RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 SOGA1O94964 1423 aa4.04□□□□□ -1.76
PRPF39-205ENST00000554081 CCDC88BA6NC98 1476 aa4.04□□□□□ -1.76
PRPF39-205ENST00000554081 FAM69CQ0P6D2 419 aa4.03□□□□□ -1.76
PRPF39-205ENST00000554081 RAD54L2Q9Y4B4 1467 aa4.03□□□□□ -1.76
PRPF39-205ENST00000554081 ZNF777Q9ULD5 760 aaPredicted RBP4.02□□□□□ -1.77
PRPF39-205ENST00000554081 JPH4Q96JJ6 628 aa4.01□□□□□ -1.77
PRPF39-205ENST00000554081 ZNF608Q9ULD9 1512 aaPredicted RBP4□□□□□ -1.77
PRPF39-205ENST00000554081 LOC105371045A0A1W2PR82 267 aa4□□□□□ -1.77
PRPF39-205ENST00000554081 ITGAEP38570 1179 aa4□□□□□ -1.77
PRPF39-205ENST00000554081 MRC2Q9UBG0 1479 aa3.99□□□□□ -1.77
PRPF39-205ENST00000554081 CUX2O14529 1486 aa3.98□□□□□ -1.77
PRPF39-205ENST00000554081 ESF1Q9H501 851 aaKnown RBP3.97□□□□□ -1.77
PRPF39-205ENST00000554081 ABCB7O75027 752 aa3.96□□□□□ -1.78
PRPF39-205ENST00000554081 ABCC8Q09428 1581 aa3.96□□□□□ -1.78
PRPF39-205ENST00000554081 WRNQ14191 1432 aaPredicted RBP eCLIP3.96□□□□□ -1.78
PRPF39-205ENST00000554081 EVX2Q03828 476 aa3.96□□□□□ -1.78
PRPF39-205ENST00000554081 CSRNP3Q8WYN3 585 aa3.95□□□□□ -1.78
PRPF39-205ENST00000554081 CLCN6P51797 869 aa3.95□□□□□ -1.78
PRPF39-205ENST00000554081 BCANQ96GW7 911 aa3.95□□□□□ -1.78
PRPF39-205ENST00000554081 CFTRP13569 1480 aa3.94□□□□□ -1.78
PRPF39-205ENST00000554081 FGD5Q6ZNL6 1462 aa3.94□□□□□ -1.78
PRPF39-205ENST00000554081 URB2Q14146 1524 aaKnown RBP3.94□□□□□ -1.78
PRPF39-205ENST00000554081 C19orf67A6NJJ6 358 aa3.94□□□□□ -1.78
PRPF39-205ENST00000554081 GABBR2O75899 941 aa3.93□□□□□ -1.78
PRPF39-205ENST00000554081 PLEKHG5O94827 1062 aa3.93□□□□□ -1.78
PRPF39-205ENST00000554081 HMGXB3Q12766 1538 aa3.93□□□□□ -1.78
PRPF39-205ENST00000554081 REM2Q8IYK8 340 aaPredicted RBP3.93□□□□□ -1.78
PRPF39-205ENST00000554081 TOPBP1Q92547 1522 aa3.93□□□□□ -1.78
PRPF39-205ENST00000554081 NCBP3Q53F19 620 aaKnown RBP3.93□□□□□ -1.78
PRPF39-205ENST00000554081 LAMC3Q9Y6N6 1575 aa3.92□□□□□ -1.78
PRPF39-205ENST00000554081 TOP2AP11388 1531 aaKnown RBP3.92□□□□□ -1.78
PRPF39-205ENST00000554081 SNAPC4Q5SXM2 1469 aa3.92□□□□□ -1.78
PRPF39-205ENST00000554081 KIF21AQ7Z4S6 1674 aa3.92□□□□□ -1.78
PRPF39-205ENST00000554081 GAPVD1Q14C86 1478 aa3.92□□□□□ -1.78
PRPF39-205ENST00000554081 CARMIL1Q5VZK9 1371 aa3.92□□□□□ -1.78
PRPF39-205ENST00000554081 DAXXQ9UER7 740 aaPredicted RBP3.92□□□□□ -1.78
PRPF39-205ENST00000554081 PLEKHD1A6NEE1 506 aa3.91□□□□□ -1.78
PRPF39-205ENST00000554081 POTEMA6NI47 508 aa3.91□□□□□ -1.78
PRPF39-205ENST00000554081 POLA1P09884 1462 aaPredicted RBP3.91□□□□□ -1.78
PRPF39-205ENST00000554081 RAPGEF3O95398 923 aa3.9□□□□□ -1.78
PRPF39-205ENST00000554081 PRG4Q92954 1404 aaPredicted RBP3.9□□□□□ -1.78
PRPF39-205ENST00000554081 IFT140Q96RY7 1462 aa3.9□□□□□ -1.79
PRPF39-205ENST00000554081 PTPRGP23470 1445 aa3.9□□□□□ -1.79
PRPF39-205ENST00000554081 KIF27Q86VH2 1401 aa3.89□□□□□ -1.79
PRPF39-205ENST00000554081 CHGAP10645 457 aaKnown RBP3.89□□□□□ -1.79
PRPF39-205ENST00000554081 FAM50AQ14320 339 aaKnown RBP3.89□□□□□ -1.79
PRPF39-205ENST00000554081 GGT6Q6P531 493 aa3.89□□□□□ -1.79
PRPF39-205ENST00000554081 POTEGQ6S5H5 508 aa3.88□□□□□ -1.79
PRPF39-205ENST00000554081 CHIC2Q9UKJ5 165 aa3.88□□□□□ -1.79
PRPF39-205ENST00000554081 HSPA2P54652 639 aa3.88□□□□□ -1.79
PRPF39-205ENST00000554081 STAG3Q9UJ98 1225 aa3.88□□□□□ -1.79
PRPF39-205ENST00000554081 GRIN2BQ13224 1484 aa3.88□□□□□ -1.79
PRPF39-205ENST00000554081 CDK11AQ9UQ88 783 aaPredicted RBP3.87□□□□□ -1.79
PRPF39-205ENST00000554081 RUSC2Q8N2Y8 1516 aa3.87□□□□□ -1.79
PRPF39-205ENST00000554081 PITPNM1O00562 1244 aa3.87□□□□□ -1.79
PRPF39-205ENST00000554081 CEBPAP49715 358 aaPredicted RBP3.86□□□□□ -1.79
PRPF39-205ENST00000554081 CARMIL2Q6F5E8 1435 aa3.86□□□□□ -1.79
PRPF39-205ENST00000554081 SAMD1Q6SPF0 538 aaPredicted RBP3.86□□□□□ -1.79
PRPF39-205ENST00000554081 ARHGEF11O15085 1522 aa3.85□□□□□ -1.79
PRPF39-205ENST00000554081 IGF1RP08069 1367 aa3.85□□□□□ -1.79
PRPF39-205ENST00000554081 CUX1P39880 1505 aa3.85□□□□□ -1.79
PRPF39-205ENST00000554081 C14orf37Q86TY3 774 aa3.84□□□□□ -1.79
PRPF39-205ENST00000554081 ZBTB12Q9Y330 459 aaPredicted RBP3.84□□□□□ -1.79
PRPF39-205ENST00000554081 AFAP1Q8N556 730 aa3.83□□□□□ -1.8
PRPF39-205ENST00000554081 PIP4K2BP78356 416 aa3.83□□□□□ -1.8
PRPF39-205ENST00000554081 HNRNPMP52272 730 aaKnown RBP eCLIP3.83□□□□□ -1.8
PRPF39-205ENST00000554081 CFDP1Q9UEE9 299 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-205ENST00000554081 DNMBPQ6XZF7 1577 aa3.82□□□□□ -1.8
PRPF39-205ENST00000554081 THOC2Q8NI27 1593 aaKnown RBP3.82□□□□□ -1.8
PRPF39-205ENST00000554081 WDR62O43379 1518 aa3.82□□□□□ -1.8
PRPF39-205ENST00000554081 FHAD1B1AJZ9 1412 aa3.82□□□□□ -1.8
PRPF39-205ENST00000554081 POTEIP0CG38 1075 aa3.82□□□□□ -1.8
PRPF39-205ENST00000554081 MYT1Q01538 1121 aa3.82□□□□□ -1.8
PRPF39-205ENST00000554081 SYNJ2O15056 1496 aa3.82□□□□□ -1.8
PRPF39-205ENST00000554081 TRIM52Q96A61 297 aa3.82□□□□□ -1.8
PRPF39-205ENST00000554081 FHOD3Q2V2M9 1422 aa3.82□□□□□ -1.8
PRPF39-205ENST00000554081 NUTM2DQ5VT03 806 aaPredicted RBP3.82□□□□□ -1.8
PRPF39-205ENST00000554081 TSPY4P0CV99 314 aa3.81□□□□□ -1.8
PRPF39-205ENST00000554081 TSPY10P0CW01 314 aa3.81□□□□□ -1.8
PRPF39-205ENST00000554081 ARAP1Q96P48 1450 aa3.81□□□□□ -1.8
PRPF39-205ENST00000554081 EIF4G3O43432 1585 aaKnown RBP3.81□□□□□ -1.8
PRPF39-205ENST00000554081 RBM33Q96EV2 1170 aaKnown RBP3.81□□□□□ -1.8
PRPF39-205ENST00000554081 PEG3Q9GZU2 1588 aa3.81□□□□□ -1.8
PRPF39-205ENST00000554081 GRIN2AQ12879 1464 aa3.8□□□□□ -1.8
PRPF39-205ENST00000554081 CNGB1Q14028 1251 aaPredicted RBP3.8□□□□□ -1.8
PRPF39-205ENST00000554081 MTUS2Q5JR59 1369 aa3.8□□□□□ -1.8
PRPF39-205ENST00000554081 EFCAB2Q5VUJ9 269 aa3.8□□□□□ -1.8
PRPF39-205ENST00000554081 KIF3BO15066 747 aa3.8□□□□□ -1.8
PRPF39-205ENST00000554081 TNIKQ9UKE5 1360 aa3.79□□□□□ -1.8
PRPF39-205ENST00000554081 SYNJ1O43426 1573 aa3.79□□□□□ -1.8
PRPF39-205ENST00000554081 ZNF326Q5BKZ1 582 aaKnown RBP3.79□□□□□ -1.8
PRPF39-205ENST00000554081 OTUD5Q96G74 571 aa3.79□□□□□ -1.8
PRPF39-205ENST00000554081 RRP7BPQ9NSQ0 103 aa3.79□□□□□ -1.8
PRPF39-205ENST00000554081 PPP1R15AO75807 674 aaPredicted RBP3.79□□□□□ -1.8
PRPF39-205ENST00000554081 SLC4A1APQ9BWU0 796 aaKnown RBP3.78□□□□□ -1.8
PRPF39-205ENST00000554081 MAGI1Q96QZ7 1491 aaPredicted RBP3.78□□□□□ -1.8
PRPF39-205ENST00000554081 ERCC6L2Q5T890 1561 aa3.78□□□□□ -1.8
PRPF39-205ENST00000554081 RIMBP3CA6NJZ7 1639 aa3.78□□□□□ -1.8
PRPF39-205ENST00000554081 RIMBP3BA6NNM3 1639 aa3.78□□□□□ -1.8
PRPF39-205ENST00000554081 RIMBP3Q9UFD9 1639 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms