RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 FHAD1B1AJZ9 1412 aa15.54■□□□□ 0.08
MTHFD1-210ENST00000555252 CCNB3Q8WWL7 1395 aa15.53■□□□□ 0.08
MTHFD1-210ENST00000555252 TIAM1Q13009 1591 aa15.53■□□□□ 0.08
MTHFD1-210ENST00000555252 POLA1P09884 1462 aaPredicted RBP15.53■□□□□ 0.08
MTHFD1-210ENST00000555252 CUL7Q14999 1698 aa15.52■□□□□ 0.08
MTHFD1-210ENST00000555252 DHX57Q6P158 1386 aaKnown RBP15.5■□□□□ 0.07
MTHFD1-210ENST00000555252 EFCAB5A4FU69 1503 aa15.49■□□□□ 0.07
MTHFD1-210ENST00000555252 SUPT16HQ9Y5B9 1047 aaKnown RBP15.48■□□□□ 0.07
MTHFD1-210ENST00000555252 RAD54L2Q9Y4B4 1467 aa15.48■□□□□ 0.07
MTHFD1-210ENST00000555252 LRRC9Q6ZRR7 1453 aa15.46■□□□□ 0.07
MTHFD1-210ENST00000555252 CFAP43Q8NDM7 1665 aa15.45■□□□□ 0.06
MTHFD1-210ENST00000555252 AQRO60306 1485 aaKnown RBP eCLIP15.45■□□□□ 0.065e-9■■■■■ 48.4
MTHFD1-210ENST00000555252 WDR97A6NE52 1622 aa15.44■□□□□ 0.06
MTHFD1-210ENST00000555252 PDS5BQ9NTI5 1447 aa15.43■□□□□ 0.06
MTHFD1-210ENST00000555252 CTTNBP2Q8WZ74 1663 aa15.42■□□□□ 0.06
MTHFD1-210ENST00000555252 FYCO1Q9BQS8 1478 aa15.42■□□□□ 0.06
MTHFD1-210ENST00000555252 URB2Q14146 1524 aaKnown RBP15.42■□□□□ 0.06
MTHFD1-210ENST00000555252 PCF11O94913 1555 aaKnown RBP15.41■□□□□ 0.06
MTHFD1-210ENST00000555252 CASKIN1Q8WXD9 1431 aa15.39■□□□□ 0.05
MTHFD1-210ENST00000555252 ANP32EQ9BTT0 268 aa15.39■□□□□ 0.05
MTHFD1-210ENST00000555252 ABCA5Q8WWZ7 1642 aa15.38■□□□□ 0.05
MTHFD1-210ENST00000555252 FMN1Q68DA7 1419 aa15.37■□□□□ 0.05
MTHFD1-210ENST00000555252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.36■□□□□ 0.05
MTHFD1-210ENST00000555252 FHOD3Q2V2M9 1422 aa15.35■□□□□ 0.05
MTHFD1-210ENST00000555252 TSHZ2Q9NRE2 1034 aa15.35■□□□□ 0.05
MTHFD1-210ENST00000555252 GAPVD1Q14C86 1478 aa15.34■□□□□ 0.05
MTHFD1-210ENST00000555252 PHLDB1Q86UU1 1377 aa15.34■□□□□ 0.05
MTHFD1-210ENST00000555252 SETD5Q9C0A6 1442 aa15.33■□□□□ 0.05
MTHFD1-210ENST00000555252 RAB3GAP2Q9H2M9 1393 aa15.32■□□□□ 0.04
MTHFD1-210ENST00000555252 P3H3Q8IVL6 736 aa15.31■□□□□ 0.04
MTHFD1-210ENST00000555252 SAMD9Q5K651 1589 aa15.31■□□□□ 0.04
MTHFD1-210ENST00000555252 KIF21AQ7Z4S6 1674 aa15.3■□□□□ 0.04
MTHFD1-210ENST00000555252 ITGAEP38570 1179 aa15.29■□□□□ 0.04
MTHFD1-210ENST00000555252 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
MTHFD1-210ENST00000555252 THOC2Q8NI27 1593 aaKnown RBP15.28■□□□□ 0.04
MTHFD1-210ENST00000555252 SNAPC4Q5SXM2 1469 aa15.28■□□□□ 0.04
MTHFD1-210ENST00000555252 ATP1B4Q9UN42 357 aaPredicted RBP15.26■□□□□ 0.03
MTHFD1-210ENST00000555252 TARBP1Q13395 1621 aaKnown RBP15.26■□□□□ 0.03
MTHFD1-210ENST00000555252 FAM50AQ14320 339 aaKnown RBP15.25■□□□□ 0.03
MTHFD1-210ENST00000555252 MAPKBP1O60336 1514 aa15.24■□□□□ 0.03
MTHFD1-210ENST00000555252 TIMELESSQ9UNS1 1208 aa15.22■□□□□ 0.03
MTHFD1-210ENST00000555252 ERCC6Q03468 1493 aa15.22■□□□□ 0.03
MTHFD1-210ENST00000555252 GRIN2BQ13224 1484 aa15.21■□□□□ 0.03
MTHFD1-210ENST00000555252 FGD6Q6ZV73 1430 aa15.21■□□□□ 0.02
MTHFD1-210ENST00000555252 MTUS2Q5JR59 1369 aa15.2■□□□□ 0.02
MTHFD1-210ENST00000555252 MRC2Q9UBG0 1479 aa15.19■□□□□ 0.02
MTHFD1-210ENST00000555252 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
MTHFD1-210ENST00000555252 EHBP1L1Q8N3D4 1523 aa15.18■□□□□ 0.02
MTHFD1-210ENST00000555252 CCDC18Q5T9S5 1454 aa15.17■□□□□ 0.02
MTHFD1-210ENST00000555252 SUPT6HQ7KZ85 1726 aaKnown RBP15.16■□□□□ 0.02
MTHFD1-210ENST00000555252 ADAMTS12P58397 1594 aa15.14■□□□□ 0.01
MTHFD1-210ENST00000555252 MYOM3Q5VTT5 1437 aa15.14■□□□□ 0.01
MTHFD1-210ENST00000555252 NCOA2Q15596 1464 aa15.13■□□□□ 0.01
MTHFD1-210ENST00000555252 LRRIQ1Q96JM4 1722 aa15.13■□□□□ 0.01
MTHFD1-210ENST00000555252 IQGAP2Q13576 1575 aa15.13■□□□□ 0.01
MTHFD1-210ENST00000555252 BCL11AQ9H165 835 aa15.12■□□□□ 0.01
MTHFD1-210ENST00000555252 HECW1Q76N89 1606 aa15.12■□□□□ 0.01
MTHFD1-210ENST00000555252 HFM1A2PYH4 1435 aa15.11■□□□□ 0.01
MTHFD1-210ENST00000555252 IFT140Q96RY7 1462 aa15.11■□□□□ 0.01
MTHFD1-210ENST00000555252 ARHGEF11O15085 1522 aa15.1■□□□□ 0.01
MTHFD1-210ENST00000555252 UGGT2Q9NYU1 1516 aa15.1■□□□□ 0.01
MTHFD1-210ENST00000555252 WDR62O43379 1518 aa15.09■□□□□ 0.01
MTHFD1-210ENST00000555252 CCER2I3L3R5 266 aa15.09■□□□□ 0.01
MTHFD1-210ENST00000555252 NEFLP07196 543 aa15.08■□□□□ 0
MTHFD1-210ENST00000555252 UACAQ9BZF9 1416 aa15.07■□□□□ 0
MTHFD1-210ENST00000555252 PTPN23Q9H3S7 1636 aa15.07■□□□□ 0
MTHFD1-210ENST00000555252 TCOF1Q13428 1488 aaKnown RBP15.06■□□□□ 0
MTHFD1-210ENST00000555252 FKBP8Q14318 412 aa15.04■□□□□ -0
MTHFD1-210ENST00000555252 SIN3AQ96ST3 1273 aa15.04■□□□□ -0
MTHFD1-210ENST00000555252 EPRSP07814 1512 aaKnown RBP15.04■□□□□ -0
MTHFD1-210ENST00000555252 NAIPQ13075 1403 aa15.03■□□□□ -0
MTHFD1-210ENST00000555252 PTPRKQ15262 1439 aa15.03■□□□□ -0
MTHFD1-210ENST00000555252 MIA2Q96PC5 1412 aa15.03■□□□□ -0
MTHFD1-210ENST00000555252 AKNAQ7Z591 1439 aa15.02□□□□□ -0.01
MTHFD1-210ENST00000555252 PPP1R15AO75807 674 aaPredicted RBP15.02□□□□□ -0.01
MTHFD1-210ENST00000555252 RBM19Q9Y4C8 960 aaKnown RBP15.02□□□□□ -0.01
MTHFD1-210ENST00000555252 MAGI3Q5TCQ9 1506 aa15.02□□□□□ -0.01
MTHFD1-210ENST00000555252 KIAA0586Q9BVV6 1533 aa15.01□□□□□ -0.01
MTHFD1-210ENST00000555252 TONSLQ96HA7 1378 aa14.98□□□□□ -0.01
MTHFD1-210ENST00000555252 GCC2Q8IWJ2 1684 aa14.97□□□□□ -0.01
MTHFD1-210ENST00000555252 KCNH8Q96L42 1107 aa14.97□□□□□ -0.01
MTHFD1-210ENST00000555252 ZNF608Q9ULD9 1512 aaPredicted RBP14.96□□□□□ -0.01
MTHFD1-210ENST00000555252 KIAA0556O60303 1618 aa14.96□□□□□ -0.01
MTHFD1-210ENST00000555252 FANCIQ9NVI1 1328 aa14.95□□□□□ -0.02
MTHFD1-210ENST00000555252 MYT1LQ9UL68 1186 aa14.94□□□□□ -0.02
MTHFD1-210ENST00000555252 GRIN2AQ12879 1464 aa14.94□□□□□ -0.02
MTHFD1-210ENST00000555252 CDK13Q14004 1512 aaKnown RBP14.93□□□□□ -0.02
MTHFD1-210ENST00000555252 DISP1Q96F81 1524 aa14.93□□□□□ -0.02
MTHFD1-210ENST00000555252 ANP32CO43423 234 aa14.93□□□□□ -0.02
MTHFD1-210ENST00000555252 DDX10Q13206 875 aaKnown RBP14.93□□□□□ -0.02
MTHFD1-210ENST00000555252 BCANQ96GW7 911 aa14.93□□□□□ -0.02
MTHFD1-210ENST00000555252 EIF4G3O43432 1585 aaKnown RBP14.93□□□□□ -0.02
MTHFD1-210ENST00000555252 MAGI1Q96QZ7 1491 aaPredicted RBP14.93□□□□□ -0.02
MTHFD1-210ENST00000555252 ERICH6BQ5W0A0 696 aa14.92□□□□□ -0.02
MTHFD1-210ENST00000555252 CDK11AQ9UQ88 783 aaPredicted RBP14.91□□□□□ -0.02
MTHFD1-210ENST00000555252 RAPGEF6Q8TEU7 1601 aa14.9□□□□□ -0.02
MTHFD1-210ENST00000555252 ROCK1Q13464 1354 aa14.89□□□□□ -0.03
MTHFD1-210ENST00000555252 NUP153P49790 1475 aaKnown RBP14.87□□□□□ -0.03
MTHFD1-210ENST00000555252 SYNJ2O15056 1496 aa14.87□□□□□ -0.03
MTHFD1-210ENST00000555252 RRP7BPQ9NSQ0 103 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms