RNA–Protein interactions for RNA: ENST00000553835.5

PSMC1-203, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 3

Gene PSMC1, Length 390 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-203ENST00000553835 FGD5Q6ZNL6 1462 aa17.58■□□□□ 0.41
PSMC1-203ENST00000553835 TSPOAP1O95153 1857 aa17.56■□□□□ 0.4
PSMC1-203ENST00000553835 NPM1P06748 294 aaKnown RBP eCLIP17.56■□□□□ 0.4
PSMC1-203ENST00000553835 PBRM1Q86U86 1689 aa17.55■□□□□ 0.4
PSMC1-203ENST00000553835 COL17A1Q9UMD9 1497 aaPredicted RBP17.54■□□□□ 0.4
PSMC1-203ENST00000553835 TOP2BQ02880 1626 aa17.5■□□□□ 0.39
PSMC1-203ENST00000553835 PRG4Q92954 1404 aaPredicted RBP17.49■□□□□ 0.39
PSMC1-203ENST00000553835 ADCY10Q96PN6 1610 aa17.49■□□□□ 0.39
PSMC1-203ENST00000553835 PPRC1Q5VV67 1664 aaKnown RBP17.48■□□□□ 0.39
PSMC1-203ENST00000553835 ABCA5Q8WWZ7 1642 aa17.44■□□□□ 0.38
PSMC1-203ENST00000553835 SPATA31D1Q6ZQQ2 1576 aa17.44■□□□□ 0.38
PSMC1-203ENST00000553835 GLI2P10070 1586 aa17.4■□□□□ 0.38
PSMC1-203ENST00000553835 CERKQ8TCT0 537 aa17.4■□□□□ 0.38
PSMC1-203ENST00000553835 CUX1P39880 1505 aa17.39■□□□□ 0.37
PSMC1-203ENST00000553835 JPH4Q96JJ6 628 aa17.39■□□□□ 0.37
PSMC1-203ENST00000553835 ABCA10Q8WWZ4 1543 aa17.38■□□□□ 0.37
PSMC1-203ENST00000553835 ADAMTS12P58397 1594 aa17.37■□□□□ 0.37
PSMC1-203ENST00000553835 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
PSMC1-203ENST00000553835 PCF11O94913 1555 aaKnown RBP17.29■□□□□ 0.36
PSMC1-203ENST00000553835 PTPRMP28827 1452 aa17.26■□□□□ 0.35
PSMC1-203ENST00000553835 PLB1Q6P1J6 1458 aa17.24■□□□□ 0.35
PSMC1-203ENST00000553835 TEX14Q8IWB6 1497 aa17.22■□□□□ 0.35
PSMC1-203ENST00000553835 ASXL2Q76L83 1435 aa17.21■□□□□ 0.35
PSMC1-203ENST00000553835 MAP3K4Q9Y6R4 1608 aa17.21■□□□□ 0.35
PSMC1-203ENST00000553835 ABCC2Q92887 1545 aa17.17■□□□□ 0.34
PSMC1-203ENST00000553835 ADAMTSL3P82987 1691 aa17.16■□□□□ 0.34
PSMC1-203ENST00000553835 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
PSMC1-203ENST00000553835 EPRSP07814 1512 aaKnown RBP17.14■□□□□ 0.33
PSMC1-203ENST00000553835 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
PSMC1-203ENST00000553835 KIAA0586Q9BVV6 1533 aa17.11■□□□□ 0.33
PSMC1-203ENST00000553835 KIF21BO75037 1637 aa17.1■□□□□ 0.33
PSMC1-203ENST00000553835 HSPA2P54652 639 aa17.04■□□□□ 0.32
PSMC1-203ENST00000553835 UHRF1BP1LA0JNW5 1464 aa17.04■□□□□ 0.32
PSMC1-203ENST00000553835 PTPRGP23470 1445 aa17.04■□□□□ 0.32
PSMC1-203ENST00000553835 MAGI3Q5TCQ9 1506 aa16.99■□□□□ 0.31
PSMC1-203ENST00000553835 WRNQ14191 1432 aaPredicted RBP eCLIP16.98■□□□□ 0.31
PSMC1-203ENST00000553835 KDM5BQ9UGL1 1544 aa16.96■□□□□ 0.31
PSMC1-203ENST00000553835 CUL7Q14999 1698 aa16.96■□□□□ 0.31
PSMC1-203ENST00000553835 BCORL1Q5H9F3 1711 aa16.93■□□□□ 0.3
PSMC1-203ENST00000553835 MADDQ8WXG6 1647 aa16.93■□□□□ 0.3
PSMC1-203ENST00000553835 TNIKQ9UKE5 1360 aa16.91■□□□□ 0.3
PSMC1-203ENST00000553835 ARAP3Q8WWN8 1544 aa16.91■□□□□ 0.3
PSMC1-203ENST00000553835 UACAQ9BZF9 1416 aa16.89■□□□□ 0.29
PSMC1-203ENST00000553835 IQSEC2Q5JU85 1478 aa16.89■□□□□ 0.29
PSMC1-203ENST00000553835 CD109Q6YHK3 1445 aa16.86■□□□□ 0.29
PSMC1-203ENST00000553835 YEATS2Q9ULM3 1422 aa16.84■□□□□ 0.29
PSMC1-203ENST00000553835 WDR7Q9Y4E6 1490 aa16.83■□□□□ 0.28
PSMC1-203ENST00000553835 DMRT2Q9Y5R5 561 aa16.83■□□□□ 0.28
PSMC1-203ENST00000553835 CFAP43Q8NDM7 1665 aa16.81■□□□□ 0.28
PSMC1-203ENST00000553835 ZCCHC11Q5TAX3 1644 aaKnown RBP16.8■□□□□ 0.28
PSMC1-203ENST00000553835 LTBP4Q8N2S1 1624 aa16.8■□□□□ 0.28
PSMC1-203ENST00000553835 RIMS1Q86UR5 1692 aaKnown RBP16.78■□□□□ 0.28
PSMC1-203ENST00000553835 STRCQ7RTU9 1775 aa16.78■□□□□ 0.28
PSMC1-203ENST00000553835 CARMIL2Q6F5E8 1435 aa16.78■□□□□ 0.28
PSMC1-203ENST00000553835 MED1Q15648 1581 aaPredicted RBP16.75■□□□□ 0.27
PSMC1-203ENST00000553835 PTPRTO14522 1441 aa16.73■□□□□ 0.27
PSMC1-203ENST00000553835 PHLDB1Q86UU1 1377 aa16.73■□□□□ 0.27
PSMC1-203ENST00000553835 BIVM-ERCC5R4GMW8 1640 aa16.73■□□□□ 0.27
PSMC1-203ENST00000553835 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
PSMC1-203ENST00000553835 ARID4BQ4LE39 1312 aaPredicted RBP16.68■□□□□ 0.26
PSMC1-203ENST00000553835 DISP1Q96F81 1524 aa16.66■□□□□ 0.26
PSMC1-203ENST00000553835 RAPGEF3O95398 923 aa16.65■□□□□ 0.26
PSMC1-203ENST00000553835 FRMPD1Q5SYB0 1578 aa16.63■□□□□ 0.25
PSMC1-203ENST00000553835 TTC37Q6PGP7 1564 aa16.63■□□□□ 0.25
PSMC1-203ENST00000553835 PREX1Q8TCU6 1659 aa16.62■□□□□ 0.25
PSMC1-203ENST00000553835 IGF1RP08069 1367 aa16.61■□□□□ 0.25
PSMC1-203ENST00000553835 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
PSMC1-203ENST00000553835 KCNH8Q96L42 1107 aa16.59■□□□□ 0.25
PSMC1-203ENST00000553835 POGZQ7Z3K3 1410 aa16.57■□□□□ 0.24
PSMC1-203ENST00000553835 UBAP1LF5GYI3 381 aa16.56■□□□□ 0.24
PSMC1-203ENST00000553835 NEO1Q92859 1461 aa16.55■□□□□ 0.24
PSMC1-203ENST00000553835 PLPPR3Q6T4P5 718 aa16.55■□□□□ 0.24
PSMC1-203ENST00000553835 IQGAP2Q13576 1575 aa16.54■□□□□ 0.24
PSMC1-203ENST00000553835 HSPA1LP34931 641 aa16.53■□□□□ 0.24
PSMC1-203ENST00000553835 FANCAO15360 1455 aa16.52■□□□□ 0.23
PSMC1-203ENST00000553835 SIGLEC1Q9BZZ2 1709 aa16.51■□□□□ 0.23
PSMC1-203ENST00000553835 UHRF1BP1Q6BDS2 1440 aa16.48■□□□□ 0.23
PSMC1-203ENST00000553835 PHF23Q9BUL5 403 aaPredicted RBP16.48■□□□□ 0.23
PSMC1-203ENST00000553835 UGGT2Q9NYU1 1516 aa16.48■□□□□ 0.23
PSMC1-203ENST00000553835 FER1L4A9Z1Z3 1794 aa16.47■□□□□ 0.23
PSMC1-203ENST00000553835 ABCA9Q8IUA7 1624 aa16.47■□□□□ 0.23
PSMC1-203ENST00000553835 ARHGEF12Q9NZN5 1544 aa16.46■□□□□ 0.23
PSMC1-203ENST00000553835 SRCAPQ6ZRS2 3230 aa16.45■□□□□ 0.22
PSMC1-203ENST00000553835 AKNAQ7Z591 1439 aa16.45■□□□□ 0.22
PSMC1-203ENST00000553835 SETD1BQ9UPS6 1966 aaKnown RBP16.45■□□□□ 0.22
PSMC1-203ENST00000553835 FHOD3Q2V2M9 1422 aa16.45■□□□□ 0.22
PSMC1-203ENST00000553835 NCOA1Q15788 1441 aa16.44■□□□□ 0.22
PSMC1-203ENST00000553835 RGS17Q9UGC6 210 aaPredicted RBP16.43■□□□□ 0.22
PSMC1-203ENST00000553835 KIAA0556O60303 1618 aa16.43■□□□□ 0.22
PSMC1-203ENST00000553835 ABCA8O94911 1581 aa16.43■□□□□ 0.22
PSMC1-203ENST00000553835 CEBPAP49715 358 aaPredicted RBP16.42■□□□□ 0.22
PSMC1-203ENST00000553835 RICTORQ6R327 1708 aa16.4■□□□□ 0.22
PSMC1-203ENST00000553835 ZMYM4Q5VZL5 1548 aa16.4■□□□□ 0.22
PSMC1-203ENST00000553835 CARMIL1Q5VZK9 1371 aa16.39■□□□□ 0.21
PSMC1-203ENST00000553835 ZNF335Q9H4Z2 1342 aaPredicted RBP16.38■□□□□ 0.21
PSMC1-203ENST00000553835 DENND4BO75064 1496 aaPredicted RBP16.37■□□□□ 0.21
PSMC1-203ENST00000553835 MAGI2Q86UL8 1455 aa16.36■□□□□ 0.21
PSMC1-203ENST00000553835 MLECQ14165 292 aa16.35■□□□□ 0.21
PSMC1-203ENST00000553835 KIF27Q86VH2 1401 aa16.34■□□□□ 0.21
PSMC1-203ENST00000553835 ZFYVE16Q7Z3T8 1539 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms