RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 EIF4G1Q04637 1599 aaKnown RBP3.23□□□□□ -1.89
RGPD1-204ENST00000559485 CCER2I3L3R5 266 aa3.23□□□□□ -1.89
RGPD1-204ENST00000559485 LAS1LQ9Y4W2 734 aaKnown RBP3.23□□□□□ -1.89
RGPD1-204ENST00000559485 CLIP1P30622 1438 aa3.22□□□□□ -1.89
RGPD1-204ENST00000559485 ADRA2BP18089 450 aa3.22□□□□□ -1.89
RGPD1-204ENST00000559485 NOP58Q9Y2X3 529 aaKnown RBP3.22□□□□□ -1.89
RGPD1-204ENST00000559485 L1TD1Q5T7N2 865 aaKnown RBP3.22□□□□□ -1.89
RGPD1-204ENST00000559485 ANP32CO43423 234 aa3.21□□□□□ -1.89
RGPD1-204ENST00000559485 PTMSP20962 102 aa3.21□□□□□ -1.89
RGPD1-204ENST00000559485 MIER1Q8N108 512 aa3.21□□□□□ -1.9
RGPD1-204ENST00000559485 ZBTB47Q9UFB7 747 aaPredicted RBP3.21□□□□□ -1.9
RGPD1-204ENST00000559485 ERICH3Q5RHP9 1530 aa3.21□□□□□ -1.9
RGPD1-204ENST00000559485 TSHZ2Q9NRE2 1034 aa3.21□□□□□ -1.9
RGPD1-204ENST00000559485 HSP90AA1P07900 732 aaKnown RBP3.21□□□□□ -1.9
RGPD1-204ENST00000559485 HOMEZQ8IX15 550 aa3.2□□□□□ -1.9
RGPD1-204ENST00000559485 HMGB1P09429 215 aaKnown RBP3.2□□□□□ -1.9
RGPD1-204ENST00000559485 CUX2O14529 1486 aa3.19□□□□□ -1.9
RGPD1-204ENST00000559485 MROH2BQ7Z745 1585 aa3.19□□□□□ -1.9
RGPD1-204ENST00000559485 SMARCA4P51532 1647 aa3.19□□□□□ -1.9
RGPD1-204ENST00000559485 MAP3K1Q13233 1512 aa3.18□□□□□ -1.9
RGPD1-204ENST00000559485 TAF3Q5VWG9 929 aa3.18□□□□□ -1.9
RGPD1-204ENST00000559485 WIZO95785 1651 aa3.18□□□□□ -1.9
RGPD1-204ENST00000559485 SMARCA2P51531 1590 aa3.18□□□□□ -1.9
RGPD1-204ENST00000559485 MTERF4Q7Z6M4 381 aaKnown RBP3.18□□□□□ -1.9
RGPD1-204ENST00000559485 PABPN1Q86U42 306 aaKnown RBP eCLIP3.18□□□□□ -1.9
RGPD1-204ENST00000559485 MAP7D2Q96T17 732 aa3.18□□□□□ -1.9
RGPD1-204ENST00000559485 RBM19Q9Y4C8 960 aaKnown RBP3.18□□□□□ -1.9
RGPD1-204ENST00000559485 CNGB1Q14028 1251 aaPredicted RBP3.17□□□□□ -1.9
RGPD1-204ENST00000559485 HNRNPUL2Q1KMD3 747 aaKnown RBP3.17□□□□□ -1.9
RGPD1-204ENST00000559485 RRBP1Q9P2E9 1410 aaKnown RBP3.17□□□□□ -1.9
RGPD1-204ENST00000559485 FKBP8Q14318 412 aa3.17□□□□□ -1.9
RGPD1-204ENST00000559485 CDK11BP21127 795 aaKnown RBP3.17□□□□□ -1.9
RGPD1-204ENST00000559485 CCDC136Q96JN2 1154 aa3.17□□□□□ -1.9
RGPD1-204ENST00000559485 RRP9O43818 475 aaKnown RBP3.16□□□□□ -1.9
RGPD1-204ENST00000559485 NEFMP07197 916 aa3.16□□□□□ -1.9
RGPD1-204ENST00000559485 FAM43AQ8N2R8 423 aa3.16□□□□□ -1.9
RGPD1-204ENST00000559485 TAF7LQ5H9L4 462 aa3.16□□□□□ -1.9
RGPD1-204ENST00000559485 SLC4A1APQ9BWU0 796 aaKnown RBP3.16□□□□□ -1.9
RGPD1-204ENST00000559485 CCDC88BA6NC98 1476 aa3.16□□□□□ -1.9
RGPD1-204ENST00000559485 CECR2Q9BXF3 1484 aa3.16□□□□□ -1.9
RGPD1-204ENST00000559485 DHX57Q6P158 1386 aaKnown RBP3.16□□□□□ -1.9
RGPD1-204ENST00000559485 PPP4R2Q9NY27 417 aa3.16□□□□□ -1.9
RGPD1-204ENST00000559485 TPM2P07951 284 aa3.16□□□□□ -1.9
RGPD1-204ENST00000559485 TAOK2Q9UL54 1235 aa3.16□□□□□ -1.9
RGPD1-204ENST00000559485 FHAD1B1AJZ9 1412 aa3.16□□□□□ -1.9
RGPD1-204ENST00000559485 HSP90AA2PQ14568 343 aaPredicted RBP3.16□□□□□ -1.9
RGPD1-204ENST00000559485 CCNB3Q8WWL7 1395 aa3.15□□□□□ -1.9
RGPD1-204ENST00000559485 PEG3Q9GZU2 1588 aa3.15□□□□□ -1.91
RGPD1-204ENST00000559485 ARID3AQ99856 593 aa3.15□□□□□ -1.91
RGPD1-204ENST00000559485 SETD5Q9C0A6 1442 aa3.14□□□□□ -1.91
RGPD1-204ENST00000559485 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.14□□□□□ -1.91
RGPD1-204ENST00000559485 ABCC8Q09428 1581 aa3.14□□□□□ -1.91
RGPD1-204ENST00000559485 CALRP27797 417 aaKnown RBP3.14□□□□□ -1.91
RGPD1-204ENST00000559485 PDE4CQ08493 712 aa3.14□□□□□ -1.91
RGPD1-204ENST00000559485 TONSLQ96HA7 1378 aa3.14□□□□□ -1.91
RGPD1-204ENST00000559485 NAP1L5Q96NT1 182 aaPredicted RBP3.14□□□□□ -1.91
RGPD1-204ENST00000559485 KIF27Q86VH2 1401 aa3.13□□□□□ -1.91
RGPD1-204ENST00000559485 BECN1Q14457 450 aa3.13□□□□□ -1.91
RGPD1-204ENST00000559485 SOGA1O94964 1423 aa3.13□□□□□ -1.91
RGPD1-204ENST00000559485 TOP2BQ02880 1626 aa3.13□□□□□ -1.91
RGPD1-204ENST00000559485 IPO9Q96P70 1041 aaKnown RBP3.13□□□□□ -1.91
RGPD1-204ENST00000559485 CUX1P39880 1505 aa3.13□□□□□ -1.91
RGPD1-204ENST00000559485 BIVM-ERCC5R4GMW8 1640 aa3.13□□□□□ -1.91
RGPD1-204ENST00000559485 SYNJ1O43426 1573 aa3.13□□□□□ -1.91
RGPD1-204ENST00000559485 HSP90B1P14625 803 aaKnown RBP3.12□□□□□ -1.91
RGPD1-204ENST00000559485 NBR1Q14596 966 aa3.12□□□□□ -1.91
RGPD1-204ENST00000559485 TSPYL1Q9H0U9 437 aa3.12□□□□□ -1.91
RGPD1-204ENST00000559485 PLCB2Q00722 1185 aa3.12□□□□□ -1.91
RGPD1-204ENST00000559485 VSIG10Q8N0Z9 540 aa3.12□□□□□ -1.91
RGPD1-204ENST00000559485 BCANQ96GW7 911 aa3.12□□□□□ -1.91
RGPD1-204ENST00000559485 EFCAB5A4FU69 1503 aa3.12□□□□□ -1.91
RGPD1-204ENST00000559485 CCDC18Q5T9S5 1454 aa3.11□□□□□ -1.91
RGPD1-204ENST00000559485 ARHGAP35Q9NRY4 1499 aa3.11□□□□□ -1.91
RGPD1-204ENST00000559485 GOLGA6L3A6NEY3 463 aa3.11□□□□□ -1.91
RGPD1-204ENST00000559485 PDIA4P13667 645 aaKnown RBP3.11□□□□□ -1.91
RGPD1-204ENST00000559485 A0A0U1RQG5 324 aaPredicted RBP3.11□□□□□ -1.91
RGPD1-204ENST00000559485 CANXP27824 592 aaKnown RBP3.11□□□□□ -1.91
RGPD1-204ENST00000559485 AXDND1Q5T1B0 1012 aaPredicted RBP3.11□□□□□ -1.91
RGPD1-204ENST00000559485 PNNQ9H307 717 aaKnown RBP3.1□□□□□ -1.91
RGPD1-204ENST00000559485 ANO8Q9HCE9 1232 aaPredicted RBP3.1□□□□□ -1.91
RGPD1-204ENST00000559485 KTN1Q86UP2 1357 aaKnown RBP3.1□□□□□ -1.91
RGPD1-204ENST00000559485 CFAP43Q8NDM7 1665 aa3.1□□□□□ -1.91
RGPD1-204ENST00000559485 TIAM1Q13009 1591 aa3.1□□□□□ -1.91
RGPD1-204ENST00000559485 C11orf95C9JLR9 678 aaPredicted RBP3.1□□□□□ -1.91
RGPD1-204ENST00000559485 GSE1Q14687 1217 aa3.1□□□□□ -1.91
RGPD1-204ENST00000559485 FBXO3Q9UK99 471 aa3.1□□□□□ -1.91
RGPD1-204ENST00000559485 AQRO60306 1485 aaKnown RBP eCLIP3.1□□□□□ -1.91
RGPD1-204ENST00000559485 ARAP1Q96P48 1450 aa3.09□□□□□ -1.91
RGPD1-204ENST00000559485 UPF2Q9HAU5 1272 aaKnown RBP3.09□□□□□ -1.91
RGPD1-204ENST00000559485 ISY1Q9ULR0 285 aaKnown RBP3.09□□□□□ -1.91
RGPD1-204ENST00000559485 ROCK2O75116 1388 aaKnown RBP3.09□□□□□ -1.91
RGPD1-204ENST00000559485 RAB3GAP2Q9H2M9 1393 aa3.09□□□□□ -1.91
RGPD1-204ENST00000559485 TCERG1O14776 1098 aaKnown RBP3.09□□□□□ -1.91
RGPD1-204ENST00000559485 THOC2Q8NI27 1593 aaKnown RBP3.09□□□□□ -1.91
RGPD1-204ENST00000559485 FYCO1Q9BQS8 1478 aa3.09□□□□□ -1.91
RGPD1-204ENST00000559485 PRXQ9BXM0 1461 aa3.09□□□□□ -1.91
RGPD1-204ENST00000559485 ZBED9Q6R2W3 1325 aa3.09□□□□□ -1.92
RGPD1-204ENST00000559485 PTMAP06454 111 aaKnown RBP3.09□□□□□ -1.92
RGPD1-204ENST00000559485 HNRNPUQ00839 825 aaKnown RBP eCLIP3.09□□□□□ -1.92
RGPD1-204ENST00000559485 CALD1Q05682 793 aaKnown RBP3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms