RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 FHAD1B1AJZ9 1412 aa15.95■□□□□ 0.14
NEK9-210ENST00000557026 CFDP1Q9UEE9 299 aaPredicted RBP15.95■□□□□ 0.14
NEK9-210ENST00000557026 PLPPR3Q6T4P5 718 aa15.95■□□□□ 0.14
NEK9-210ENST00000557026 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
NEK9-210ENST00000557026 TMC1Q8TDI8 760 aa15.93■□□□□ 0.14
NEK9-210ENST00000557026 CARMIL2Q6F5E8 1435 aa15.92■□□□□ 0.14
NEK9-210ENST00000557026 CHMP4BQ9H444 224 aaKnown RBP15.92■□□□□ 0.14
NEK9-210ENST00000557026 KCNH8Q96L42 1107 aa15.91■□□□□ 0.14
NEK9-210ENST00000557026 PNNQ9H307 717 aaKnown RBP15.91■□□□□ 0.14
NEK9-210ENST00000557026 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
NEK9-210ENST00000557026 HSP90AA1P07900 732 aaKnown RBP15.9■□□□□ 0.14
NEK9-210ENST00000557026 SMARCA2P51531 1590 aa15.89■□□□□ 0.13
NEK9-210ENST00000557026 EIF4G2P78344 907 aaKnown RBP eCLIP15.88■□□□□ 0.13
NEK9-210ENST00000557026 CHIC2Q9UKJ5 165 aa15.87■□□□□ 0.13
NEK9-210ENST00000557026 NUDCQ9Y266 331 aa15.84■□□□□ 0.13
NEK9-210ENST00000557026 CDK11BP21127 795 aaKnown RBP15.83■□□□□ 0.12
NEK9-210ENST00000557026 CHMP4AQ9BY43 222 aa15.82■□□□□ 0.12
NEK9-210ENST00000557026 CCNB3Q8WWL7 1395 aa15.81■□□□□ 0.12
NEK9-210ENST00000557026 MYO15BQ96JP2 1530 aa15.8■□□□□ 0.12
NEK9-210ENST00000557026 TNIKQ9UKE5 1360 aa15.8■□□□□ 0.12
NEK9-210ENST00000557026 MS4A1P11836 297 aa15.79■□□□□ 0.12
NEK9-210ENST00000557026 KDM2AQ9Y2K7 1162 aa15.76■□□□□ 0.11
NEK9-210ENST00000557026 POGKQ9P215 609 aa15.76■□□□□ 0.11
NEK9-210ENST00000557026 CEP162Q5TB80 1403 aa15.75■□□□□ 0.11
NEK9-210ENST00000557026 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
NEK9-210ENST00000557026 KNSTRNQ9Y448 316 aa15.75■□□□□ 0.11
NEK9-210ENST00000557026 TIMELESSQ9UNS1 1208 aa15.74■□□□□ 0.11
NEK9-210ENST00000557026 A0A0G2JS52 829 aa15.73■□□□□ 0.11
NEK9-210ENST00000557026 RSPH4AQ5TD94 716 aa15.73■□□□□ 0.11
NEK9-210ENST00000557026 ANP32EQ9BTT0 268 aa15.72■□□□□ 0.11
NEK9-210ENST00000557026 CARMIL1Q5VZK9 1371 aa15.71■□□□□ 0.11
NEK9-210ENST00000557026 HNRNPUQ00839 825 aaKnown RBP eCLIP15.71■□□□□ 0.11
NEK9-210ENST00000557026 MAPK8IP3Q9UPT6 1336 aa15.7■□□□□ 0.1
NEK9-210ENST00000557026 BCL11AQ9H165 835 aa15.7■□□□□ 0.1
NEK9-210ENST00000557026 CASC1Q6TDU7 716 aa15.7■□□□□ 0.1
NEK9-210ENST00000557026 MRS2Q9HD23 443 aa15.69■□□□□ 0.1
NEK9-210ENST00000557026 ABCC8Q09428 1581 aa15.69■□□□□ 0.1
NEK9-210ENST00000557026 EFCAB2Q5VUJ9 269 aa15.68■□□□□ 0.1
NEK9-210ENST00000557026 CFAP44Q96MT7 982 aa15.68■□□□□ 0.1
NEK9-210ENST00000557026 RRP7BPQ9NSQ0 103 aa15.67■□□□□ 0.1
NEK9-210ENST00000557026 ZBTB7CA1YPR0 619 aa15.65■□□□□ 0.1
NEK9-210ENST00000557026 CUX2O14529 1486 aa15.65■□□□□ 0.1
NEK9-210ENST00000557026 FAM9BQ8IZU0 186 aa15.64■□□□□ 0.1
NEK9-210ENST00000557026 NCLP19338 710 aaKnown RBP15.64■□□□□ 0.09
NEK9-210ENST00000557026 FMN1Q68DA7 1419 aa15.64■□□□□ 0.09
NEK9-210ENST00000557026 CCDC136Q96JN2 1154 aa15.62■□□□□ 0.09
NEK9-210ENST00000557026 CARD11Q9BXL7 1154 aa15.61■□□□□ 0.09
NEK9-210ENST00000557026 DDX10Q13206 875 aaKnown RBP15.61■□□□□ 0.09
NEK9-210ENST00000557026 BECN1Q14457 450 aa15.61■□□□□ 0.09
NEK9-210ENST00000557026 NPHP1O15259 732 aa15.6■□□□□ 0.09
NEK9-210ENST00000557026 TMF1P82094 1093 aa15.59■□□□□ 0.09
NEK9-210ENST00000557026 HDAC5Q9UQL6 1122 aa15.58■□□□□ 0.09
NEK9-210ENST00000557026 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
NEK9-210ENST00000557026 GOLGA6L22H0YM25 854 aa15.57■□□□□ 0.08
NEK9-210ENST00000557026 CALD1Q05682 793 aaKnown RBP15.57■□□□□ 0.08
NEK9-210ENST00000557026 DDRGK1Q96HY6 314 aa15.57■□□□□ 0.08
NEK9-210ENST00000557026 SOGA1O94964 1423 aa15.57■□□□□ 0.08
NEK9-210ENST00000557026 EID1Q9Y6B2 187 aa15.55■□□□□ 0.08
NEK9-210ENST00000557026 RGL3Q3MIN7 710 aa15.55■□□□□ 0.08
NEK9-210ENST00000557026 HDGFL2Q7Z4V5 671 aaPredicted RBP15.54■□□□□ 0.08
NEK9-210ENST00000557026 ZRSR1Q15695 479 aaKnown RBP15.53■□□□□ 0.08
NEK9-210ENST00000557026 GTF3C3Q9Y5Q9 886 aa15.53■□□□□ 0.08
NEK9-210ENST00000557026 EIF3AQ14152 1382 aaKnown RBP15.53■□□□□ 0.08
NEK9-210ENST00000557026 CADPSQ9ULU8 1353 aa15.53■□□□□ 0.08
NEK9-210ENST00000557026 LMOD2Q6P5Q4 547 aa15.52■□□□□ 0.08
NEK9-210ENST00000557026 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.08
NEK9-210ENST00000557026 TMX4Q9H1E5 349 aaPredicted RBP15.52■□□□□ 0.07
NEK9-210ENST00000557026 ANKRD30AQ9BXX3 1397 aa15.51■□□□□ 0.07
NEK9-210ENST00000557026 FTSJ3Q8IY81 847 aaKnown RBP15.5■□□□□ 0.07
NEK9-210ENST00000557026 ARHGAP35Q9NRY4 1499 aa15.49■□□□□ 0.07
NEK9-210ENST00000557026 GOLGA2Q08379 1002 aa15.49■□□□□ 0.07
NEK9-210ENST00000557026 ARXQ96QS3 562 aa15.47■□□□□ 0.07
NEK9-210ENST00000557026 FKBP8Q14318 412 aa15.44■□□□□ 0.06
NEK9-210ENST00000557026 CCDC18Q5T9S5 1454 aa15.44■□□□□ 0.06
NEK9-210ENST00000557026 RTF1Q92541 710 aaKnown RBP15.43■□□□□ 0.06
NEK9-210ENST00000557026 UACAQ9BZF9 1416 aa15.43■□□□□ 0.06
NEK9-210ENST00000557026 PPM1GO15355 546 aaPredicted RBP15.43■□□□□ 0.06
NEK9-210ENST00000557026 SRPK2P78362 688 aaKnown RBP15.42■□□□□ 0.06
NEK9-210ENST00000557026 SALL2Q9Y467 1007 aaPredicted RBP15.4■□□□□ 0.06
NEK9-210ENST00000557026 TOP2AP11388 1531 aaKnown RBP15.4■□□□□ 0.06
NEK9-210ENST00000557026 OS9Q13438 667 aaPredicted RBP15.39■□□□□ 0.05
NEK9-210ENST00000557026 GGT6Q6P531 493 aa15.38■□□□□ 0.05
NEK9-210ENST00000557026 OSCARQ8IYS5 282 aa15.38■□□□□ 0.05
NEK9-210ENST00000557026 IPO8O15397 1037 aaKnown RBP15.38■□□□□ 0.05
NEK9-210ENST00000557026 MLECQ14165 292 aa15.38■□□□□ 0.05
NEK9-210ENST00000557026 TERF2IPQ9NYB0 399 aa15.38■□□□□ 0.05
NEK9-210ENST00000557026 ANO8Q9HCE9 1232 aaPredicted RBP15.37■□□□□ 0.05
NEK9-210ENST00000557026 SPAG9O60271 1321 aaKnown RBP15.37■□□□□ 0.05
NEK9-210ENST00000557026 NRDCO43847 1150 aa15.37■□□□□ 0.05
NEK9-210ENST00000557026 GOLGA6L6A8MZA4 724 aa15.36■□□□□ 0.05
NEK9-210ENST00000557026 MORC1Q86VD1 984 aa15.36■□□□□ 0.05
NEK9-210ENST00000557026 RAPGEF2Q9Y4G8 1499 aa15.36■□□□□ 0.05
NEK9-210ENST00000557026 VPS8Q8N3P4 1428 aa15.36■□□□□ 0.05
NEK9-210ENST00000557026 STAC3Q96MF2 364 aa15.36■□□□□ 0.05
NEK9-210ENST00000557026 MCCP23508 829 aa15.35■□□□□ 0.05
NEK9-210ENST00000557026 LMOD3Q0VAK6 560 aa15.34■□□□□ 0.05
NEK9-210ENST00000557026 AEBP2Q6ZN18 517 aaPredicted RBP15.34■□□□□ 0.05
NEK9-210ENST00000557026 SETD5Q9C0A6 1442 aa15.33■□□□□ 0.05
NEK9-210ENST00000557026 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.05
NEK9-210ENST00000557026 DCAF11Q8TEB1 546 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms