RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 CNKSR2Q8WXI2 1034 aa7.95□□□□□ -1.14
GABPB1-207ENST00000558335 CUX2O14529 1486 aa7.94□□□□□ -1.14
GABPB1-207ENST00000558335 RRBP1Q9P2E9 1410 aaKnown RBP7.93□□□□□ -1.14
GABPB1-207ENST00000558335 DCAF8L1A6NGE4 600 aa7.92□□□□□ -1.14
GABPB1-207ENST00000558335 FHAD1B1AJZ9 1412 aa7.92□□□□□ -1.14
GABPB1-207ENST00000558335 ERICH6BQ5W0A0 696 aa7.91□□□□□ -1.14
GABPB1-207ENST00000558335 GTF3C3Q9Y5Q9 886 aa7.91□□□□□ -1.14
GABPB1-207ENST00000558335 CUX1P39880 1505 aa7.91□□□□□ -1.14
GABPB1-207ENST00000558335 RNF216Q9NWF9 866 aaPredicted RBP7.9□□□□□ -1.14
GABPB1-207ENST00000558335 TIMELESSQ9UNS1 1208 aa7.9□□□□□ -1.14
GABPB1-207ENST00000558335 ARAP1Q96P48 1450 aa7.89□□□□□ -1.15
GABPB1-207ENST00000558335 EFCAB5A4FU69 1503 aa7.88□□□□□ -1.15
GABPB1-207ENST00000558335 CACNB1Q02641 598 aaPredicted RBP7.88□□□□□ -1.15
GABPB1-207ENST00000558335 HNRNPUL2Q1KMD3 747 aaKnown RBP7.88□□□□□ -1.15
GABPB1-207ENST00000558335 CC2D2AQ9P2K1 1620 aa7.88□□□□□ -1.15
GABPB1-207ENST00000558335 CUL7Q14999 1698 aa7.87□□□□□ -1.15
GABPB1-207ENST00000558335 NCBP3Q53F19 620 aaKnown RBP7.87□□□□□ -1.15
GABPB1-207ENST00000558335 ARXQ96QS3 562 aa7.87□□□□□ -1.15
GABPB1-207ENST00000558335 CCNB3Q8WWL7 1395 aa7.86□□□□□ -1.15
GABPB1-207ENST00000558335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.86□□□□□ -1.15
GABPB1-207ENST00000558335 CADPSQ9ULU8 1353 aa7.86□□□□□ -1.15
GABPB1-207ENST00000558335 NEUROD1Q13562 356 aa7.86□□□□□ -1.15
GABPB1-207ENST00000558335 TIAM1Q13009 1591 aa7.85□□□□□ -1.15
GABPB1-207ENST00000558335 CFAP43Q8NDM7 1665 aa7.85□□□□□ -1.15
GABPB1-207ENST00000558335 AQRO60306 1485 aaKnown RBP eCLIP7.84□□□□□ -1.15
GABPB1-207ENST00000558335 DHX57Q6P158 1386 aaKnown RBP7.84□□□□□ -1.16
GABPB1-207ENST00000558335 ARHGAP35Q9NRY4 1499 aa7.83□□□□□ -1.16
GABPB1-207ENST00000558335 DNMBPQ6XZF7 1577 aa7.83□□□□□ -1.16
GABPB1-207ENST00000558335 KIF21AQ7Z4S6 1674 aa7.83□□□□□ -1.16
GABPB1-207ENST00000558335 FYCO1Q9BQS8 1478 aa7.82□□□□□ -1.16
GABPB1-207ENST00000558335 CARMIL1Q5VZK9 1371 aa7.82□□□□□ -1.16
GABPB1-207ENST00000558335 RNF39Q9H2S5 420 aa7.81□□□□□ -1.16
GABPB1-207ENST00000558335 CTTNBP2Q8WZ74 1663 aa7.81□□□□□ -1.16
GABPB1-207ENST00000558335 IGF1RP08069 1367 aa7.81□□□□□ -1.16
GABPB1-207ENST00000558335 FGD5Q6ZNL6 1462 aa7.8□□□□□ -1.16
GABPB1-207ENST00000558335 LRRC9Q6ZRR7 1453 aa7.8□□□□□ -1.16
GABPB1-207ENST00000558335 THOC2Q8NI27 1593 aaKnown RBP7.8□□□□□ -1.16
GABPB1-207ENST00000558335 FMN1Q68DA7 1419 aa7.79□□□□□ -1.16
GABPB1-207ENST00000558335 ABCA10Q8WWZ4 1543 aa7.79□□□□□ -1.16
GABPB1-207ENST00000558335 LAMC3Q9Y6N6 1575 aa7.79□□□□□ -1.16
GABPB1-207ENST00000558335 SETD5Q9C0A6 1442 aa7.78□□□□□ -1.16
GABPB1-207ENST00000558335 CASKIN1Q8WXD9 1431 aa7.77□□□□□ -1.17
GABPB1-207ENST00000558335 FANCD2Q9BXW9 1451 aa7.76□□□□□ -1.17
GABPB1-207ENST00000558335 NEFLP07196 543 aa7.76□□□□□ -1.17
GABPB1-207ENST00000558335 MIER1Q8N108 512 aa7.76□□□□□ -1.17
GABPB1-207ENST00000558335 PODXL2Q9NZ53 605 aa7.75□□□□□ -1.17
GABPB1-207ENST00000558335 DNAJC5BQ9UF47 199 aa7.75□□□□□ -1.17
GABPB1-207ENST00000558335 KANK4Q5T7N3 995 aaPredicted RBP7.73□□□□□ -1.17
GABPB1-207ENST00000558335 RAB3GAP2Q9H2M9 1393 aa7.72□□□□□ -1.17
GABPB1-207ENST00000558335 PCF11O94913 1555 aaKnown RBP7.72□□□□□ -1.17
GABPB1-207ENST00000558335 WDR97A6NE52 1622 aa7.72□□□□□ -1.17
GABPB1-207ENST00000558335 CCDC18Q5T9S5 1454 aa7.72□□□□□ -1.17
GABPB1-207ENST00000558335 TOPBP1Q92547 1522 aa7.72□□□□□ -1.17
GABPB1-207ENST00000558335 C1QBPQ07021 282 aaKnown RBP7.71□□□□□ -1.18
GABPB1-207ENST00000558335 SUPT6HQ7KZ85 1726 aaKnown RBP7.71□□□□□ -1.18
GABPB1-207ENST00000558335 PDS5BQ9NTI5 1447 aa7.7□□□□□ -1.18
GABPB1-207ENST00000558335 EHBP1L1Q8N3D4 1523 aa7.7□□□□□ -1.18
GABPB1-207ENST00000558335 PKNOX2Q96KN3 472 aa7.7□□□□□ -1.18
GABPB1-207ENST00000558335 YTHDC1Q96MU7 727 aaKnown RBP7.7□□□□□ -1.18
GABPB1-207ENST00000558335 SAMD9Q5K651 1589 aa7.7□□□□□ -1.18
GABPB1-207ENST00000558335 POLA1P09884 1462 aaPredicted RBP7.69□□□□□ -1.18
GABPB1-207ENST00000558335 CCER2I3L3R5 266 aa7.69□□□□□ -1.18
GABPB1-207ENST00000558335 ABCA5Q8WWZ7 1642 aa7.68□□□□□ -1.18
GABPB1-207ENST00000558335 GLIPR1L2Q4G1C9 344 aa7.68□□□□□ -1.18
GABPB1-207ENST00000558335 AKNAQ7Z591 1439 aa7.68□□□□□ -1.18
GABPB1-207ENST00000558335 MAPKBP1O60336 1514 aa7.68□□□□□ -1.18
GABPB1-207ENST00000558335 MTUS2Q5JR59 1369 aa7.67□□□□□ -1.18
GABPB1-207ENST00000558335 HFM1A2PYH4 1435 aa7.67□□□□□ -1.18
GABPB1-207ENST00000558335 FGD6Q6ZV73 1430 aa7.67□□□□□ -1.18
GABPB1-207ENST00000558335 HECW1Q76N89 1606 aa7.67□□□□□ -1.18
GABPB1-207ENST00000558335 FAM50AQ14320 339 aaKnown RBP7.66□□□□□ -1.18
GABPB1-207ENST00000558335 UACAQ9BZF9 1416 aa7.66□□□□□ -1.18
GABPB1-207ENST00000558335 PHLDB1Q86UU1 1377 aa7.65□□□□□ -1.18
GABPB1-207ENST00000558335 TONSLQ96HA7 1378 aa7.65□□□□□ -1.18
GABPB1-207ENST00000558335 GAPVD1Q14C86 1478 aa7.64□□□□□ -1.19
GABPB1-207ENST00000558335 MYOM3Q5VTT5 1437 aa7.64□□□□□ -1.19
GABPB1-207ENST00000558335 ANP32CO43423 234 aa7.64□□□□□ -1.19
GABPB1-207ENST00000558335 NPM3O75607 178 aaKnown RBP7.64□□□□□ -1.19
GABPB1-207ENST00000558335 GCC2Q8IWJ2 1684 aa7.63□□□□□ -1.19
GABPB1-207ENST00000558335 SNAPC4Q5SXM2 1469 aa7.63□□□□□ -1.19
GABPB1-207ENST00000558335 MIA2Q96PC5 1412 aa7.63□□□□□ -1.19
GABPB1-207ENST00000558335 PTPN23Q9H3S7 1636 aa7.63□□□□□ -1.19
GABPB1-207ENST00000558335 GRIN2BQ13224 1484 aa7.62□□□□□ -1.19
GABPB1-207ENST00000558335 ITGAEP38570 1179 aa7.62□□□□□ -1.19
GABPB1-207ENST00000558335 ANO8Q9HCE9 1232 aaPredicted RBP7.62□□□□□ -1.19
GABPB1-207ENST00000558335 TCOF1Q13428 1488 aaKnown RBP7.62□□□□□ -1.19
GABPB1-207ENST00000558335 FHOD3Q2V2M9 1422 aa7.61□□□□□ -1.19
GABPB1-207ENST00000558335 PPP1R15AO75807 674 aaPredicted RBP7.61□□□□□ -1.19
GABPB1-207ENST00000558335 UGGT2Q9NYU1 1516 aa7.6□□□□□ -1.19
GABPB1-207ENST00000558335 NCOA2Q15596 1464 aa7.6□□□□□ -1.19
GABPB1-207ENST00000558335 RAD54L2Q9Y4B4 1467 aa7.6□□□□□ -1.19
GABPB1-207ENST00000558335 PBRM1Q86U86 1689 aa7.6□□□□□ -1.19
GABPB1-207ENST00000558335 IQGAP2Q13576 1575 aa7.59□□□□□ -1.19
GABPB1-207ENST00000558335 ARHGEF11O15085 1522 aa7.59□□□□□ -1.19
GABPB1-207ENST00000558335 ATP1B4Q9UN42 357 aaPredicted RBP7.59□□□□□ -1.19
GABPB1-207ENST00000558335 URB2Q14146 1524 aaKnown RBP7.58□□□□□ -1.2
GABPB1-207ENST00000558335 CDK11AQ9UQ88 783 aaPredicted RBP7.58□□□□□ -1.2
GABPB1-207ENST00000558335 SUPT16HQ9Y5B9 1047 aaKnown RBP7.58□□□□□ -1.2
GABPB1-207ENST00000558335 TARBP1Q13395 1621 aaKnown RBP7.57□□□□□ -1.2
GABPB1-207ENST00000558335 PLEKHG5O94827 1062 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms