aaKnown RBP18.27■□□□□ 0.52
TICRR-202ENST00000560985 RGS3P49796 1198 aa18.27■□□□□ 0.52
TICRR-202ENST00000560985 HAP1P54257 671 aaPredicted RBP18.26■□□□□ 0.51
TICRR-202ENST00000560985 NAP1L2Q9ULW6 460 aaPredicted RBP18.26■□□□□ 0.51
TICRR-202ENST00000560985 CHAF1AQ13111 956 aaPredicted RBP18.26■□□□□ 0.51
TICRR-202ENST00000560985 DRC7Q8IY82 874 aa18.24■□□□□ 0.51
TICRR-202ENST00000560985 FTSJ3Q8IY81 847 aaKnown RBP18.22■□□□□ 0.51
TICRR-202ENST00000560985 CLSTN1O94985 981 aa18.21■□□□□ 0.51
TICRR-202ENST00000560985 TNNT3P45378 269 aaPredicted RBP18.18■□□□□ 0.5
TICRR-202ENST00000560985 NEUROD2Q15784 382 aa18.15■□□□□ 0.5
TICRR-202ENST00000560985 FGD1P98174 961 aa18.14■□□□□ 0.5
TICRR-202ENST00000560985 NRDCO43847 1150 aa18.13■□□□□ 0.49
TICRR-202ENST00000560985 FRAT1Q92837 279 aaPredicted RBP18.12■□□□□ 0.49
TICRR-202ENST00000560985 TRHP20396 242 aaPredicted RBP18.12■□□□□ 0.49
TICRR-202ENST00000560985 B4GALNT3Q6L9W6 998 aa18.1■□□□□ 0.49
TICRR-202ENST00000560985 GOLGA6L4A6NEF3 574 aa18.1■□□□□ 0.49
TICRR-202ENST00000560985 L1TD1Q5T7N2 865 aaKnown RBP18.09■□□□□ 0.49
TICRR-202ENST00000560985 KCNJ4P48050 445 aa18.08■□□□□ 0.49
TICRR-202ENST00000560985 GZF1Q9H116 711 aaPredicted RBP18.08■□□□□ 0.48
TICRR-202ENST00000560985 OS9Q13438 667 aaPredicted RBP18.06■□□□□ 0.48
TICRR-202ENST00000560985 HSCBQ8IWL3 235 aa18.06■□□□□ 0.48
TICRR-202ENST00000560985 NOC3LQ8WTT2 800 aaKnown RBP18.06■□□□□ 0.48
TICRR-202ENST00000560985 PDE4CQ08493 712 aa18.05■□□□□ 0.48
TICRR-202ENST00000560985 CSRNP3Q8WYN3 585 aa18.04■□□□□ 0.48
TICRR-202ENST00000560985 EIF4G2P78344 907 aaKnown RBP eCLIP18.04■□□□□ 0.48
TICRR-202ENST00000560985 PPP4R2Q9NY27 417 aa18.04■□□□□ 0.48
TICRR-202ENST00000560985 NPHP1O15259 732 aa18.03■□□□□ 0.48
TICRR-202ENST00000560985 PNNQ9H307 717 aaKnown RBP18.03■□□□□ 0.48
TICRR-202ENST00000560985 LMOD2Q6P5Q4 547 aa18■□□□□ 0.47
TICRR-202ENST00000560985 PRM3Q9NNZ6 103 aa17.98■□□□□ 0.47
TICRR-202ENST00000560985 PPP1R15AO75807 674 aaPredicted RBP17.96■□□□□ 0.47
TICRR-202ENST00000560985 RGL3Q3MIN7 710 aa17.96■□□□□ 0.46
TICRR-202ENST00000560985 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
TICRR-202ENST00000560985 KIAA2012Q0VF49 1180 aa17.94■□□□□ 0.46
TICRR-202ENST00000560985 A0A0U1RQG5 324 aaPredicted RBP17.93■□□□□ 0.46
TICRR-202ENST00000560985 ISY1Q9ULR0 285 aaKnown RBP17.93■□□□□ 0.46
TICRR-202ENST00000560985 ANO8Q9HCE9 1232 aaPredicted RBP17.93■□□□□ 0.46
TICRR-202ENST00000560985 RRP7BPQ9NSQ0 103 aa17.93■□□□□ 0.46
TICRR-202ENST00000560985 GOLGA2Q08379 1002 aa17.91■□□□□ 0.46
TICRR-202ENST00000560985 GNL2Q13823 731 aaKnown RBP17.91■□□□□ 0.46
TICRR-202ENST00000560985 KNSTRNQ9Y448 316 aa17.91■□□□□ 0.46
TICRR-202ENST00000560985 MAPK8IP3Q9UPT6 1336 aa17.91■□□□□ 0.46
TICRR-202ENST00000560985 CC2D1BQ5T0F9 858 aaKnown RBP17.91■□□□□ 0.46
TICRR-202ENST00000560985 RBM19Q9Y4C8 960 aaKnown RBP17.91■□□□□ 0.46
TICRR-202ENST00000560985 KCNH8Q96L42 1107 aa17.89■□□□□ 0.45
TICRR-202ENST00000560985 GOLGA6L1Q8N7Z2 621 aa17.87■□□□□ 0.45
TICRR-202ENST00000560985 SLKQ9H2G2 1235 aaPredicted RBP17.87■□□□□ 0.45
TICRR-202ENST00000560985 APBB1O00213 710 aa17.87■□□□□ 0.45
TICRR-202ENST00000560985 PATL2C9JE40 543 aaKnown RBP17.86■□□□□ 0.45
TICRR-202ENST00000560985 MCCP23508 829 aa17.85■□□□□ 0.45
TICRR-202ENST00000560985 TSPY4P0CV99 314 aa17.84■□□□□ 0.45
TICRR-202ENST00000560985 TSPY10P0CW01 314 aa17.84■□□□□ 0.45
TICRR-202ENST00000560985 U2SURPO15042 1029 aaKnown RBP17.83■□□□□ 0.44
TICRR-202ENST00000560985 VSIG10Q8N0Z9 540 aa17.82■□□□□ 0.44
TICRR-202ENST00000560985 CREBRFQ8IUR6 639 aa17.81■□□□□ 0.44
TICRR-202ENST00000560985 FBXO3Q9UK99 471 aa17.81■□□□□ 0.44
TICRR-202ENST00000560985 DCAF1Q9Y4B6 1507 aa17.81■□□□□ 0.44
TICRR-202ENST00000560985 HSP90AA2PQ14568 343 aaPredicted RBP17.8■□□□□ 0.44
TICRR-202ENST00000560985 HSP90B1P14625 803 aaKnown RBP17.8■□□□□ 0.44
TICRR-202ENST00000560985 FOXD4L1Q9NU39 408 aa17.79■□□□□ 0.44
TICRR-202ENST00000560985 GBP4Q96PP9 640 aa17.78■□□□□ 0.44
TICRR-202ENST00000560985 GOLGA6L3A6NEY3 463 aa17.78■□□□□ 0.44
TICRR-202ENST00000560985 SETQ01105 290 aaPredicted RBP17.77■□□□□ 0.43
TICRR-202ENST00000560985 CALRP27797 417 aaKnown RBP17.76■□□□□ 0.43
TICRR-202ENST00000560985 CARD11Q9BXL7 1154 aa17.76■□□□□ 0.43
TICRR-202ENST00000560985 PTMSP20962 102 aa17.76■□□□□ 0.43
TICRR-202ENST00000560985 CHMP7Q8WUX9 453 aaPredicted RBP17.74■□□□□ 0.43
TICRR-202ENST00000560985 NUDCQ9Y266 331 aa17.74■□□□□ 0.43
TICRR-202ENST00000560985 MTUS2Q5JR59 1369 aa17.73■□□□□ 0.43
TICRR-202ENST00000560985 SOX12O15370 315 aa17.71■□□□□ 0.43
TICRR-202ENST00000560985 NOL8Q76FK4 1167 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms