RNA–Protein interactions for RNA: ENST00000553029.1

LINC02406-201, Transcript of long intergenic non-protein coding RNA 2406, humanhuman

TSL 3 BASIC

Gene LINC02406, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02406-201ENST00000553029 FAM69CQ0P6D2 419 aa12.1□□□□□ -0.47
LINC02406-201ENST00000553029 WDR97A6NE52 1622 aa12.1□□□□□ -0.47
LINC02406-201ENST00000553029 LMTK3Q96Q04 1460 aa12.09□□□□□ -0.47
LINC02406-201ENST00000553029 KIF13AQ9H1H9 1805 aa12.09□□□□□ -0.47
LINC02406-201ENST00000553029 KDM6BO15054 1643 aa12.08□□□□□ -0.48
LINC02406-201ENST00000553029 ABCC10Q5T3U5 1492 aa12.08□□□□□ -0.48
LINC02406-201ENST00000553029 ADGRL1O94910 1474 aa12.05□□□□□ -0.48
LINC02406-201ENST00000553029 CCDC88BA6NC98 1476 aa12.02□□□□□ -0.48
LINC02406-201ENST00000553029 NCBP3Q53F19 620 aaKnown RBP12.01□□□□□ -0.49
LINC02406-201ENST00000553029 SOCS7O14512 581 aa12□□□□□ -0.49
LINC02406-201ENST00000553029 CEP170Q5SW79 1584 aa12□□□□□ -0.49
LINC02406-201ENST00000553029 FGD5Q6ZNL6 1462 aa11.99□□□□□ -0.49
LINC02406-201ENST00000553029 DIP2BQ9P265 1576 aa11.98□□□□□ -0.49
LINC02406-201ENST00000553029 MAPKBP1O60336 1514 aa11.97□□□□□ -0.49
LINC02406-201ENST00000553029 NPM1P06748 294 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC02406-201ENST00000553029 NPM3O75607 178 aaKnown RBP11.95□□□□□ -0.5
LINC02406-201ENST00000553029 NUP160Q12769 1436 aa11.94□□□□□ -0.5
LINC02406-201ENST00000553029 GRIN2AQ12879 1464 aa11.94□□□□□ -0.5
LINC02406-201ENST00000553029 ILDR2Q71H61 639 aa11.92□□□□□ -0.5
LINC02406-201ENST00000553029 DCAF8L1A6NGE4 600 aa11.9□□□□□ -0.5
LINC02406-201ENST00000553029 SHROOM2Q13796 1616 aa11.89□□□□□ -0.51
LINC02406-201ENST00000553029 PRG4Q92954 1404 aaPredicted RBP11.88□□□□□ -0.51
LINC02406-201ENST00000553029 PBRM1Q86U86 1689 aa11.87□□□□□ -0.51
LINC02406-201ENST00000553029 DISP3Q9P2K9 1392 aa11.87□□□□□ -0.51
LINC02406-201ENST00000553029 KCNA4P22459 653 aa11.84□□□□□ -0.51
LINC02406-201ENST00000553029 CUX1P39880 1505 aa11.84□□□□□ -0.51
LINC02406-201ENST00000553029 ABCA5Q8WWZ7 1642 aa11.82□□□□□ -0.52
LINC02406-201ENST00000553029 ABCA10Q8WWZ4 1543 aa11.81□□□□□ -0.52
LINC02406-201ENST00000553029 ADAMTS12P58397 1594 aa11.81□□□□□ -0.52
LINC02406-201ENST00000553029 JPH4Q96JJ6 628 aa11.8□□□□□ -0.52
LINC02406-201ENST00000553029 ADCY10Q96PN6 1610 aa11.79□□□□□ -0.52
LINC02406-201ENST00000553029 TSPOAP1O95153 1857 aa11.79□□□□□ -0.52
LINC02406-201ENST00000553029 FHAD1B1AJZ9 1412 aa11.78□□□□□ -0.52
LINC02406-201ENST00000553029 RNF39Q9H2S5 420 aa11.77□□□□□ -0.53
LINC02406-201ENST00000553029 TOP2BQ02880 1626 aa11.77□□□□□ -0.53
LINC02406-201ENST00000553029 COL17A1Q9UMD9 1497 aaPredicted RBP11.76□□□□□ -0.53
LINC02406-201ENST00000553029 GLI2P10070 1586 aa11.7□□□□□ -0.54
LINC02406-201ENST00000553029 PPRC1Q5VV67 1664 aaKnown RBP11.69□□□□□ -0.54
LINC02406-201ENST00000553029 PLB1Q6P1J6 1458 aa11.68□□□□□ -0.54
LINC02406-201ENST00000553029 TEX14Q8IWB6 1497 aa11.68□□□□□ -0.54
LINC02406-201ENST00000553029 ASXL2Q76L83 1435 aa11.68□□□□□ -0.54
LINC02406-201ENST00000553029 SPATA31D1Q6ZQQ2 1576 aa11.67□□□□□ -0.54
LINC02406-201ENST00000553029 RUSC2Q8N2Y8 1516 aa11.66□□□□□ -0.54
LINC02406-201ENST00000553029 CERKQ8TCT0 537 aa11.66□□□□□ -0.54
LINC02406-201ENST00000553029 ERICH3Q5RHP9 1530 aa11.64□□□□□ -0.55
LINC02406-201ENST00000553029 ABCC2Q92887 1545 aa11.64□□□□□ -0.55
LINC02406-201ENST00000553029 WRNQ14191 1432 aaPredicted RBP eCLIP11.63□□□□□ -0.55
LINC02406-201ENST00000553029 PCF11O94913 1555 aaKnown RBP11.62□□□□□ -0.55
LINC02406-201ENST00000553029 CACNB1Q02641 598 aaPredicted RBP11.62□□□□□ -0.55
LINC02406-201ENST00000553029 PTPRMP28827 1452 aa11.62□□□□□ -0.55
LINC02406-201ENST00000553029 PTPRGP23470 1445 aa11.6□□□□□ -0.55
LINC02406-201ENST00000553029 EPRSP07814 1512 aaKnown RBP11.59□□□□□ -0.55
LINC02406-201ENST00000553029 MAP3K4Q9Y6R4 1608 aa11.57□□□□□ -0.56
LINC02406-201ENST00000553029 C1QBPQ07021 282 aaKnown RBP11.56□□□□□ -0.56
LINC02406-201ENST00000553029 TTBK1Q5TCY1 1321 aaPredicted RBP11.55□□□□□ -0.56
LINC02406-201ENST00000553029 KIAA0586Q9BVV6 1533 aa11.55□□□□□ -0.56
LINC02406-201ENST00000553029 KIF21BO75037 1637 aa11.53□□□□□ -0.56
LINC02406-201ENST00000553029 UHRF1BP1LA0JNW5 1464 aa11.52□□□□□ -0.56
LINC02406-201ENST00000553029 HSPA2P54652 639 aa11.52□□□□□ -0.57
LINC02406-201ENST00000553029 TNIKQ9UKE5 1360 aa11.51□□□□□ -0.57
LINC02406-201ENST00000553029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINC02406-201ENST00000553029 ADAMTSL3P82987 1691 aa11.49□□□□□ -0.57
LINC02406-201ENST00000553029 UACAQ9BZF9 1416 aa11.48□□□□□ -0.57
LINC02406-201ENST00000553029 MAGI3Q5TCQ9 1506 aa11.47□□□□□ -0.57
LINC02406-201ENST00000553029 KDM5BQ9UGL1 1544 aa11.47□□□□□ -0.57
LINC02406-201ENST00000553029 CARMIL2Q6F5E8 1435 aa11.47□□□□□ -0.57
LINC02406-201ENST00000553029 CUL7Q14999 1698 aa11.46□□□□□ -0.57
LINC02406-201ENST00000553029 CD109Q6YHK3 1445 aa11.45□□□□□ -0.58
LINC02406-201ENST00000553029 WDR7Q9Y4E6 1490 aa11.44□□□□□ -0.58
LINC02406-201ENST00000553029 SLC4A2P04920 1241 aa11.42□□□□□ -0.58
LINC02406-201ENST00000553029 MADDQ8WXG6 1647 aa11.42□□□□□ -0.58
LINC02406-201ENST00000553029 ARID4BQ4LE39 1312 aaPredicted RBP11.4□□□□□ -0.58
LINC02406-201ENST00000553029 U3KPZ7 1027 aaPredicted RBP11.4□□□□□ -0.58
LINC02406-201ENST00000553029 BIVM-ERCC5R4GMW8 1640 aa11.39□□□□□ -0.59
LINC02406-201ENST00000553029 ARAP3Q8WWN8 1544 aa11.39□□□□□ -0.59
LINC02406-201ENST00000553029 ZCCHC11Q5TAX3 1644 aaKnown RBP11.38□□□□□ -0.59
LINC02406-201ENST00000553029 BCORL1Q5H9F3 1711 aa11.38□□□□□ -0.59
LINC02406-201ENST00000553029 CFAP43Q8NDM7 1665 aa11.34□□□□□ -0.59
LINC02406-201ENST00000553029 YEATS2Q9ULM3 1422 aa11.34□□□□□ -0.59
LINC02406-201ENST00000553029 KCNH8Q96L42 1107 aa11.33□□□□□ -0.6
LINC02406-201ENST00000553029 IGF1RP08069 1367 aa11.32□□□□□ -0.6
LINC02406-201ENST00000553029 RIMS1Q86UR5 1692 aaKnown RBP11.32□□□□□ -0.6
LINC02406-201ENST00000553029 PHLDB1Q86UU1 1377 aa11.31□□□□□ -0.6
LINC02406-201ENST00000553029 DISP1Q96F81 1524 aa11.31□□□□□ -0.6
LINC02406-201ENST00000553029 RAPGEF3O95398 923 aa11.31□□□□□ -0.6
LINC02406-201ENST00000553029 IQSEC2Q5JU85 1478 aa11.3□□□□□ -0.6
LINC02406-201ENST00000553029 IQGAP2Q13576 1575 aa11.29□□□□□ -0.6
LINC02406-201ENST00000553029 POGZQ7Z3K3 1410 aa11.27□□□□□ -0.6
LINC02406-201ENST00000553029 KIF27Q86VH2 1401 aa11.25□□□□□ -0.61
LINC02406-201ENST00000553029 ARHGEF40Q8TER5 1519 aa11.25□□□□□ -0.61
LINC02406-201ENST00000553029 CARMIL1Q5VZK9 1371 aa11.24□□□□□ -0.61
LINC02406-201ENST00000553029 PTPRTO14522 1441 aa11.24□□□□□ -0.61
LINC02406-201ENST00000553029 FANCAO15360 1455 aa11.24□□□□□ -0.61
LINC02406-201ENST00000553029 NEO1Q92859 1461 aa11.23□□□□□ -0.61
LINC02406-201ENST00000553029 LTBP4Q8N2S1 1624 aa11.23□□□□□ -0.61
LINC02406-201ENST00000553029 MED1Q15648 1581 aaPredicted RBP11.22□□□□□ -0.61
LINC02406-201ENST00000553029 FRMPD1Q5SYB0 1578 aa11.21□□□□□ -0.61
LINC02406-201ENST00000553029 UGGT2Q9NYU1 1516 aa11.21□□□□□ -0.61
LINC02406-201ENST00000553029 UBAP1LF5GYI3 381 aa11.21□□□□□ -0.61
LINC02406-201ENST00000553029 KIAA0556O60303 1618 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms