RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 MYT1Q01538 1121 aa4.34□□□□□ -1.71
RGPD1-204ENST00000559485 PELP1Q8IZL8 1130 aaKnown RBP4.27□□□□□ -1.73
RGPD1-204ENST00000559485 NISCHQ9Y2I1 1504 aa4.2□□□□□ -1.74
RGPD1-204ENST00000559485 CHIC1Q5VXU3 224 aa4.18□□□□□ -1.74
RGPD1-204ENST00000559485 AEBP2Q6ZN18 517 aaPredicted RBP4.18□□□□□ -1.74
RGPD1-204ENST00000559485 POTEDQ86YR6 584 aa4.13□□□□□ -1.75
RGPD1-204ENST00000559485 TTBK1Q5TCY1 1321 aaPredicted RBP4.12□□□□□ -1.75
RGPD1-204ENST00000559485 PHF23Q9BUL5 403 aaPredicted RBP3.98□□□□□ -1.77
RGPD1-204ENST00000559485 ERICH6Q7L0X2 663 aa3.87□□□□□ -1.79
RGPD1-204ENST00000559485 DNAJC5BQ9UF47 199 aa3.82□□□□□ -1.8
RGPD1-204ENST00000559485 ZEB1P37275 1124 aaPredicted RBP3.79□□□□□ -1.8
RGPD1-204ENST00000559485 SLC24A1O60721 1099 aa3.74□□□□□ -1.81
RGPD1-204ENST00000559485 CENPBP07199 599 aaPredicted RBP3.73□□□□□ -1.81
RGPD1-204ENST00000559485 HRCP23327 699 aa3.73□□□□□ -1.81
RGPD1-204ENST00000559485 DCAF1Q9Y4B6 1507 aa3.67□□□□□ -1.82
RGPD1-204ENST00000559485 CLSPNQ9HAW4 1339 aa3.66□□□□□ -1.82
RGPD1-204ENST00000559485 CCER1Q8TC90 406 aaPredicted RBP3.66□□□□□ -1.82
RGPD1-204ENST00000559485 MYT1LQ9UL68 1186 aa3.65□□□□□ -1.82
RGPD1-204ENST00000559485 CCDC180Q9P1Z9 1646 aa3.65□□□□□ -1.83
RGPD1-204ENST00000559485 YTHDC1Q96MU7 727 aaKnown RBP3.64□□□□□ -1.83
RGPD1-204ENST00000559485 TRIM26Q12899 539 aaPredicted RBP3.6□□□□□ -1.83
RGPD1-204ENST00000559485 ZCCHC6Q5VYS8 1495 aaKnown RBP3.59□□□□□ -1.83
RGPD1-204ENST00000559485 DCAF8L2P0C7V8 631 aa3.59□□□□□ -1.84
RGPD1-204ENST00000559485 SUPT5HO00267 1087 aaKnown RBP3.57□□□□□ -1.84
RGPD1-204ENST00000559485 PCGF6Q9BYE7 350 aa3.56□□□□□ -1.84
RGPD1-204ENST00000559485 SHROOM4Q9ULL8 1493 aa3.55□□□□□ -1.84
RGPD1-204ENST00000559485 RANGAP1P46060 587 aaPredicted RBP3.53□□□□□ -1.84
RGPD1-204ENST00000559485 GLIPR1L2Q4G1C9 344 aa3.52□□□□□ -1.85
RGPD1-204ENST00000559485 ACIN1Q9UKV3 1341 aaKnown RBP3.51□□□□□ -1.85
RGPD1-204ENST00000559485 SENP3Q9H4L4 574 aaPredicted RBP3.5□□□□□ -1.85
RGPD1-204ENST00000559485 DAXXQ9UER7 740 aaPredicted RBP3.48□□□□□ -1.85
RGPD1-204ENST00000559485 BCL11AQ9H165 835 aa3.47□□□□□ -1.85
RGPD1-204ENST00000559485 ANP32EQ9BTT0 268 aa3.47□□□□□ -1.85
RGPD1-204ENST00000559485 APLP2Q06481 763 aa3.47□□□□□ -1.85
RGPD1-204ENST00000559485 MYO15BQ96JP2 1530 aa3.46□□□□□ -1.86
RGPD1-204ENST00000559485 ERICH6BQ5W0A0 696 aa3.46□□□□□ -1.86
RGPD1-204ENST00000559485 CSRNP3Q8WYN3 585 aa3.46□□□□□ -1.86
RGPD1-204ENST00000559485 NEFLP07196 543 aa3.45□□□□□ -1.86
RGPD1-204ENST00000559485 ABCC9O60706 1549 aa3.44□□□□□ -1.86
RGPD1-204ENST00000559485 SCAF1Q9H7N4 1312 aaKnown RBP3.44□□□□□ -1.86
RGPD1-204ENST00000559485 NCBP3Q53F19 620 aaKnown RBP3.43□□□□□ -1.86
RGPD1-204ENST00000559485 ZBTB22O15209 634 aa3.43□□□□□ -1.86
RGPD1-204ENST00000559485 GTF3C3Q9Y5Q9 886 aa3.43□□□□□ -1.86
RGPD1-204ENST00000559485 EIF5BO60841 1220 aaKnown RBP3.42□□□□□ -1.86
RGPD1-204ENST00000559485 PPARGC1BQ86YN6 1023 aaKnown RBP3.42□□□□□ -1.86
RGPD1-204ENST00000559485 EHMT2Q96KQ7 1210 aa3.42□□□□□ -1.86
RGPD1-204ENST00000559485 PLPPR3Q6T4P5 718 aa3.42□□□□□ -1.86
RGPD1-204ENST00000559485 TRIM41Q8WV44 630 aa3.42□□□□□ -1.86
RGPD1-204ENST00000559485 RB1CC1Q8TDY2 1594 aa3.42□□□□□ -1.86
RGPD1-204ENST00000559485 RTL5Q5HYW3 569 aaPredicted RBP3.41□□□□□ -1.86
RGPD1-204ENST00000559485 PRKCSHP14314 528 aaPredicted RBP3.4□□□□□ -1.86
RGPD1-204ENST00000559485 DIEXFQ68CQ4 756 aaKnown RBP3.4□□□□□ -1.86
RGPD1-204ENST00000559485 RTN4Q9NQC3 1192 aaKnown RBP3.4□□□□□ -1.86
RGPD1-204ENST00000559485 EEA1Q15075 1411 aa3.4□□□□□ -1.87
RGPD1-204ENST00000559485 AMER1Q5JTC6 1135 aaPredicted RBP3.39□□□□□ -1.87
RGPD1-204ENST00000559485 ZNF316A6NFI3 1004 aaPredicted RBP3.37□□□□□ -1.87
RGPD1-204ENST00000559485 KCNA4P22459 653 aa3.37□□□□□ -1.87
RGPD1-204ENST00000559485 FAM9AQ8IZU1 332 aaPredicted RBP3.37□□□□□ -1.87
RGPD1-204ENST00000559485 WRNQ14191 1432 aaPredicted RBP eCLIP3.37□□□□□ -1.87
RGPD1-204ENST00000559485 ZNF326Q5BKZ1 582 aaKnown RBP3.35□□□□□ -1.87
RGPD1-204ENST00000559485 NCLP19338 710 aaKnown RBP3.35□□□□□ -1.87
RGPD1-204ENST00000559485 CDK11AQ9UQ88 783 aaPredicted RBP3.34□□□□□ -1.88
RGPD1-204ENST00000559485 LOC105371045A0A1W2PR82 267 aa3.33□□□□□ -1.88
RGPD1-204ENST00000559485 NEUROD1Q13562 356 aa3.33□□□□□ -1.88
RGPD1-204ENST00000559485 NACADO15069 1562 aa3.33□□□□□ -1.88
RGPD1-204ENST00000559485 RSF1Q96T23 1441 aaPredicted RBP3.32□□□□□ -1.88
RGPD1-204ENST00000559485 DNAJC5Q9H3Z4 198 aa3.32□□□□□ -1.88
RGPD1-204ENST00000559485 SCRIBQ14160 1630 aa3.32□□□□□ -1.88
RGPD1-204ENST00000559485 TNIKQ9UKE5 1360 aa3.31□□□□□ -1.88
RGPD1-204ENST00000559485 UBE2Q2Q8WVN8 375 aa3.31□□□□□ -1.88
RGPD1-204ENST00000559485 GOLGA3Q08378 1498 aa3.31□□□□□ -1.88
RGPD1-204ENST00000559485 BAZ1AQ9NRL2 1556 aaPredicted RBP3.3□□□□□ -1.88
RGPD1-204ENST00000559485 PROM2Q8N271 834 aa3.3□□□□□ -1.88
RGPD1-204ENST00000559485 RSPH6AQ9H0K4 717 aa3.3□□□□□ -1.88
RGPD1-204ENST00000559485 BAZ1BQ9UIG0 1483 aaKnown RBP3.29□□□□□ -1.88
RGPD1-204ENST00000559485 ARID4BQ4LE39 1312 aaPredicted RBP3.29□□□□□ -1.88
RGPD1-204ENST00000559485 ANP32AP39687 249 aaKnown RBP3.29□□□□□ -1.88
RGPD1-204ENST00000559485 CEP162Q5TB80 1403 aa3.28□□□□□ -1.88
RGPD1-204ENST00000559485 CEP164Q9UPV0 1460 aa3.28□□□□□ -1.88
RGPD1-204ENST00000559485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.27□□□□□ -1.89
RGPD1-204ENST00000559485 ANP32BQ92688 251 aaKnown RBP3.27□□□□□ -1.89
RGPD1-204ENST00000559485 TOP2AP11388 1531 aaKnown RBP3.27□□□□□ -1.89
RGPD1-204ENST00000559485 PKNOX2Q96KN3 472 aa3.27□□□□□ -1.89
RGPD1-204ENST00000559485 ARXQ96QS3 562 aa3.27□□□□□ -1.89
RGPD1-204ENST00000559485 TNNT2P45379 298 aaPredicted RBP3.26□□□□□ -1.89
RGPD1-204ENST00000559485 KIF21BO75037 1637 aa3.26□□□□□ -1.89
RGPD1-204ENST00000559485 FOXD1Q16676 465 aa3.26□□□□□ -1.89
RGPD1-204ENST00000559485 TRIM44Q96DX7 344 aaPredicted RBP3.26□□□□□ -1.89
RGPD1-204ENST00000559485 DDRGK1Q96HY6 314 aa3.26□□□□□ -1.89
RGPD1-204ENST00000559485 FANCIQ9NVI1 1328 aa3.25□□□□□ -1.89
RGPD1-204ENST00000559485 PPM1GO15355 546 aaPredicted RBP3.25□□□□□ -1.89
RGPD1-204ENST00000559485 TIMELESSQ9UNS1 1208 aa3.25□□□□□ -1.89
RGPD1-204ENST00000559485 PPP6R1Q9UPN7 881 aa3.25□□□□□ -1.89
RGPD1-204ENST00000559485 PODXL2Q9NZ53 605 aa3.25□□□□□ -1.89
RGPD1-204ENST00000559485 POLR3GLQ9BT43 218 aa3.25□□□□□ -1.89
RGPD1-204ENST00000559485 USP35Q9P2H5 1018 aa3.24□□□□□ -1.89
RGPD1-204ENST00000559485 UBTFP17480 764 aaKnown RBP3.24□□□□□ -1.89
RGPD1-204ENST00000559485 DEKP35659 375 aaKnown RBP3.24□□□□□ -1.89
RGPD1-204ENST00000559485 SUPT16HQ9Y5B9 1047 aaKnown RBP3.24□□□□□ -1.89
RGPD1-204ENST00000559485 VPS8Q8N3P4 1428 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms