RNA–Protein interactions for RNA: ENST00000559070.5

RNF213-207, Transcript of ring finger protein 213, humanhuman

TSL 1 (best)

Gene RNF213, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-207ENST00000559070 KDM2AQ9Y2K7 1162 aa15.58■□□□□ 0.08
RNF213-207ENST00000559070 ARID4BQ4LE39 1312 aaPredicted RBP15.57■□□□□ 0.08
RNF213-207ENST00000559070 SENP3Q9H4L4 574 aaPredicted RBP15.55■□□□□ 0.08
RNF213-207ENST00000559070 SLC24A1O60721 1099 aa15.5■□□□□ 0.07
RNF213-207ENST00000559070 FANCD2Q9BXW9 1451 aa15.48■□□□□ 0.07
RNF213-207ENST00000559070 FHAD1B1AJZ9 1412 aa15.48■□□□□ 0.07
RNF213-207ENST00000559070 RGL3Q3MIN7 710 aa15.47■□□□□ 0.07
RNF213-207ENST00000559070 NEFMP07197 916 aa15.47■□□□□ 0.07
RNF213-207ENST00000559070 CARMIL2Q6F5E8 1435 aa15.46■□□□□ 0.07
RNF213-207ENST00000559070 CCNB3Q8WWL7 1395 aa15.44■□□□□ 0.06
RNF213-207ENST00000559070 PPP1R15AO75807 674 aaPredicted RBP15.44■□□□□ 0.06
RNF213-207ENST00000559070 JPH4Q96JJ6 628 aa15.42■□□□□ 0.06
RNF213-207ENST00000559070 NCAPD3P42695 1498 aa15.41■□□□□ 0.06
RNF213-207ENST00000559070 DDX10Q13206 875 aaKnown RBP15.4■□□□□ 0.06
RNF213-207ENST00000559070 MLECQ14165 292 aa15.37■□□□□ 0.05
RNF213-207ENST00000559070 HIRIP3Q9BW71 556 aaPredicted RBP15.37■□□□□ 0.05
RNF213-207ENST00000559070 CLSPNQ9HAW4 1339 aa15.37■□□□□ 0.05
RNF213-207ENST00000559070 KANK4Q5T7N3 995 aaPredicted RBP15.34■□□□□ 0.05
RNF213-207ENST00000559070 DAXXQ9UER7 740 aaPredicted RBP15.33■□□□□ 0.04
RNF213-207ENST00000559070 RAPGEF2Q9Y4G8 1499 aa15.32■□□□□ 0.04
RNF213-207ENST00000559070 C14orf37Q86TY3 774 aa15.32■□□□□ 0.04
RNF213-207ENST00000559070 CYB5RLQ6IPT4 315 aa15.31■□□□□ 0.04
RNF213-207ENST00000559070 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
RNF213-207ENST00000559070 VPS8Q8N3P4 1428 aa15.31■□□□□ 0.04
RNF213-207ENST00000559070 PLEKHG5O94827 1062 aa15.29■□□□□ 0.04
RNF213-207ENST00000559070 FMN1Q68DA7 1419 aa15.29■□□□□ 0.04
RNF213-207ENST00000559070 GGT6Q6P531 493 aa15.29■□□□□ 0.04
RNF213-207ENST00000559070 EFCAB2Q5VUJ9 269 aa15.29■□□□□ 0.04
RNF213-207ENST00000559070 SCAF1Q9H7N4 1312 aaKnown RBP15.29■□□□□ 0.04
RNF213-207ENST00000559070 ACIN1Q9UKV3 1341 aaKnown RBP15.29■□□□□ 0.04
RNF213-207ENST00000559070 EIF4G2P78344 907 aaKnown RBP eCLIP15.28■□□□□ 0.049e-9■■■□□ 15
RNF213-207ENST00000559070 CANXP27824 592 aaKnown RBP15.27■□□□□ 0.04
RNF213-207ENST00000559070 BCL11AQ9H165 835 aa15.27■□□□□ 0.03
RNF213-207ENST00000559070 FHOD3Q2V2M9 1422 aa15.27■□□□□ 0.03
RNF213-207ENST00000559070 RUSC2Q8N2Y8 1516 aa15.26■□□□□ 0.03
RNF213-207ENST00000559070 DNAJC5BQ9UF47 199 aa15.26■□□□□ 0.03
RNF213-207ENST00000559070 RAD54L2Q9Y4B4 1467 aa15.25■□□□□ 0.03
RNF213-207ENST00000559070 FGD5Q6ZNL6 1462 aa15.25■□□□□ 0.03
RNF213-207ENST00000559070 FAM9BQ8IZU0 186 aa15.24■□□□□ 0.03
RNF213-207ENST00000559070 SIN3AQ96ST3 1273 aa15.24■□□□□ 0.03
RNF213-207ENST00000559070 TMC1Q8TDI8 760 aa15.24■□□□□ 0.03
RNF213-207ENST00000559070 SALL2Q9Y467 1007 aaPredicted RBP15.24■□□□□ 0.03
RNF213-207ENST00000559070 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
RNF213-207ENST00000559070 NESP48681 1621 aa15.21■□□□□ 0.03
RNF213-207ENST00000559070 GAPVD1Q14C86 1478 aa15.21■□□□□ 0.03
RNF213-207ENST00000559070 CC2D2AQ9P2K1 1620 aa15.2■□□□□ 0.02
RNF213-207ENST00000559070 IGF1RP08069 1367 aa15.2■□□□□ 0.02
RNF213-207ENST00000559070 AQRO60306 1485 aaKnown RBP eCLIP15.19■□□□□ 0.023e-7■■■■□ 22.8
RNF213-207ENST00000559070 PTPRGP23470 1445 aa15.19■□□□□ 0.02
RNF213-207ENST00000559070 CARD11Q9BXL7 1154 aa15.19■□□□□ 0.02
RNF213-207ENST00000559070 ARHGAP35Q9NRY4 1499 aa15.18■□□□□ 0.02
RNF213-207ENST00000559070 HNRNPUQ00839 825 aaKnown RBP eCLIP15.18■□□□□ 0.02
RNF213-207ENST00000559070 KANK1Q14678 1352 aa15.17■□□□□ 0.02
RNF213-207ENST00000559070 HNRNPMP52272 730 aaKnown RBP eCLIP15.16■□□□□ 0.022e-10■■■■■ 35.6
RNF213-207ENST00000559070 ZBTB7CA1YPR0 619 aa15.16■□□□□ 0.02
RNF213-207ENST00000559070 MRS2Q9HD23 443 aa15.14■□□□□ 0.01
RNF213-207ENST00000559070 POGKQ9P215 609 aa15.14■□□□□ 0.01
RNF213-207ENST00000559070 DCAF11Q8TEB1 546 aa15.14■□□□□ 0.01
RNF213-207ENST00000559070 CFTRP13569 1480 aa15.13■□□□□ 0.01
RNF213-207ENST00000559070 KIF3BO15066 747 aa15.13■□□□□ 0.01
RNF213-207ENST00000559070 PKD2Q13563 968 aa15.13■□□□□ 0.01
RNF213-207ENST00000559070 WDR43Q15061 677 aaKnown RBP eCLIP15.12■□□□□ 0.01
RNF213-207ENST00000559070 FOXD1Q16676 465 aa15.12■□□□□ 0.01
RNF213-207ENST00000559070 A0A0G2JS52 829 aa15.1■□□□□ 0.01
RNF213-207ENST00000559070 SPAG9O60271 1321 aaKnown RBP15.1■□□□□ 0.01
RNF213-207ENST00000559070 GTF3C3Q9Y5Q9 886 aa15.1■□□□□ 0.01
RNF213-207ENST00000559070 CDCA8Q53HL2 280 aa15.09■□□□□ 0.01
RNF213-207ENST00000559070 LMOD2Q6P5Q4 547 aa15.09■□□□□ 0.01
RNF213-207ENST00000559070 HAP1P54257 671 aaPredicted RBP15.08■□□□□ 0
RNF213-207ENST00000559070 NUP155O75694 1391 aa15.07■□□□□ 0
RNF213-207ENST00000559070 HDGFP51858 240 aaKnown RBP15.07■□□□□ 0
RNF213-207ENST00000559070 ANKRD30AQ9BXX3 1397 aa15.06■□□□□ 0
RNF213-207ENST00000559070 BICRAQ9NZM4 1560 aa15.06■□□□□ 0
RNF213-207ENST00000559070 SETD5Q9C0A6 1442 aa15.06■□□□□ 0
RNF213-207ENST00000559070 PPM1GO15355 546 aaPredicted RBP15.05■□□□□ 0
RNF213-207ENST00000559070 CCDC18Q5T9S5 1454 aa15.05■□□□□ -0
RNF213-207ENST00000559070 RSPH4AQ5TD94 716 aa15.05■□□□□ -0
RNF213-207ENST00000559070 KNSTRNQ9Y448 316 aa15.05■□□□□ -0
RNF213-207ENST00000559070 SAFB2Q14151 953 aaKnown RBP eCLIP15.04■□□□□ -0
RNF213-207ENST00000559070 HMGXB3Q12766 1538 aa15.03■□□□□ -0
RNF213-207ENST00000559070 MPHOSPH9Q99550 1183 aa15.02■□□□□ -0
RNF213-207ENST00000559070 WASHC2CQ9Y4E1 1318 aa15.01□□□□□ -0.01
RNF213-207ENST00000559070 MIER1Q8N108 512 aa15.01□□□□□ -0.01
RNF213-207ENST00000559070 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
RNF213-207ENST00000559070 GRIN2BQ13224 1484 aa15.01□□□□□ -0.01
RNF213-207ENST00000559070 STK26Q9P289 416 aa15□□□□□ -0.01
RNF213-207ENST00000559070 FAM69CQ0P6D2 419 aa15□□□□□ -0.01
RNF213-207ENST00000559070 RAB3GAP2Q9H2M9 1393 aa14.98□□□□□ -0.01
RNF213-207ENST00000559070 SENP3-EIF4A1A0A087X0R7 540 aa14.98□□□□□ -0.01
RNF213-207ENST00000559070 TNNT2P45379 298 aaPredicted RBP14.96□□□□□ -0.01
RNF213-207ENST00000559070 TOPBP1Q92547 1522 aa14.96□□□□□ -0.02
RNF213-207ENST00000559070 SRPK2P78362 688 aaKnown RBP14.96□□□□□ -0.02
RNF213-207ENST00000559070 CFAP53Q96M91 514 aa14.95□□□□□ -0.02
RNF213-207ENST00000559070 NPM2Q86SE8 214 aaKnown RBP14.94□□□□□ -0.02
RNF213-207ENST00000559070 TIMELESSQ9UNS1 1208 aa14.93□□□□□ -0.02
RNF213-207ENST00000559070 POLA1P09884 1462 aaPredicted RBP14.93□□□□□ -0.02
RNF213-207ENST00000559070 TMF1P82094 1093 aa14.93□□□□□ -0.02
RNF213-207ENST00000559070 IFT140Q96RY7 1462 aa14.92□□□□□ -0.02
RNF213-207ENST00000559070 NUTM2DQ5VT03 806 aaPredicted RBP14.91□□□□□ -0.02
RNF213-207ENST00000559070 SOX12O15370 315 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms