RNA–Protein interactions for RNA: ENST00000560985.5

TICRR-202, Transcript of TOPBP1 interacting checkpoint and replication regulator, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TICRR, Length 6,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TICRR-202ENST00000560985 DCAF8L2P0C7V8 631 aa23.69■■□□□ 1.38
TICRR-202ENST00000560985 PELP1Q8IZL8 1130 aaKnown RBP22.88■■□□□ 1.25
TICRR-202ENST00000560985 EHMT2Q96KQ7 1210 aa22.57■■□□□ 1.2
TICRR-202ENST00000560985 SUPT5HO00267 1087 aaKnown RBP22.42■■□□□ 1.18
TICRR-202ENST00000560985 ERICH6Q7L0X2 663 aa22.36■■□□□ 1.17
TICRR-202ENST00000560985 MYT1Q01538 1121 aa21.88■■□□□ 1.09
TICRR-202ENST00000560985 TTBK1Q5TCY1 1321 aaPredicted RBP21.86■■□□□ 1.09
TICRR-202ENST00000560985 CCER1Q8TC90 406 aaPredicted RBP21.85■■□□□ 1.09
TICRR-202ENST00000560985 SHROOM4Q9ULL8 1493 aa21.72■■□□□ 1.07
TICRR-202ENST00000560985 CENPBP07199 599 aaPredicted RBP21.68■■□□□ 1.06
TICRR-202ENST00000560985 APLP2Q06481 763 aa21.68■■□□□ 1.06
TICRR-202ENST00000560985 PCGF6Q9BYE7 350 aa21.61■■□□□ 1.05
TICRR-202ENST00000560985 YTHDC1Q96MU7 727 aaKnown RBP21.52■■□□□ 1.04
TICRR-202ENST00000560985 FAM9AQ8IZU1 332 aaPredicted RBP21.41■■□□□ 1.02
TICRR-202ENST00000560985 NEFLP07196 543 aa21.34■■□□□ 1.01
TICRR-202ENST00000560985 RANGAP1P46060 587 aaPredicted RBP21.27■■□□□ 1
TICRR-202ENST00000560985 DAXXQ9UER7 740 aaPredicted RBP21.06■□□□□ 0.96
TICRR-202ENST00000560985 ATP1B4Q9UN42 357 aaPredicted RBP21.06■□□□□ 0.96
TICRR-202ENST00000560985 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
TICRR-202ENST00000560985 PPARGC1BQ86YN6 1023 aaKnown RBP20.73■□□□□ 0.91
TICRR-202ENST00000560985 POLR3GLQ9BT43 218 aa20.68■□□□□ 0.9
TICRR-202ENST00000560985 CNGB1Q14028 1251 aaPredicted RBP20.68■□□□□ 0.9
TICRR-202ENST00000560985 RTL5Q5HYW3 569 aaPredicted RBP20.59■□□□□ 0.89
TICRR-202ENST00000560985 ZNF316A6NFI3 1004 aaPredicted RBP20.57■□□□□ 0.88
TICRR-202ENST00000560985 UBTFP17480 764 aaKnown RBP20.52■□□□□ 0.88
TICRR-202ENST00000560985 TRIM41Q8WV44 630 aa20.48■□□□□ 0.87
TICRR-202ENST00000560985 MYT1LQ9UL68 1186 aa20.46■□□□□ 0.87
TICRR-202ENST00000560985 CLSPNQ9HAW4 1339 aa20.4■□□□□ 0.86
TICRR-202ENST00000560985 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.85
TICRR-202ENST00000560985 HRCP23327 699 aa20.35■□□□□ 0.85
TICRR-202ENST00000560985 ITGAEP38570 1179 aa20.33■□□□□ 0.85
TICRR-202ENST00000560985 SLC4A1APQ9BWU0 796 aaKnown RBP20.25■□□□□ 0.83
TICRR-202ENST00000560985 BCANQ96GW7 911 aa20.22■□□□□ 0.83
TICRR-202ENST00000560985 TRIM26Q12899 539 aaPredicted RBP20.16■□□□□ 0.82
TICRR-202ENST00000560985 HNRNPUL2Q1KMD3 747 aaKnown RBP20.04■□□□□ 0.8
TICRR-202ENST00000560985 EIF5BO60841 1220 aaKnown RBP20.04■□□□□ 0.8
TICRR-202ENST00000560985 BCL11AQ9H165 835 aa20.03■□□□□ 0.8
TICRR-202ENST00000560985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.01■□□□□ 0.79
TICRR-202ENST00000560985 DIEXFQ68CQ4 756 aaKnown RBP19.97■□□□□ 0.79
TICRR-202ENST00000560985 GTF3C3Q9Y5Q9 886 aa19.95■□□□□ 0.78
TICRR-202ENST00000560985 NISCHQ9Y2I1 1504 aa19.91■□□□□ 0.78
TICRR-202ENST00000560985 CDK11AQ9UQ88 783 aaPredicted RBP19.88■□□□□ 0.77
TICRR-202ENST00000560985 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
TICRR-202ENST00000560985 ZBTB47Q9UFB7 747 aaPredicted RBP19.75■□□□□ 0.75
TICRR-202ENST00000560985 NPM2Q86SE8 214 aaKnown RBP19.75■□□□□ 0.75
TICRR-202ENST00000560985 SLC24A1O60721 1099 aa19.7■□□□□ 0.74
TICRR-202ENST00000560985 NEUROD1Q13562 356 aa19.65■□□□□ 0.74
TICRR-202ENST00000560985 CANXP27824 592 aaKnown RBP19.63■□□□□ 0.73
TICRR-202ENST00000560985 ANP32AP39687 249 aaKnown RBP19.6■□□□□ 0.73
TICRR-202ENST00000560985 GLIPR1L2Q4G1C9 344 aa19.58■□□□□ 0.73
TICRR-202ENST00000560985 ANP32CO43423 234 aa19.53■□□□□ 0.72
TICRR-202ENST00000560985 FAM50AQ14320 339 aaKnown RBP19.52■□□□□ 0.72
TICRR-202ENST00000560985 ARXQ96QS3 562 aa19.52■□□□□ 0.72
TICRR-202ENST00000560985 TRIM52Q96A61 297 aa19.52■□□□□ 0.72
TICRR-202ENST00000560985 ZNF326Q5BKZ1 582 aaKnown RBP19.51■□□□□ 0.71
TICRR-202ENST00000560985 ANP32BQ92688 251 aaKnown RBP19.51■□□□□ 0.71
TICRR-202ENST00000560985 NBR1Q14596 966 aa19.47■□□□□ 0.71
TICRR-202ENST00000560985 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
TICRR-202ENST00000560985 HSP90AA1P07900 732 aaKnown RBP19.38■□□□□ 0.69
TICRR-202ENST00000560985 ACIN1Q9UKV3 1341 aaKnown RBP19.33■□□□□ 0.68
TICRR-202ENST00000560985 FKBP8Q14318 412 aa19.28■□□□□ 0.68
TICRR-202ENST00000560985 FBLN2P98095 1184 aa19.21■□□□□ 0.67
TICRR-202ENST00000560985 NEFMP07197 916 aa19.18■□□□□ 0.66
TICRR-202ENST00000560985 UPF2Q9HAU5 1272 aaKnown RBP19.11■□□□□ 0.65
TICRR-202ENST00000560985 SALL2Q9Y467 1007 aaPredicted RBP19.09■□□□□ 0.65
TICRR-202ENST00000560985 FAM9BQ8IZU0 186 aa18.98■□□□□ 0.63
TICRR-202ENST00000560985 AMER1Q5JTC6 1135 aaPredicted RBP18.96■□□□□ 0.63
TICRR-202ENST00000560985 HNRNPUQ00839 825 aaKnown RBP eCLIP18.95■□□□□ 0.62
TICRR-202ENST00000560985 RTN4Q9NQC3 1192 aaKnown RBP18.95■□□□□ 0.62
TICRR-202ENST00000560985 CDK11BP21127 795 aaKnown RBP18.95■□□□□ 0.62
TICRR-202ENST00000560985 IRX6P78412 446 aaPredicted RBP18.94■□□□□ 0.62
TICRR-202ENST00000560985 CCDC136Q96JN2 1154 aa18.91■□□□□ 0.62
TICRR-202ENST00000560985 TNNT2P45379 298 aaPredicted RBP18.91■□□□□ 0.62
TICRR-202ENST00000560985 TPRNQ4KMQ1 711 aa18.9■□□□□ 0.62
TICRR-202ENST00000560985 TRIM44Q96DX7 344 aaPredicted RBP18.9■□□□□ 0.62
TICRR-202ENST00000560985 A0A0G2JS52 829 aa18.87■□□□□ 0.61
TICRR-202ENST00000560985 ARID3CA6NKF2 412 aa18.85■□□□□ 0.61
TICRR-202ENST00000560985 PABPN1Q86U42 306 aaKnown RBP eCLIP18.83■□□□□ 0.6
TICRR-202ENST00000560985 ESF1Q9H501 851 aaKnown RBP18.82■□□□□ 0.6
TICRR-202ENST00000560985 NAP1L5Q96NT1 182 aaPredicted RBP18.81■□□□□ 0.6
TICRR-202ENST00000560985 NCLP19338 710 aaKnown RBP18.8■□□□□ 0.6
TICRR-202ENST00000560985 DNTTIP2Q5QJE6 756 aaKnown RBP18.8■□□□□ 0.6
TICRR-202ENST00000560985 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
TICRR-202ENST00000560985 TULP1O00294 542 aaPredicted RBP18.78■□□□□ 0.6
TICRR-202ENST00000560985 DDX10Q13206 875 aaKnown RBP18.77■□□□□ 0.6
TICRR-202ENST00000560985 PLEKHG5O94827 1062 aa18.77■□□□□ 0.6
TICRR-202ENST00000560985 PTMAP06454 111 aaKnown RBP18.75■□□□□ 0.59
TICRR-202ENST00000560985 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.75■□□□□ 0.59
TICRR-202ENST00000560985 P3H3Q8IVL6 736 aa18.7■□□□□ 0.58
TICRR-202ENST00000560985 ZNF777Q9ULD5 760 aaPredicted RBP18.69■□□□□ 0.58
TICRR-202ENST00000560985 CHGAP10645 457 aaKnown RBP18.67■□□□□ 0.58
TICRR-202ENST00000560985 STAG3Q9UJ98 1225 aa18.65■□□□□ 0.58
TICRR-202ENST00000560985 TMC1Q8TDI8 760 aa18.64■□□□□ 0.57
TICRR-202ENST00000560985 DDRGK1Q96HY6 314 aa18.62■□□□□ 0.57
TICRR-202ENST00000560985 BECN1Q14457 450 aa18.61■□□□□ 0.57
TICRR-202ENST00000560985 ANP32EQ9BTT0 268 aa18.61■□□□□ 0.57
TICRR-202ENST00000560985 SENP3-EIF4A1A0A087X0R7 540 aa18.6■□□□□ 0.57
TICRR-202ENST00000560985 TAOK2Q9UL54 1235 aa18.6■□□□□ 0.57
TICRR-202ENST00000560985 LAS1LQ9Y4W2 734 aaKnown RBP18.6■□□□□ 0.57
TICRR-202ENST00000560985 WDR43Q15061 677 aaKnown RBP eCLIP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms