RNA–Protein interactions for RNA: ENST00000560262.5

NEO1-207, Transcript of neogenin 1, humanhuman

TSL 1 (best) BASIC

Gene NEO1, Length 4,315 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-207ENST00000560262 NISCHQ9Y2I1 1504 aa29.19■■■□□ 2.26
NEO1-207ENST00000560262 DCAF8L2P0C7V8 631 aa29.14■■■□□ 2.26
NEO1-207ENST00000560262 SUPT5HO00267 1087 aaKnown RBP27.6■■■□□ 2.01
NEO1-207ENST00000560262 SHROOM4Q9ULL8 1493 aa27.47■■□□□ 1.99
NEO1-207ENST00000560262 EHMT2Q96KQ7 1210 aa26.41■■□□□ 1.82
NEO1-207ENST00000560262 FAM9AQ8IZU1 332 aaPredicted RBP25.94■■□□□ 1.74
NEO1-207ENST00000560262 TRIM41Q8WV44 630 aa25.54■■□□□ 1.68
NEO1-207ENST00000560262 APLP2Q06481 763 aa25.51■■□□□ 1.67
NEO1-207ENST00000560262 TTBK1Q5TCY1 1321 aaPredicted RBP25.41■■□□□ 1.66
NEO1-207ENST00000560262 RANGAP1P46060 587 aaPredicted RBP25.33■■□□□ 1.65
NEO1-207ENST00000560262 PCGF6Q9BYE7 350 aa25.29■■□□□ 1.64
NEO1-207ENST00000560262 ABCC9O60706 1549 aa25.11■■□□□ 1.61
NEO1-207ENST00000560262 UBTFP17480 764 aaKnown RBP25.1■■□□□ 1.61
NEO1-207ENST00000560262 ATP1B4Q9UN42 357 aaPredicted RBP24.93■■□□□ 1.58
NEO1-207ENST00000560262 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
NEO1-207ENST00000560262 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
NEO1-207ENST00000560262 PPARGC1BQ86YN6 1023 aaKnown RBP24.74■■□□□ 1.55
NEO1-207ENST00000560262 LOC105371045A0A1W2PR82 267 aa24.7■■□□□ 1.54
NEO1-207ENST00000560262 CCER1Q8TC90 406 aaPredicted RBP24.66■■□□□ 1.54
NEO1-207ENST00000560262 ZEB1P37275 1124 aaPredicted RBP24.43■■□□□ 1.5
NEO1-207ENST00000560262 TRIM26Q12899 539 aaPredicted RBP24.32■■□□□ 1.48
NEO1-207ENST00000560262 ITGAEP38570 1179 aa24.19■■□□□ 1.46
NEO1-207ENST00000560262 ZCCHC6Q5VYS8 1495 aaKnown RBP24.18■■□□□ 1.46
NEO1-207ENST00000560262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.16■■□□□ 1.46
NEO1-207ENST00000560262 HNRNPUL2Q1KMD3 747 aaKnown RBP24.16■■□□□ 1.46
NEO1-207ENST00000560262 PELP1Q8IZL8 1130 aaKnown RBP24.08■■□□□ 1.45
NEO1-207ENST00000560262 SCRIBQ14160 1630 aa23.98■■□□□ 1.43
NEO1-207ENST00000560262 CCDC180Q9P1Z9 1646 aa23.95■■□□□ 1.42
NEO1-207ENST00000560262 CENPBP07199 599 aaPredicted RBP23.93■■□□□ 1.42
NEO1-207ENST00000560262 HRCP23327 699 aa23.9■■□□□ 1.42
NEO1-207ENST00000560262 MYT1LQ9UL68 1186 aa23.81■■□□□ 1.4
NEO1-207ENST00000560262 YTHDC1Q96MU7 727 aaKnown RBP23.78■■□□□ 1.4
NEO1-207ENST00000560262 CSRNP3Q8WYN3 585 aa23.69■■□□□ 1.38
NEO1-207ENST00000560262 FBLN2P98095 1184 aa23.64■■□□□ 1.37
NEO1-207ENST00000560262 FAM50AQ14320 339 aaKnown RBP23.63■■□□□ 1.37
NEO1-207ENST00000560262 POLR3GLQ9BT43 218 aa23.53■■□□□ 1.36
NEO1-207ENST00000560262 P3H3Q8IVL6 736 aa23.52■■□□□ 1.36
NEO1-207ENST00000560262 RB1CC1Q8TDY2 1594 aa23.42■■□□□ 1.34
NEO1-207ENST00000560262 CNGB1Q14028 1251 aaPredicted RBP23.4■■□□□ 1.34
NEO1-207ENST00000560262 NEFLP07196 543 aa23.39■■□□□ 1.34
NEO1-207ENST00000560262 ARID3CA6NKF2 412 aa23.38■■□□□ 1.33
NEO1-207ENST00000560262 TRIM52Q96A61 297 aa23.35■■□□□ 1.33
NEO1-207ENST00000560262 RSF1Q96T23 1441 aaPredicted RBP23.34■■□□□ 1.33
NEO1-207ENST00000560262 NEUROD1Q13562 356 aa23.28■■□□□ 1.32
NEO1-207ENST00000560262 NACADO15069 1562 aa23.28■■□□□ 1.32
NEO1-207ENST00000560262 DIEXFQ68CQ4 756 aaKnown RBP23.2■■□□□ 1.3
NEO1-207ENST00000560262 ERICH6Q7L0X2 663 aa23.05■■□□□ 1.28
NEO1-207ENST00000560262 DCAF1Q9Y4B6 1507 aa23.05■■□□□ 1.28
NEO1-207ENST00000560262 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
NEO1-207ENST00000560262 ZNF326Q5BKZ1 582 aaKnown RBP23.04■■□□□ 1.28
NEO1-207ENST00000560262 ZNF777Q9ULD5 760 aaPredicted RBP23.04■■□□□ 1.28
NEO1-207ENST00000560262 SLC4A1APQ9BWU0 796 aaKnown RBP23.01■■□□□ 1.27
NEO1-207ENST00000560262 CDK11AQ9UQ88 783 aaPredicted RBP22.98■■□□□ 1.27
NEO1-207ENST00000560262 BAZ1BQ9UIG0 1483 aaKnown RBP22.95■■□□□ 1.26
NEO1-207ENST00000560262 MYO15BQ96JP2 1530 aa22.9■■□□□ 1.26
NEO1-207ENST00000560262 WRNQ14191 1432 aaPredicted RBP eCLIP22.87■■□□□ 1.25
NEO1-207ENST00000560262 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
NEO1-207ENST00000560262 ZNF316A6NFI3 1004 aaPredicted RBP22.82■■□□□ 1.24
NEO1-207ENST00000560262 CHMP7Q8WUX9 453 aaPredicted RBP22.81■■□□□ 1.24
NEO1-207ENST00000560262 CLIP1P30622 1438 aa22.81■■□□□ 1.24
NEO1-207ENST00000560262 CHIC2Q9UKJ5 165 aa22.73■■□□□ 1.23
NEO1-207ENST00000560262 EEA1Q15075 1411 aa22.72■■□□□ 1.23
NEO1-207ENST00000560262 ANP32CO43423 234 aa22.7■■□□□ 1.22
NEO1-207ENST00000560262 MROH2BQ7Z745 1585 aa22.68■■□□□ 1.22
NEO1-207ENST00000560262 MTUS2Q5JR59 1369 aa22.67■■□□□ 1.22
NEO1-207ENST00000560262 CEP162Q5TB80 1403 aa22.66■■□□□ 1.22
NEO1-207ENST00000560262 NPM1P06748 294 aaKnown RBP eCLIP22.64■■□□□ 1.22
NEO1-207ENST00000560262 GOLGA3Q08378 1498 aa22.64■■□□□ 1.21
NEO1-207ENST00000560262 KIF27Q86VH2 1401 aa22.62■■□□□ 1.21
NEO1-207ENST00000560262 TONSLQ96HA7 1378 aa22.56■■□□□ 1.2
NEO1-207ENST00000560262 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
NEO1-207ENST00000560262 TSPY4P0CV99 314 aa22.51■■□□□ 1.19
NEO1-207ENST00000560262 TSPY10P0CW01 314 aa22.51■■□□□ 1.19
NEO1-207ENST00000560262 BCANQ96GW7 911 aa22.49■■□□□ 1.19
NEO1-207ENST00000560262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.49■■□□□ 1.19
NEO1-207ENST00000560262 CCDC88BA6NC98 1476 aa22.49■■□□□ 1.19
NEO1-207ENST00000560262 SOGA1O94964 1423 aa22.49■■□□□ 1.19
NEO1-207ENST00000560262 CEP164Q9UPV0 1460 aa22.48■■□□□ 1.19
NEO1-207ENST00000560262 CHGAP10645 457 aaKnown RBP22.47■■□□□ 1.19
NEO1-207ENST00000560262 GTF3C3Q9Y5Q9 886 aa22.45■■□□□ 1.18
NEO1-207ENST00000560262 RRP7BPQ9NSQ0 103 aa22.43■■□□□ 1.18
NEO1-207ENST00000560262 KCNH8Q96L42 1107 aa22.43■■□□□ 1.18
NEO1-207ENST00000560262 DAXXQ9UER7 740 aaPredicted RBP22.4■■□□□ 1.18
NEO1-207ENST00000560262 ESF1Q9H501 851 aaKnown RBP22.4■■□□□ 1.18
NEO1-207ENST00000560262 DDX10Q13206 875 aaKnown RBP22.4■■□□□ 1.18
NEO1-207ENST00000560262 PLEKHD1A6NEE1 506 aa22.39■■□□□ 1.18
NEO1-207ENST00000560262 ERCC6Q03468 1493 aa22.39■■□□□ 1.17
NEO1-207ENST00000560262 CUX2O14529 1486 aa22.36■■□□□ 1.17
NEO1-207ENST00000560262 ABCC8Q09428 1581 aa22.34■■□□□ 1.17
NEO1-207ENST00000560262 CARMIL1Q5VZK9 1371 aa22.33■■□□□ 1.17
NEO1-207ENST00000560262 CLSPNQ9HAW4 1339 aa22.32■■□□□ 1.16
NEO1-207ENST00000560262 PLPPR3Q6T4P5 718 aa22.32■■□□□ 1.16
NEO1-207ENST00000560262 STAG3Q9UJ98 1225 aa22.31■■□□□ 1.16
NEO1-207ENST00000560262 SMARCA2P51531 1590 aa22.3■■□□□ 1.16
NEO1-207ENST00000560262 KDM2AQ9Y2K7 1162 aa22.3■■□□□ 1.16
NEO1-207ENST00000560262 WIZO95785 1651 aa22.29■■□□□ 1.16
NEO1-207ENST00000560262 HIRIP3Q9BW71 556 aaPredicted RBP22.28■■□□□ 1.16
NEO1-207ENST00000560262 CFDP1Q9UEE9 299 aaPredicted RBP22.26■■□□□ 1.15
NEO1-207ENST00000560262 ACIN1Q9UKV3 1341 aaKnown RBP22.21■■□□□ 1.15
NEO1-207ENST00000560262 TDRD9Q8NDG6 1382 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms