RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 POTEHQ6S545 545 aa10.03□□□□□ -0.8
PABPN1-204ENST00000554062 RIOK3O14730 519 aaKnown RBP10.02□□□□□ -0.81
PABPN1-204ENST00000554062 RYDENQ9NUL5 291 aaKnown RBP10.02□□□□□ -0.81
PABPN1-204ENST00000554062 TSHZ2Q9NRE2 1034 aa10.01□□□□□ -0.81
PABPN1-204ENST00000554062 NUBP1P53384 320 aa10□□□□□ -0.81
PABPN1-204ENST00000554062 DCAF8Q5TAQ9 597 aa10□□□□□ -0.81
PABPN1-204ENST00000554062 NBR1Q14596 966 aa9.99□□□□□ -0.81
PABPN1-204ENST00000554062 VGFO15240 615 aaPredicted RBP9.98□□□□□ -0.81
PABPN1-204ENST00000554062 PRR29P0C7W0 189 aa9.98□□□□□ -0.81
PABPN1-204ENST00000554062 CHRM1P11229 460 aaPredicted RBP9.96□□□□□ -0.82
PABPN1-204ENST00000554062 RNF25Q96BH1 459 aaPredicted RBP9.94□□□□□ -0.82
PABPN1-204ENST00000554062 TPRNQ4KMQ1 711 aa9.93□□□□□ -0.82
PABPN1-204ENST00000554062 SGIP1Q9BQI5 828 aa9.92□□□□□ -0.82
PABPN1-204ENST00000554062 CLEC11AQ9Y240 323 aa9.92□□□□□ -0.82
PABPN1-204ENST00000554062 STK25O00506 426 aa9.91□□□□□ -0.82
PABPN1-204ENST00000554062 PRKCSHP14314 528 aaPredicted RBP9.89□□□□□ -0.83
PABPN1-204ENST00000554062 CREBZFQ9NS37 354 aa9.89□□□□□ -0.83
PABPN1-204ENST00000554062 REM2Q8IYK8 340 aaPredicted RBP9.86□□□□□ -0.83
PABPN1-204ENST00000554062 GTPBP6O43824 516 aaPredicted RBP9.84□□□□□ -0.83
PABPN1-204ENST00000554062 MNX1P50219 401 aaPredicted RBP9.84□□□□□ -0.83
PABPN1-204ENST00000554062 NKX1-1Q15270 411 aaPredicted RBP9.82□□□□□ -0.84
PABPN1-204ENST00000554062 BCL11BQ9C0K0 894 aaPredicted RBP9.8□□□□□ -0.84
PABPN1-204ENST00000554062 STK24Q9Y6E0 443 aa9.8□□□□□ -0.84
PABPN1-204ENST00000554062 ZNF467Q7Z7K2 595 aaPredicted RBP9.79□□□□□ -0.84
PABPN1-204ENST00000554062 P3H3Q8IVL6 736 aa9.79□□□□□ -0.84
PABPN1-204ENST00000554062 RASEFQ8IZ41 740 aa9.79□□□□□ -0.84
PABPN1-204ENST00000554062 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.77□□□□□ -0.85
PABPN1-204ENST00000554062 ZFP91Q96JP5 570 aaPredicted RBP9.77□□□□□ -0.85
PABPN1-204ENST00000554062 PYGBP11216 843 aa9.73□□□□□ -0.85
PABPN1-204ENST00000554062 PITPNM1O00562 1244 aa9.72□□□□□ -0.85
PABPN1-204ENST00000554062 PDAP1Q13442 181 aaKnown RBP9.7□□□□□ -0.86
PABPN1-204ENST00000554062 CHRDL2Q6WN34 429 aa9.69□□□□□ -0.86
PABPN1-204ENST00000554062 WDR70Q9NW82 654 aa9.67□□□□□ -0.86
PABPN1-204ENST00000554062 TULP1O00294 542 aaPredicted RBP9.63□□□□□ -0.87
PABPN1-204ENST00000554062 PAK3O75914 559 aaPredicted RBP9.63□□□□□ -0.87
PABPN1-204ENST00000554062 FARP1Q9Y4F1 1045 aaPredicted RBP9.62□□□□□ -0.87
PABPN1-204ENST00000554062 ZNF579Q8NAF0 562 aaKnown RBP9.61□□□□□ -0.87
PABPN1-204ENST00000554062 TSPYL2Q9H2G4 693 aaPredicted RBP9.61□□□□□ -0.87
PABPN1-204ENST00000554062 ERICH6Q7L0X2 663 aa9.6□□□□□ -0.87
PABPN1-204ENST00000554062 PSEN1P49768 467 aa9.56□□□□□ -0.88
PABPN1-204ENST00000554062 CCDC61Q9Y6R9 512 aa9.54□□□□□ -0.88
PABPN1-204ENST00000554062 SOX12O15370 315 aa9.52□□□□□ -0.89
PABPN1-204ENST00000554062 NLRP6P59044 892 aa9.52□□□□□ -0.89
PABPN1-204ENST00000554062 CHADLQ6NUI6 762 aa9.52□□□□□ -0.89
PABPN1-204ENST00000554062 PRKAR2AP13861 404 aaKnown RBP9.51□□□□□ -0.89
PABPN1-204ENST00000554062 PCDHB8Q9UN66 801 aa9.5□□□□□ -0.89
PABPN1-204ENST00000554062 PCDHB13Q9Y5F0 798 aa9.5□□□□□ -0.89
PABPN1-204ENST00000554062 KCNV2Q8TDN2 545 aa9.49□□□□□ -0.89
PABPN1-204ENST00000554062 MFRPQ9BY79 579 aa9.49□□□□□ -0.89
PABPN1-204ENST00000554062 ARHGEF1Q92888 912 aaKnown RBP9.48□□□□□ -0.89
PABPN1-204ENST00000554062 FXR2P51116 673 aaKnown RBP eCLIP9.46□□□□□ -0.9
PABPN1-204ENST00000554062 TMEM132AQ24JP5 1023 aa9.46□□□□□ -0.9
PABPN1-204ENST00000554062 LMOD2Q6P5Q4 547 aa9.46□□□□□ -0.9
PABPN1-204ENST00000554062 PIP4P2Q8N4L2 257 aa9.46□□□□□ -0.9
PABPN1-204ENST00000554062 CADPS2Q86UW7 1296 aa9.44□□□□□ -0.9
PABPN1-204ENST00000554062 E2F4Q16254 413 aa9.43□□□□□ -0.9
PABPN1-204ENST00000554062 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.43□□□□□ -0.9
PABPN1-204ENST00000554062 IFNL1Q8IU54 200 aa9.42□□□□□ -0.9
PABPN1-204ENST00000554062 CABP2Q9NPB3 220 aa9.42□□□□□ -0.9
PABPN1-204ENST00000554062 FBXO22Q8NEZ5 403 aa9.41□□□□□ -0.9
PABPN1-204ENST00000554062 KIF12Q96FN5 646 aa9.41□□□□□ -0.9
PABPN1-204ENST00000554062 SMYD5Q6GMV2 418 aa9.4□□□□□ -0.9
PABPN1-204ENST00000554062 EFCAB3Q8N7B9 438 aa9.4□□□□□ -0.9
PABPN1-204ENST00000554062 MAP3K13O43283 966 aa9.39□□□□□ -0.91
PABPN1-204ENST00000554062 GOLGA2Q08379 1002 aa9.39□□□□□ -0.91
PABPN1-204ENST00000554062 GTF3C3Q9Y5Q9 886 aa9.38□□□□□ -0.91
PABPN1-204ENST00000554062 PDE4AP27815 886 aa9.37□□□□□ -0.91
PABPN1-204ENST00000554062 SP7Q8TDD2 431 aaPredicted RBP9.36□□□□□ -0.91
PABPN1-204ENST00000554062 PHF8Q9UPP1 1060 aa9.36□□□□□ -0.91
PABPN1-204ENST00000554062 TESPA1A2RU30 521 aaPredicted RBP9.33□□□□□ -0.92
PABPN1-204ENST00000554062 ARIH1Q9Y4X5 557 aaPredicted RBP9.33□□□□□ -0.92
PABPN1-204ENST00000554062 PPP1R37O75864 691 aa9.32□□□□□ -0.92
PABPN1-204ENST00000554062 MFSD10Q14728 455 aa9.31□□□□□ -0.92
PABPN1-204ENST00000554062 DAXXQ9UER7 740 aaPredicted RBP9.31□□□□□ -0.92
PABPN1-204ENST00000554062 ZRANB1Q9UGI0 708 aa9.31□□□□□ -0.92
PABPN1-204ENST00000554062 DDX27Q96GQ7 796 aaKnown RBP9.3□□□□□ -0.92
PABPN1-204ENST00000554062 CD44P16070 742 aaKnown RBP9.29□□□□□ -0.92
PABPN1-204ENST00000554062 MKRN3Q13064 507 aaKnown RBP9.29□□□□□ -0.92
PABPN1-204ENST00000554062 HAX1O00165 279 aa9.28□□□□□ -0.92
PABPN1-204ENST00000554062 LARP6Q9BRS8 491 aaKnown RBP9.28□□□□□ -0.92
PABPN1-204ENST00000554062 CRISPLD2Q9H0B8 497 aa9.28□□□□□ -0.92
PABPN1-204ENST00000554062 ZC3H15Q8WU90 426 aaKnown RBP9.27□□□□□ -0.93
PABPN1-204ENST00000554062 TMEM106CQ9BVX2 250 aa9.26□□□□□ -0.93
PABPN1-204ENST00000554062 NCKAP5LQ9HCH0 1330 aa9.26□□□□□ -0.93
PABPN1-204ENST00000554062 SEMA3EO15041 775 aa9.25□□□□□ -0.93
PABPN1-204ENST00000554062 TIMELESSQ9UNS1 1208 aa9.25□□□□□ -0.93
PABPN1-204ENST00000554062 CAMK2BQ13554 666 aa9.23□□□□□ -0.93
PABPN1-204ENST00000554062 BRPF1P55201 1214 aaPredicted RBP9.22□□□□□ -0.93
PABPN1-204ENST00000554062 MS4A4AQ96JQ5 239 aa9.22□□□□□ -0.93
PABPN1-204ENST00000554062 TIE1P35590 1138 aa9.21□□□□□ -0.94
PABPN1-204ENST00000554062 EVX2Q03828 476 aa9.21□□□□□ -0.94
PABPN1-204ENST00000554062 PHF12Q96QT6 1004 aa9.21□□□□□ -0.94
PABPN1-204ENST00000554062 NEUROD2Q15784 382 aa9.2□□□□□ -0.94
PABPN1-204ENST00000554062 CLCN6P51797 869 aa9.19□□□□□ -0.94
PABPN1-204ENST00000554062 ZMYND10O75800 440 aa9.18□□□□□ -0.94
PABPN1-204ENST00000554062 C14orf37Q86TY3 774 aa9.18□□□□□ -0.94
PABPN1-204ENST00000554062 SPDYE16A6NNV3 312 aaPredicted RBP9.17□□□□□ -0.94
PABPN1-204ENST00000554062 PPP1R15BQ5SWA1 713 aa9.16□□□□□ -0.94
PABPN1-204ENST00000554062 MS4A3Q96HJ5 214 aa9.15□□□□□ -0.94
PABPN1-204ENST00000554062 SLC24A3Q9HC58 644 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms