RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 LRRC9Q6ZRR7 1453 aa10.17□□□□□ -0.78
LINC-ROR-201ENST00000553704 FANCD2Q9BXW9 1451 aa10.17□□□□□ -0.78
LINC-ROR-201ENST00000553704 PHLDB1Q86UU1 1377 aa10.17□□□□□ -0.78
LINC-ROR-201ENST00000553704 RAB3GAP2Q9H2M9 1393 aa10.17□□□□□ -0.78
LINC-ROR-201ENST00000553704 RAD54L2Q9Y4B4 1467 aa10.16□□□□□ -0.78
LINC-ROR-201ENST00000553704 DNMBPQ6XZF7 1577 aa10.15□□□□□ -0.78
LINC-ROR-201ENST00000553704 NESP48681 1621 aa10.14□□□□□ -0.79
LINC-ROR-201ENST00000553704 FHOD3Q2V2M9 1422 aa10.13□□□□□ -0.79
LINC-ROR-201ENST00000553704 POLA1P09884 1462 aaPredicted RBP10.13□□□□□ -0.79
LINC-ROR-201ENST00000553704 CTTNBP2Q8WZ74 1663 aa10.13□□□□□ -0.79
LINC-ROR-201ENST00000553704 TOPBP1Q92547 1522 aa10.12□□□□□ -0.79
LINC-ROR-201ENST00000553704 P3H3Q8IVL6 736 aa10.12□□□□□ -0.79
LINC-ROR-201ENST00000553704 ABCA10Q8WWZ4 1543 aa10.12□□□□□ -0.79
LINC-ROR-201ENST00000553704 WDR97A6NE52 1622 aa10.11□□□□□ -0.79
LINC-ROR-201ENST00000553704 FHAD1B1AJZ9 1412 aa10.1□□□□□ -0.79
LINC-ROR-201ENST00000553704 CUL7Q14999 1698 aa10.1□□□□□ -0.79
LINC-ROR-201ENST00000553704 SETD5Q9C0A6 1442 aa10.1□□□□□ -0.79
LINC-ROR-201ENST00000553704 EFCAB5A4FU69 1503 aa10.09□□□□□ -0.79
LINC-ROR-201ENST00000553704 FYCO1Q9BQS8 1478 aa10.08□□□□□ -0.8
LINC-ROR-201ENST00000553704 LRRIQ1Q96JM4 1722 aa10.08□□□□□ -0.8
LINC-ROR-201ENST00000553704 FAM50AQ14320 339 aaKnown RBP10.07□□□□□ -0.8
LINC-ROR-201ENST00000553704 URB2Q14146 1524 aaKnown RBP10.06□□□□□ -0.8
LINC-ROR-201ENST00000553704 CASKIN1Q8WXD9 1431 aa10.06□□□□□ -0.8
LINC-ROR-201ENST00000553704 SNAPC4Q5SXM2 1469 aa10.06□□□□□ -0.8
LINC-ROR-201ENST00000553704 ATP1B4Q9UN42 357 aaPredicted RBP10.05□□□□□ -0.8
LINC-ROR-201ENST00000553704 ABCA5Q8WWZ7 1642 aa10.05□□□□□ -0.8
LINC-ROR-201ENST00000553704 SIN3AQ96ST3 1273 aa10.04□□□□□ -0.8
LINC-ROR-201ENST00000553704 AQRO60306 1485 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINC-ROR-201ENST00000553704 SAMD9Q5K651 1589 aa10.03□□□□□ -0.8
LINC-ROR-201ENST00000553704 KCNH8Q96L42 1107 aa10.03□□□□□ -0.8
LINC-ROR-201ENST00000553704 FGD6Q6ZV73 1430 aa10□□□□□ -0.81
LINC-ROR-201ENST00000553704 LAMC3Q9Y6N6 1575 aa10□□□□□ -0.81
LINC-ROR-201ENST00000553704 KIF21AQ7Z4S6 1674 aa9.99□□□□□ -0.81
LINC-ROR-201ENST00000553704 PTPRKQ15262 1439 aa9.99□□□□□ -0.81
LINC-ROR-201ENST00000553704 TDRD9Q8NDG6 1382 aaKnown RBP9.99□□□□□ -0.81
LINC-ROR-201ENST00000553704 FMN1Q68DA7 1419 aa9.99□□□□□ -0.81
LINC-ROR-201ENST00000553704 SUPT16HQ9Y5B9 1047 aaKnown RBP9.98□□□□□ -0.81
LINC-ROR-201ENST00000553704 PTPN23Q9H3S7 1636 aa9.98□□□□□ -0.81
LINC-ROR-201ENST00000553704 GRIN2BQ13224 1484 aa9.98□□□□□ -0.81
LINC-ROR-201ENST00000553704 CCDC18Q5T9S5 1454 aa9.98□□□□□ -0.81
LINC-ROR-201ENST00000553704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.97□□□□□ -0.81
LINC-ROR-201ENST00000553704 GAPVD1Q14C86 1478 aa9.96□□□□□ -0.81
LINC-ROR-201ENST00000553704 MAGI3Q5TCQ9 1506 aa9.96□□□□□ -0.81
LINC-ROR-201ENST00000553704 NCOA2Q15596 1464 aa9.95□□□□□ -0.82
LINC-ROR-201ENST00000553704 MTUS2Q5JR59 1369 aa9.95□□□□□ -0.82
LINC-ROR-201ENST00000553704 HIRIP3Q9BW71 556 aaPredicted RBP9.95□□□□□ -0.82
LINC-ROR-201ENST00000553704 DNAJC5BQ9UF47 199 aa9.95□□□□□ -0.82
LINC-ROR-201ENST00000553704 SUPT6HQ7KZ85 1726 aaKnown RBP9.95□□□□□ -0.82
LINC-ROR-201ENST00000553704 DDX10Q13206 875 aaKnown RBP9.95□□□□□ -0.82
LINC-ROR-201ENST00000553704 THOC2Q8NI27 1593 aaKnown RBP9.94□□□□□ -0.82
LINC-ROR-201ENST00000553704 TARBP1Q13395 1621 aaKnown RBP9.94□□□□□ -0.82
LINC-ROR-201ENST00000553704 HFM1A2PYH4 1435 aa9.94□□□□□ -0.82
LINC-ROR-201ENST00000553704 EHBP1L1Q8N3D4 1523 aa9.94□□□□□ -0.82
LINC-ROR-201ENST00000553704 PBRM1Q86U86 1689 aa9.93□□□□□ -0.82
LINC-ROR-201ENST00000553704 MYOM3Q5VTT5 1437 aa9.93□□□□□ -0.82
LINC-ROR-201ENST00000553704 NAIPQ13075 1403 aa9.92□□□□□ -0.82
LINC-ROR-201ENST00000553704 UGGT2Q9NYU1 1516 aa9.92□□□□□ -0.82
LINC-ROR-201ENST00000553704 PPP1R15AO75807 674 aaPredicted RBP9.92□□□□□ -0.82
LINC-ROR-201ENST00000553704 KDM5BQ9UGL1 1544 aa9.92□□□□□ -0.82
LINC-ROR-201ENST00000553704 ARHGEF11O15085 1522 aa9.91□□□□□ -0.82
LINC-ROR-201ENST00000553704 UACAQ9BZF9 1416 aa9.91□□□□□ -0.82
LINC-ROR-201ENST00000553704 GCC2Q8IWJ2 1684 aa9.9□□□□□ -0.83
LINC-ROR-201ENST00000553704 KDM6BO15054 1643 aa9.9□□□□□ -0.83
LINC-ROR-201ENST00000553704 PDS5BQ9NTI5 1447 aa9.89□□□□□ -0.83
LINC-ROR-201ENST00000553704 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
LINC-ROR-201ENST00000553704 HECW1Q76N89 1606 aa9.88□□□□□ -0.83
LINC-ROR-201ENST00000553704 TONSLQ96HA7 1378 aa9.88□□□□□ -0.83
LINC-ROR-201ENST00000553704 ADAMTS12P58397 1594 aa9.88□□□□□ -0.83
LINC-ROR-201ENST00000553704 DENND4BO75064 1496 aaPredicted RBP9.88□□□□□ -0.83
LINC-ROR-201ENST00000553704 CDK13Q14004 1512 aaKnown RBP9.88□□□□□ -0.83
LINC-ROR-201ENST00000553704 IQGAP2Q13576 1575 aa9.87□□□□□ -0.83
LINC-ROR-201ENST00000553704 TCOF1Q13428 1488 aaKnown RBP9.86□□□□□ -0.83
LINC-ROR-201ENST00000553704 WDR62O43379 1518 aa9.85□□□□□ -0.83
LINC-ROR-201ENST00000553704 EPRSP07814 1512 aaKnown RBP9.85□□□□□ -0.83
LINC-ROR-201ENST00000553704 BCANQ96GW7 911 aa9.83□□□□□ -0.84
LINC-ROR-201ENST00000553704 RRP7BPQ9NSQ0 103 aa9.83□□□□□ -0.84
LINC-ROR-201ENST00000553704 CHIC2Q9UKJ5 165 aa9.83□□□□□ -0.84
LINC-ROR-201ENST00000553704 TSHZ2Q9NRE2 1034 aa9.82□□□□□ -0.84
LINC-ROR-201ENST00000553704 ARID3CA6NKF2 412 aa9.82□□□□□ -0.84
LINC-ROR-201ENST00000553704 TRIM52Q96A61 297 aa9.81□□□□□ -0.84
LINC-ROR-201ENST00000553704 CCER2I3L3R5 266 aa9.8□□□□□ -0.84
LINC-ROR-201ENST00000553704 ANP32CO43423 234 aa9.8□□□□□ -0.84
LINC-ROR-201ENST00000553704 FKBP8Q14318 412 aa9.79□□□□□ -0.84
LINC-ROR-201ENST00000553704 AKNAQ7Z591 1439 aa9.79□□□□□ -0.84
LINC-ROR-201ENST00000553704 ZNF608Q9ULD9 1512 aaPredicted RBP9.79□□□□□ -0.84
LINC-ROR-201ENST00000553704 MRC2Q9UBG0 1479 aa9.79□□□□□ -0.84
LINC-ROR-201ENST00000553704 KIAA0556O60303 1618 aa9.78□□□□□ -0.84
LINC-ROR-201ENST00000553704 DISP1Q96F81 1524 aa9.77□□□□□ -0.85
LINC-ROR-201ENST00000553704 MIA2Q96PC5 1412 aa9.77□□□□□ -0.85
LINC-ROR-201ENST00000553704 FOXD1Q16676 465 aa9.76□□□□□ -0.85
LINC-ROR-201ENST00000553704 DNMT1P26358 1616 aaKnown RBP9.76□□□□□ -0.85
LINC-ROR-201ENST00000553704 WASHC2AQ641Q2 1341 aa9.76□□□□□ -0.85
LINC-ROR-201ENST00000553704 NUP153P49790 1475 aaKnown RBP9.75□□□□□ -0.85
LINC-ROR-201ENST00000553704 HSPA5P11021 654 aaKnown RBP9.75□□□□□ -0.85
LINC-ROR-201ENST00000553704 DAPK1P53355 1430 aa9.75□□□□□ -0.85
LINC-ROR-201ENST00000553704 RAPGEF6Q8TEU7 1601 aa9.74□□□□□ -0.85
LINC-ROR-201ENST00000553704 EIF4G3O43432 1585 aaKnown RBP9.74□□□□□ -0.85
LINC-ROR-201ENST00000553704 MPHOSPH9Q99550 1183 aa9.73□□□□□ -0.85
LINC-ROR-201ENST00000553704 TEX14Q8IWB6 1497 aa9.73□□□□□ -0.85
LINC-ROR-201ENST00000553704 ZNF644Q9H582 1327 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms