RNA–Protein interactions for RNA: ENST00000548387.1

ACSS3-205, Transcript of acyl-CoA synthetase short chain family member 3, humanhuman

TSL 2

Gene ACSS3, Length 741 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3-205ENST00000548387 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
ACSS3-205ENST00000548387 HAP1P54257 671 aaPredicted RBP14.4□□□□□ -0.1
ACSS3-205ENST00000548387 RNF216Q9NWF9 866 aaPredicted RBP14.38□□□□□ -0.11
ACSS3-205ENST00000548387 SNAPC4Q5SXM2 1469 aa14.37□□□□□ -0.11
ACSS3-205ENST00000548387 MAGI1Q96QZ7 1491 aaPredicted RBP14.37□□□□□ -0.11
ACSS3-205ENST00000548387 FBLN2P98095 1184 aa14.36□□□□□ -0.11
ACSS3-205ENST00000548387 GRIN2BQ13224 1484 aa14.36□□□□□ -0.11
ACSS3-205ENST00000548387 ABCA10Q8WWZ4 1543 aa14.32□□□□□ -0.12
ACSS3-205ENST00000548387 SYNJ2O15056 1496 aa14.31□□□□□ -0.12
ACSS3-205ENST00000548387 GAPVD1Q14C86 1478 aa14.31□□□□□ -0.12
ACSS3-205ENST00000548387 CLASP1Q7Z460 1538 aa14.31□□□□□ -0.12
ACSS3-205ENST00000548387 CHMP7Q8WUX9 453 aaPredicted RBP14.3□□□□□ -0.12
ACSS3-205ENST00000548387 ABCA5Q8WWZ7 1642 aa14.3□□□□□ -0.12
ACSS3-205ENST00000548387 ARAP1Q96P48 1450 aa14.29□□□□□ -0.12
ACSS3-205ENST00000548387 SYNJ1O43426 1573 aa14.29□□□□□ -0.12
ACSS3-205ENST00000548387 PBRM1Q86U86 1689 aa14.29□□□□□ -0.12
ACSS3-205ENST00000548387 MYCNP04198 464 aaPredicted RBP14.28□□□□□ -0.12
ACSS3-205ENST00000548387 CYB5RLQ6IPT4 315 aa14.28□□□□□ -0.12
ACSS3-205ENST00000548387 WRNQ14191 1432 aaPredicted RBP eCLIP14.27□□□□□ -0.12
ACSS3-205ENST00000548387 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
ACSS3-205ENST00000548387 BIVM-ERCC5R4GMW8 1640 aa14.26□□□□□ -0.13
ACSS3-205ENST00000548387 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
ACSS3-205ENST00000548387 TPRNQ4KMQ1 711 aa14.24□□□□□ -0.13
ACSS3-205ENST00000548387 VSIG10Q8N0Z9 540 aa14.24□□□□□ -0.13
ACSS3-205ENST00000548387 GRIN2AQ12879 1464 aa14.17□□□□□ -0.14
ACSS3-205ENST00000548387 ADAMTS12P58397 1594 aa14.17□□□□□ -0.14
ACSS3-205ENST00000548387 ERICH3Q5RHP9 1530 aa14.15□□□□□ -0.14
ACSS3-205ENST00000548387 MSH5O43196 834 aa14.15□□□□□ -0.14
ACSS3-205ENST00000548387 DAXXQ9UER7 740 aaPredicted RBP14.15□□□□□ -0.14
ACSS3-205ENST00000548387 FHAD1B1AJZ9 1412 aa14.14□□□□□ -0.15
ACSS3-205ENST00000548387 NUP160Q12769 1436 aa14.14□□□□□ -0.15
ACSS3-205ENST00000548387 CEP170Q5SW79 1584 aa14.11□□□□□ -0.15
ACSS3-205ENST00000548387 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
ACSS3-205ENST00000548387 TIMELESSQ9UNS1 1208 aa14.07□□□□□ -0.16
ACSS3-205ENST00000548387 SHROOM2Q13796 1616 aa14.07□□□□□ -0.16
ACSS3-205ENST00000548387 ERCC6L2Q5T890 1561 aa14.05□□□□□ -0.16
ACSS3-205ENST00000548387 KDM2AQ9Y2K7 1162 aa14.03□□□□□ -0.16
ACSS3-205ENST00000548387 HOXD11P31277 338 aaPredicted RBP14.02□□□□□ -0.17
ACSS3-205ENST00000548387 RUSC2Q8N2Y8 1516 aa13.98□□□□□ -0.17
ACSS3-205ENST00000548387 KIF27Q86VH2 1401 aa13.98□□□□□ -0.17
ACSS3-205ENST00000548387 JPH4Q96JJ6 628 aa13.97□□□□□ -0.17
ACSS3-205ENST00000548387 PRG4Q92954 1404 aaPredicted RBP13.97□□□□□ -0.17
ACSS3-205ENST00000548387 IGF1RP08069 1367 aa13.96□□□□□ -0.17
ACSS3-205ENST00000548387 CUL7Q14999 1698 aa13.95□□□□□ -0.18
ACSS3-205ENST00000548387 ARXQ96QS3 562 aa13.95□□□□□ -0.18
ACSS3-205ENST00000548387 FBXO3Q9UK99 471 aa13.93□□□□□ -0.18
ACSS3-205ENST00000548387 ATF5Q9Y2D1 282 aaPredicted RBP13.92□□□□□ -0.18
ACSS3-205ENST00000548387 KIAA0586Q9BVV6 1533 aa13.91□□□□□ -0.18
ACSS3-205ENST00000548387 TULP1O00294 542 aaPredicted RBP13.9□□□□□ -0.18
ACSS3-205ENST00000548387 CARMIL1Q5VZK9 1371 aa13.86□□□□□ -0.19
ACSS3-205ENST00000548387 PKD2Q13563 968 aa13.86□□□□□ -0.19
ACSS3-205ENST00000548387 MAPKBP1O60336 1514 aa13.81□□□□□ -0.2
ACSS3-205ENST00000548387 VASPP50552 380 aaPredicted RBP13.81□□□□□ -0.2
ACSS3-205ENST00000548387 ADCY10Q96PN6 1610 aa13.8□□□□□ -0.2
ACSS3-205ENST00000548387 KIF13AQ9H1H9 1805 aa13.8□□□□□ -0.2
ACSS3-205ENST00000548387 NPM1P06748 294 aaKnown RBP eCLIP13.79□□□□□ -0.2
ACSS3-205ENST00000548387 ABCC10Q5T3U5 1492 aa13.78□□□□□ -0.2
ACSS3-205ENST00000548387 IQGAP2Q13576 1575 aa13.77□□□□□ -0.21
ACSS3-205ENST00000548387 CARMIL2Q6F5E8 1435 aa13.77□□□□□ -0.21
ACSS3-205ENST00000548387 IFNLR1Q8IU57 520 aaPredicted RBP13.77□□□□□ -0.21
ACSS3-205ENST00000548387 PTPRGP23470 1445 aa13.76□□□□□ -0.21
ACSS3-205ENST00000548387 RAPGEF2Q9Y4G8 1499 aa13.75□□□□□ -0.21
ACSS3-205ENST00000548387 TNIKQ9UKE5 1360 aa13.75□□□□□ -0.21
ACSS3-205ENST00000548387 DMRT2Q9Y5R5 561 aa13.75□□□□□ -0.21
ACSS3-205ENST00000548387 BBXQ8WY36 941 aaPredicted RBP13.74□□□□□ -0.21
ACSS3-205ENST00000548387 FAM69CQ0P6D2 419 aa13.73□□□□□ -0.21
ACSS3-205ENST00000548387 GTF3C3Q9Y5Q9 886 aa13.73□□□□□ -0.21
ACSS3-205ENST00000548387 DIP2BQ9P265 1576 aa13.73□□□□□ -0.21
ACSS3-205ENST00000548387 PROM2Q8N271 834 aa13.72□□□□□ -0.21
ACSS3-205ENST00000548387 DISP1Q96F81 1524 aa13.71□□□□□ -0.21
ACSS3-205ENST00000548387 UGGT2Q9NYU1 1516 aa13.71□□□□□ -0.21
ACSS3-205ENST00000548387 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.7□□□□□ -0.22
ACSS3-205ENST00000548387 ABCC2Q92887 1545 aa13.69□□□□□ -0.22
ACSS3-205ENST00000548387 UHRF1BP1LA0JNW5 1464 aa13.69□□□□□ -0.22
ACSS3-205ENST00000548387 PAXIP1Q6ZW49 1069 aaPredicted RBP13.68□□□□□ -0.22
ACSS3-205ENST00000548387 UACAQ9BZF9 1416 aa13.66□□□□□ -0.22
ACSS3-205ENST00000548387 KIAA0556O60303 1618 aa13.64□□□□□ -0.23
ACSS3-205ENST00000548387 PLB1Q6P1J6 1458 aa13.64□□□□□ -0.23
ACSS3-205ENST00000548387 PRXQ9BXM0 1461 aa13.64□□□□□ -0.23
ACSS3-205ENST00000548387 TTBK1Q5TCY1 1321 aaPredicted RBP13.64□□□□□ -0.23
ACSS3-205ENST00000548387 ASXL2Q76L83 1435 aa13.63□□□□□ -0.23
ACSS3-205ENST00000548387 CTTNBP2Q8WZ74 1663 aa13.63□□□□□ -0.23
ACSS3-205ENST00000548387 KDM5BQ9UGL1 1544 aa13.62□□□□□ -0.23
ACSS3-205ENST00000548387 GLI2P10070 1586 aa13.62□□□□□ -0.23
ACSS3-205ENST00000548387 SPDYE4A6NLX3 237 aa13.61□□□□□ -0.23
ACSS3-205ENST00000548387 ERICH6Q7L0X2 663 aa13.61□□□□□ -0.23
ACSS3-205ENST00000548387 CFAP44Q96MT7 982 aa13.61□□□□□ -0.23
ACSS3-205ENST00000548387 KDM6BO15054 1643 aa13.6□□□□□ -0.23
ACSS3-205ENST00000548387 GOLGA3Q08378 1498 aa13.59□□□□□ -0.23
ACSS3-205ENST00000548387 TSPOAP1O95153 1857 aa13.57□□□□□ -0.24
ACSS3-205ENST00000548387 TSHZ2Q9NRE2 1034 aa13.57□□□□□ -0.24
ACSS3-205ENST00000548387 ZCCHC11Q5TAX3 1644 aaKnown RBP13.57□□□□□ -0.24
ACSS3-205ENST00000548387 HOMEZQ8IX15 550 aa13.56□□□□□ -0.24
ACSS3-205ENST00000548387 EPRSP07814 1512 aaKnown RBP13.55□□□□□ -0.24
ACSS3-205ENST00000548387 PPRC1Q5VV67 1664 aaKnown RBP13.55□□□□□ -0.24
ACSS3-205ENST00000548387 ABCA8O94911 1581 aa13.54□□□□□ -0.24
ACSS3-205ENST00000548387 MAP3K4Q9Y6R4 1608 aa13.53□□□□□ -0.24
ACSS3-205ENST00000548387 WDR7Q9Y4E6 1490 aa13.51□□□□□ -0.25
ACSS3-205ENST00000548387 EEA1Q15075 1411 aa13.51□□□□□ -0.25
ACSS3-205ENST00000548387 TMEM132AQ24JP5 1023 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms