RNA–Protein interactions for RNA: ENST00000560262.5

NEO1-207, Transcript of neogenin 1, humanhuman

TSL 1 (best) BASIC

Gene NEO1, Length 4,315 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-207ENST00000560262 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
NEO1-207ENST00000560262 ATAD2BQ9ULI0 1458 aa22.16■■□□□ 1.14
NEO1-207ENST00000560262 FAM9BQ8IZU0 186 aa22.13■■□□□ 1.13
NEO1-207ENST00000560262 PDS5BQ9NTI5 1447 aa22.13■■□□□ 1.13
NEO1-207ENST00000560262 NEFMP07197 916 aa22.12■■□□□ 1.13
NEO1-207ENST00000560262 HNRNPUQ00839 825 aaKnown RBP eCLIP22.12■■□□□ 1.13
NEO1-207ENST00000560262 CADPSQ9ULU8 1353 aa22.12■■□□□ 1.13
NEO1-207ENST00000560262 SLC24A1O60721 1099 aa22.11■■□□□ 1.13
NEO1-207ENST00000560262 RGL3Q3MIN7 710 aa22.1■■□□□ 1.13
NEO1-207ENST00000560262 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
NEO1-207ENST00000560262 SENP3Q9H4L4 574 aaPredicted RBP22.07■■□□□ 1.12
NEO1-207ENST00000560262 EIF4G1Q04637 1599 aaKnown RBP22.07■■□□□ 1.12
NEO1-207ENST00000560262 CANXP27824 592 aaKnown RBP22.06■■□□□ 1.12
NEO1-207ENST00000560262 MIER1Q8N108 512 aa22.06■■□□□ 1.12
NEO1-207ENST00000560262 SALL2Q9Y467 1007 aaPredicted RBP22.06■■□□□ 1.12
NEO1-207ENST00000560262 EIF4G2P78344 907 aaKnown RBP eCLIP22.05■■□□□ 1.12
NEO1-207ENST00000560262 KANK4Q5T7N3 995 aaPredicted RBP22.04■■□□□ 1.12
NEO1-207ENST00000560262 CCNB3Q8WWL7 1395 aa22.03■■□□□ 1.12
NEO1-207ENST00000560262 SMARCA4P51532 1647 aa22.03■■□□□ 1.12
NEO1-207ENST00000560262 SIN3AQ96ST3 1273 aa22.03■■□□□ 1.12
NEO1-207ENST00000560262 BCL11AQ9H165 835 aa22.02■■□□□ 1.12
NEO1-207ENST00000560262 VPS8Q8N3P4 1428 aa22.02■■□□□ 1.12
NEO1-207ENST00000560262 TMC1Q8TDI8 760 aa22.01■■□□□ 1.11
NEO1-207ENST00000560262 MRS2Q9HD23 443 aa21.97■■□□□ 1.11
NEO1-207ENST00000560262 FKBP8Q14318 412 aa21.93■■□□□ 1.1
NEO1-207ENST00000560262 ZBTB47Q9UFB7 747 aaPredicted RBP21.92■■□□□ 1.1
NEO1-207ENST00000560262 RUSC2Q8N2Y8 1516 aa21.87■■□□□ 1.09
NEO1-207ENST00000560262 RAPGEF2Q9Y4G8 1499 aa21.84■■□□□ 1.09
NEO1-207ENST00000560262 PPP1R15AO75807 674 aaPredicted RBP21.82■■□□□ 1.08
NEO1-207ENST00000560262 RTL5Q5HYW3 569 aaPredicted RBP21.82■■□□□ 1.08
NEO1-207ENST00000560262 CARD11Q9BXL7 1154 aa21.8■■□□□ 1.08
NEO1-207ENST00000560262 ARID4BQ4LE39 1312 aaPredicted RBP21.8■■□□□ 1.08
NEO1-207ENST00000560262 WDR43Q15061 677 aaKnown RBP eCLIP21.79■■□□□ 1.08
NEO1-207ENST00000560262 CARMIL2Q6F5E8 1435 aa21.78■■□□□ 1.08
NEO1-207ENST00000560262 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
NEO1-207ENST00000560262 FMN1Q68DA7 1419 aa21.77■■□□□ 1.08
NEO1-207ENST00000560262 MYT1Q01538 1121 aa21.76■■□□□ 1.07
NEO1-207ENST00000560262 FHOD3Q2V2M9 1422 aa21.76■■□□□ 1.07
NEO1-207ENST00000560262 ARHGAP35Q9NRY4 1499 aa21.74■■□□□ 1.07
NEO1-207ENST00000560262 SENP3-EIF4A1A0A087X0R7 540 aa21.74■■□□□ 1.07
NEO1-207ENST00000560262 JPH4Q96JJ6 628 aa21.71■■□□□ 1.07
NEO1-207ENST00000560262 SETD5Q9C0A6 1442 aa21.7■■□□□ 1.06
NEO1-207ENST00000560262 FOXD1Q16676 465 aa21.69■■□□□ 1.06
NEO1-207ENST00000560262 DCAF11Q8TEB1 546 aa21.68■■□□□ 1.06
NEO1-207ENST00000560262 IRX6P78412 446 aaPredicted RBP21.66■■□□□ 1.06
NEO1-207ENST00000560262 PLEKHG5O94827 1062 aa21.65■■□□□ 1.06
NEO1-207ENST00000560262 PKD2Q13563 968 aa21.63■■□□□ 1.05
NEO1-207ENST00000560262 NCAPD3P42695 1498 aa21.63■■□□□ 1.05
NEO1-207ENST00000560262 RAB3GAP2Q9H2M9 1393 aa21.63■■□□□ 1.05
NEO1-207ENST00000560262 NPM2Q86SE8 214 aaKnown RBP21.61■■□□□ 1.05
NEO1-207ENST00000560262 CCDC136Q96JN2 1154 aa21.61■■□□□ 1.05
NEO1-207ENST00000560262 MLECQ14165 292 aa21.61■■□□□ 1.05
NEO1-207ENST00000560262 GGT6Q6P531 493 aa21.61■■□□□ 1.05
NEO1-207ENST00000560262 KNSTRNQ9Y448 316 aa21.61■■□□□ 1.05
NEO1-207ENST00000560262 CDCA8Q53HL2 280 aa21.6■■□□□ 1.05
NEO1-207ENST00000560262 EFCAB2Q5VUJ9 269 aa21.59■■□□□ 1.05
NEO1-207ENST00000560262 TIMELESSQ9UNS1 1208 aa21.59■■□□□ 1.05
NEO1-207ENST00000560262 IGF1RP08069 1367 aa21.58■■□□□ 1.05
NEO1-207ENST00000560262 SCAF1Q9H7N4 1312 aaKnown RBP21.57■■□□□ 1.04
NEO1-207ENST00000560262 C14orf37Q86TY3 774 aa21.56■■□□□ 1.04
NEO1-207ENST00000560262 FGD5Q6ZNL6 1462 aa21.56■■□□□ 1.04
NEO1-207ENST00000560262 TRHP20396 242 aaPredicted RBP21.55■■□□□ 1.04
NEO1-207ENST00000560262 ANP32AP39687 249 aaKnown RBP21.55■■□□□ 1.04
NEO1-207ENST00000560262 MPHOSPH9Q99550 1183 aa21.54■■□□□ 1.04
NEO1-207ENST00000560262 RAD54L2Q9Y4B4 1467 aa21.54■■□□□ 1.04
NEO1-207ENST00000560262 HNRNPMP52272 730 aaKnown RBP eCLIP21.53■■□□□ 1.04
NEO1-207ENST00000560262 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.53■■□□□ 1.04
NEO1-207ENST00000560262 NUP155O75694 1391 aa21.52■■□□□ 1.03
NEO1-207ENST00000560262 POGKQ9P215 609 aa21.51■■□□□ 1.03
NEO1-207ENST00000560262 PPM1GO15355 546 aaPredicted RBP21.51■■□□□ 1.03
NEO1-207ENST00000560262 KANK1Q14678 1352 aa21.5■■□□□ 1.03
NEO1-207ENST00000560262 ZBTB7CA1YPR0 619 aa21.49■■□□□ 1.03
NEO1-207ENST00000560262 ANKRD30AQ9BXX3 1397 aa21.46■■□□□ 1.03
NEO1-207ENST00000560262 GAPVD1Q14C86 1478 aa21.46■■□□□ 1.03
NEO1-207ENST00000560262 TNNT2P45379 298 aaPredicted RBP21.46■■□□□ 1.03
NEO1-207ENST00000560262 HSPA5P11021 654 aaKnown RBP21.45■■□□□ 1.02
NEO1-207ENST00000560262 CC2D1BQ5T0F9 858 aaKnown RBP21.44■■□□□ 1.02
NEO1-207ENST00000560262 CFAP53Q96M91 514 aa21.44■■□□□ 1.02
NEO1-207ENST00000560262 KIF3BO15066 747 aa21.43■■□□□ 1.02
NEO1-207ENST00000560262 NEUROD2Q15784 382 aa21.43■■□□□ 1.02
NEO1-207ENST00000560262 CCDC18Q5T9S5 1454 aa21.41■■□□□ 1.02
NEO1-207ENST00000560262 TMF1P82094 1093 aa21.41■■□□□ 1.02
NEO1-207ENST00000560262 SAFB2Q14151 953 aaKnown RBP eCLIP21.41■■□□□ 1.02
NEO1-207ENST00000560262 SUPT16HQ9Y5B9 1047 aaKnown RBP21.39■■□□□ 1.01
NEO1-207ENST00000560262 PTPRGP23470 1445 aa21.39■■□□□ 1.01
NEO1-207ENST00000560262 L3MBTL2Q969R5 705 aa21.38■■□□□ 1.01
NEO1-207ENST00000560262 AQRO60306 1485 aaKnown RBP eCLIP21.37■■□□□ 1.01
NEO1-207ENST00000560262 SPAG9O60271 1321 aaKnown RBP21.36■■□□□ 1.01
NEO1-207ENST00000560262 CFTRP13569 1480 aa21.34■■□□□ 1.01
NEO1-207ENST00000560262 NESP48681 1621 aa21.34■■□□□ 1.01
NEO1-207ENST00000560262 RSPH4AQ5TD94 716 aa21.34■■□□□ 1.01
NEO1-207ENST00000560262 A0A0G2JS52 829 aa21.33■■□□□ 1
NEO1-207ENST00000560262 UPF2Q9HAU5 1272 aaKnown RBP21.33■■□□□ 1
NEO1-207ENST00000560262 STK26Q9P289 416 aa21.32■■□□□ 1
NEO1-207ENST00000560262 LMOD2Q6P5Q4 547 aa21.32■■□□□ 1
NEO1-207ENST00000560262 SRPK2P78362 688 aaKnown RBP21.31■■□□□ 1
NEO1-207ENST00000560262 CYB5RLQ6IPT4 315 aa21.29■■□□□ 1
NEO1-207ENST00000560262 HSP90AA1P07900 732 aaKnown RBP21.27■■□□□ 1
NEO1-207ENST00000560262 NUDCQ9Y266 331 aa21.27■■□□□ 1
NEO1-207ENST00000560262 U2SURPO15042 1029 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms